RNA–Protein interactions for RNA: ENST00000532840.5

C11orf49-219, Transcript of chromosome 11 open reading frame 49, humanhuman

TSL 2

Gene C11orf49, Length 719 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf49-219ENST00000532840 NISCHQ9Y2I1 1504 aa21.36■■□□□ 1.01
C11orf49-219ENST00000532840 AEBP2Q6ZN18 517 aaPredicted RBP19.41■□□□□ 0.7
C11orf49-219ENST00000532840 CHIC1Q5VXU3 224 aa18.86■□□□□ 0.61
C11orf49-219ENST00000532840 CCDC180Q9P1Z9 1646 aa18.85■□□□□ 0.61
C11orf49-219ENST00000532840 ABCC9O60706 1549 aa18.44■□□□□ 0.54
C11orf49-219ENST00000532840 ZCCHC6Q5VYS8 1495 aaKnown RBP17.82■□□□□ 0.44
C11orf49-219ENST00000532840 DCAF8L2P0C7V8 631 aa17.77■□□□□ 0.44
C11orf49-219ENST00000532840 NACADO15069 1562 aa17.72■□□□□ 0.43
C11orf49-219ENST00000532840 RB1CC1Q8TDY2 1594 aa17.69■□□□□ 0.42
C11orf49-219ENST00000532840 MYO15BQ96JP2 1530 aa17.67■□□□□ 0.42
C11orf49-219ENST00000532840 DCAF1Q9Y4B6 1507 aa17.64■□□□□ 0.41
C11orf49-219ENST00000532840 UNC13AQ9UPW8 1703 aa17.38■□□□□ 0.37
C11orf49-219ENST00000532840 BICRAQ9NZM4 1560 aa17.29■□□□□ 0.36
C11orf49-219ENST00000532840 PABPN1Q86U42 306 aaKnown RBP eCLIP17.29■□□□□ 0.36
C11orf49-219ENST00000532840 SCRIBQ14160 1630 aa17.25■□□□□ 0.35
C11orf49-219ENST00000532840 DNAJC5BQ9UF47 199 aa16.98■□□□□ 0.31
C11orf49-219ENST00000532840 SHROOM4Q9ULL8 1493 aa16.95■□□□□ 0.3
C11orf49-219ENST00000532840 EIF4G1Q04637 1599 aaKnown RBP16.75■□□□□ 0.27
C11orf49-219ENST00000532840 CECR2Q9BXF3 1484 aa16.71■□□□□ 0.27
C11orf49-219ENST00000532840 CC2D2AQ9P2K1 1620 aa16.67■□□□□ 0.26
C11orf49-219ENST00000532840 SENP3Q9H4L4 574 aaPredicted RBP16.6■□□□□ 0.25
C11orf49-219ENST00000532840 SMARCA4P51532 1647 aa16.52■□□□□ 0.24
C11orf49-219ENST00000532840 MROH2BQ7Z745 1585 aa16.51■□□□□ 0.23
C11orf49-219ENST00000532840 PHF23Q9BUL5 403 aaPredicted RBP16.5■□□□□ 0.23
C11orf49-219ENST00000532840 BAZ1AQ9NRL2 1556 aaPredicted RBP16.48■□□□□ 0.23
C11orf49-219ENST00000532840 ATAD2BQ9ULI0 1458 aa16.45■□□□□ 0.22
C11orf49-219ENST00000532840 NCAPD3P42695 1498 aa16.42■□□□□ 0.22
C11orf49-219ENST00000532840 PEG3Q9GZU2 1588 aa16.38■□□□□ 0.21
C11orf49-219ENST00000532840 RSF1Q96T23 1441 aaPredicted RBP16.36■□□□□ 0.21
C11orf49-219ENST00000532840 SMARCA2P51531 1590 aa16.34■□□□□ 0.21
C11orf49-219ENST00000532840 WIZO95785 1651 aa16.3■□□□□ 0.2
