RNA–Protein interactions for RNA: ENST00000532776.5

RELA-218, Transcript of RELA proto-oncogene, NF-kB subunit, humanhuman

TSL 2

Gene RELA, Length 602 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RELA-218ENST00000532776 NISCHQ9Y2I1 1504 aa40.4■■■■■ 4.06
RELA-218ENST00000532776 CCDC180Q9P1Z9 1646 aa36.26■■■■□ 3.4
RELA-218ENST00000532776 ABCC9O60706 1549 aa36.13■■■■□ 3.38
RELA-218ENST00000532776 RB1CC1Q8TDY2 1594 aa34.45■■■■□ 3.11
RELA-218ENST00000532776 NACADO15069 1562 aa34.25■■■■□ 3.07
RELA-218ENST00000532776 DCAF8L2P0C7V8 631 aa33.96■■■■□ 3.03
RELA-218ENST00000532776 DNAJC5BQ9UF47 199 aa33.88■■■■□ 3.01
RELA-218ENST00000532776 MYO15BQ96JP2 1530 aa33.83■■■■□ 3.01
RELA-218ENST00000532776 UNC13AQ9UPW8 1703 aa33.76■■■□□ 2.99
RELA-218ENST00000532776 PABPN1Q86U42 306 aaKnown RBP eCLIP33.62■■■□□ 2.97
RELA-218ENST00000532776 BICRAQ9NZM4 1560 aa33.49■■■□□ 2.95
RELA-218ENST00000532776 ZCCHC6Q5VYS8 1495 aaKnown RBP33.49■■■□□ 2.95
RELA-218ENST00000532776 DCAF1Q9Y4B6 1507 aa33.4■■■□□ 2.94
RELA-218ENST00000532776 SHROOM4Q9ULL8 1493 aa33.03■■■□□ 2.88
RELA-218ENST00000532776 SCRIBQ14160 1630 aa32.99■■■□□ 2.87
RELA-218ENST00000532776 CC2D2AQ9P2K1 1620 aa32.69■■■□□ 2.82
RELA-218ENST00000532776 EIF4G1Q04637 1599 aaKnown RBP32.63■■■□□ 2.81
RELA-218ENST00000532776 CECR2Q9BXF3 1484 aa32.55■■■□□ 2.8
RELA-218ENST00000532776 NCAPD3P42695 1498 aa31.61■■■□□ 2.65
RELA-218ENST00000532776 SMARCA4P51532 1647 aa31.51■■■□□ 2.63
RELA-218ENST00000532776 ATAD2BQ9ULI0 1458 aa31.51■■■□□ 2.63
RELA-218ENST00000532776 SMARCA2P51531 1590 aa31.43■■■□□ 2.62
RELA-218ENST00000532776 HMGXB3Q12766 1538 aa31.39■■■□□ 2.61
RELA-218ENST00000532776 BAZ1AQ9NRL2 1556 aaPredicted RBP31.34■■■□□ 2.61
RELA-218ENST00000532776 PEG3Q9GZU2 1588 aa31.23■■■□□ 2.59
RELA-218ENST00000532776 BAZ1BQ9UIG0 1483 aaKnown RBP31.19■■■□□ 2.58
RELA-218ENST00000532776 ERCC6Q03468 1493 aa31.17■■■□□ 2.58
RELA-218ENST00000532776 CUX2O14529 1486 aa31.15■■■□□ 2.58
RELA-218ENST00000532776 MROH2BQ7Z745 1585 aa31.13■■■□□ 2.57
RELA-218ENST00000532776 NESP48681 1621 aa31.08■■■□□ 2.57
RELA-218ENST00000532776 DNAJC5Q9H3Z4 198 aa31.07■■■□□ 2.56
RELA-218ENST00000532776 LAMC3Q9Y6N6 1575 aa30.89■■■□□ 2.54
RELA-218ENST00000532776 THOC2Q8NI27 1593 aaKnown RBP30.79■■■□□ 2.52
RELA-218ENST00000532776 WIZO95785 1651 aa30.76■■■□□ 2.51
RELA-218ENST00000532776 KIF21AQ7Z4S6 1674 aa30.71■■■□□ 2.51
RELA-218ENST00000532776 PDS5BQ9NTI5 1447 aa30.67■■■□□ 2.5
RELA-218ENST00000532776 CADPSQ9ULU8 1353 aa30.63■■■□□ 2.49
RELA-218ENST00000532776 RSF1Q96T23 1441 aaPredicted RBP30.48■■■□□ 2.47
RELA-218ENST00000532776 MRC2Q9UBG0 1479 aa30.42■■■□□ 2.46
RELA-218ENST00000532776 WDR62O43379 1518 aa30.37■■■□□ 2.45
RELA-218ENST00000532776 TOP2AP11388 1531 aaKnown RBP30.37■■■□□ 2.45
RELA-218ENST00000532776 CFTRP13569 1480 aa30.31■■■□□ 2.44
RELA-218ENST00000532776 CEP164Q9UPV0 1460 aa30.3■■■□□ 2.44
RELA-218ENST00000532776 FANCD2Q9BXW9 1451 aa30.28■■■□□ 2.44
RELA-218ENST00000532776 PRDM2Q13029 1718 aa30.08■■■□□ 2.41
RELA-218ENST00000532776 URB2Q14146 1524 aaKnown RBP30.05■■■□□ 2.4
RELA-218ENST00000532776 CCDC88BA6NC98 1476 aa30.01■■■□□ 2.4
RELA-218ENST00000532776 TOPBP1Q92547 1522 aa29.73■■■□□ 2.35
RELA-218ENST00000532776 OSCARQ8IYS5 282 aa29.71■■■□□ 2.35
RELA-218ENST00000532776 IFT140Q96RY7 1462 aa29.7■■■□□ 2.35
RELA-218ENST00000532776 ABCC8Q