C11orf49-219ENST00000532840 HMGXB3Q12766 1538 aa16.29■□□□□ 0.2
C11orf49-219ENST00000532840 BAZ1BQ9UIG0 1483 aaKnown RBP16.24■□□□□ 0.19
C11orf49-219ENST00000532840 TOP2AP11388 1531 aaKnown RBP16.09■□□□□ 0.17
C11orf49-219ENST00000532840 NESP48681 1621 aa16.03■□□□□ 0.16
C11orf49-219ENST00000532840 SUPT5HO00267 1087 aaKnown RBP15.98■□□□□ 0.15
C11orf49-219ENST00000532840 CCDC88BA6NC98 1476 aa15.97■□□□□ 0.15
C11orf49-219ENST00000532840 CADPSQ9ULU8 1353 aa15.93■□□□□ 0.14
C11orf49-219ENST00000532840 LAMC3Q9Y6N6 1575 aa15.89■□□□□ 0.13
C11orf49-219ENST00000532840 CFTRP13569 1480 aa15.87■□□□□ 0.13
C11orf49-219ENST00000532840 ERCC6Q03468 1493 aa15.78■□□□□ 0.12
C11orf49-219ENST00000532840 PDS5BQ9NTI5 1447 aa15.77■□□□□ 0.12
C11orf49-219ENST00000532840 KIF21AQ7Z4S6 1674 aa15.77■□□□□ 0.12
C11orf49-219ENST00000532840 FANCD2Q9BXW9 1451 aa15.72■□□□□ 0.11
C11orf49-219ENST00000532840 THOC2Q8NI27 1593 aaKnown RBP15.7■□□□□ 0.1
C11orf49-219ENST00000532840 PRDM2Q13029 1718 aa15.65■□□□□ 0.1
C11orf49-219ENST00000532840 CEP164Q9UPV0 1460 aa15.65■□□□□ 0.1
C11orf49-219ENST00000532840 MRC2Q9UBG0 1479 aa15.63■□□□□ 0.09
C11orf49-219ENST00000532840 URB2Q14146 1524 aaKnown RBP15.62■□□□□ 0.09
C11orf49-219ENST00000532840 CUX2O14529 1486 aa15.6■□□□□ 0.09
C11orf49-219ENST00000532840 WDR62O43379 1518 aa15.6■□□□□ 0.09
C11orf49-219ENST00000532840 TOPBP1Q92547 1522 aa15.51■□□□□ 0.07
C11orf49-219ENST00000532840 CUX1P39880 1505 aa15.46■□□□□ 0.07
C11orf49-219ENST00000532840 DNMBPQ6XZF7 1577 aa15.45■□□□□ 0.06
C11orf49-219ENST00000532840 ABCC8Q09428 1581 aa15.41■□□□□ 0.06
C11orf49-219ENST00000532840 POLA1P09884 1462 aaPredicted RBP15.4■□□□□ 0.06
C11orf49-219ENST00000532840 RAD54L2Q9Y4B4 1467 aa15.36■□□□□ 0.05
C11orf49-219ENST00000532840 FGD5Q6ZNL6 1462 aa15.35■□□□□ 0.05
C11orf49-219ENST00000532840 ZNF608Q9ULD9 1512 aaPredicted RBP15.35■□□□□ 0.05
C11orf49-219ENST00000532840 FOXD1Q16676 465 aa15.35■□□□□ 0.05
C11orf49-219ENST00000532840 TARBP1Q13395 1621 aaKnown RBP15.35■□□□□ 0.05
C11orf49-219ENST00000532840 WRNQ14191 1432 aaPredicted RBP eCLIP15.34■□□□□ 0.05
C11orf49-219ENST00000532840 SYNJ1O43426 1573 aa15.34■□□□□ 0.05
C11orf49-219ENST00000532840 IFT140Q96RY7 1462 aa15.33■□□□□ 0.05
C11orf49-219ENST00000532840 SOGA1O94964 1423 aa15.31■□□□□ 0.04
C11orf49-219ENST00000532840 TOP2BQ02880 1626 aa15.3■□□□□ 0.04
C11orf49-219ENST00000532840 BIVM-ERCC5R4GMW8 1640 aa15.29■□□□□ 0.04
C11orf49-219ENST00000532840 AQRO60306 1485 aaKnown RBP eCLIP15.27■□□□□ 0.03
C11orf49-219ENST00000532840 PLPPR3Q6T4P5 718 aa15.26■□□□□ 0.03
C11orf49-219ENST00000532840 TDRD9Q8NDG6 1382 aaKnown RBP15.24■□□□□ 0.03
C11orf49-219ENST00000532840 WDR97A6NE52 1622 aa15.21■□□□□ 0.03
C11orf49-219ENST00000532840 EIF4G3O43432 1585 aaKnown RBP15.21■□□□□ 0.03
C11orf49-219ENST00000532840 ABCA10Q8WWZ4 1543 aa15.21■□□□□ 0.03
C11orf49-219ENST00000532840 ABCA5Q8WWZ7 1642 aa15.14■□□□□ 0.01
C11orf49-219ENST00000532840 GAPVD1Q14C86 1478 aa15.13■□□□□ 0.01
C11orf49-219ENST00000532840 GRIN2BQ13224 1484 aa15.09■□□□□ 0.01
C11orf49-219ENST00000532840 DNAJC5Q9H3Z4 198 aa15.09■□□□□ 0.01
C11orf49-219ENST00000532840 SNAPC4Q5SXM2 1469 aa15.08■□□□□ 0
C11orf49-219ENST00000532840 PBRM1Q86U86 1689 aa15.04■□□□□ -0
C11orf49-219ENST00000532840 TRIM41Q8WV44 630 aa15.04■□□□□ -0
C11orf49-219ENST00000532840 RUSC2Q8N2Y8 1516 aa15.03■□□□□ -0
C11orf49-219ENST00000532840 MAGI1Q96QZ7 1491 aaPredicted RBP15.02■□□□□ -0
C11orf49-219ENST00000532840 IGF1RP08069 1367 aa15.02■□□□□ -0
C11orf49-219ENST00000532840 OSCARQ8IYS5 282 aa15.01□□□□□ -0.01
C11orf49-219ENST00000532840 CHD1O14646 1710 aa15□□□□□ -0.01
C11orf49-219ENST00000532840 ERICH3Q5RHP9 1530 aa14.99□□□□□ -0.01
C11orf49-219ENST00000532840 KIF27Q86VH2 1401 aa14.99□□□□□ -0.01
C11orf49-219ENST00000532840 SYNJ2O15056 1496 aa14.98□□□□□ -0.01
C11orf49-219ENST00000532840 FBLN2P98095 1184 aa14.98□□□□□ -0.01
C11orf49-219ENST00000532840 ADAMTS12P58397 1594 aa14.96□□□□□ -0.01
C11orf49-219ENST00000532840 CHMP7Q8WUX9 453 aaPredicted RBP14.95□□□□□ -0.02
C11orf49-219ENST00000532840 FHAD1B1AJZ9 1412 aa14.94□□□□□ -0.02
C11orf49-219ENST00000532840 GRIN2AQ12879 1464 aa14.91□□□□□ -0.02
C11orf49-219ENST00000532840 CARMIL1Q5VZK9 1371 aa14.88□□□□□ -0.03
C11orf49-219ENST00000532840 NUP160Q12769 1436 aa14.88□□□□□ -0.03
C11orf49-219ENST00000532840 CLASP1Q7Z460 1538 aa14.87□□□□□ -0.03
C11orf49-219ENST00000532840 CEP170Q5SW79 1584 aa14.86□□□□□ -0.03
C11orf49-219ENST00000532840 CUL7Q14999 1698 aa14.83□□□□□ -0.04
C11orf49-219ENST00000532840 PRXQ9BXM0 1461 aa14.81□□□□□ -0.04
C11orf49-219ENST00000532840 CSRNP3Q8WYN3 585 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms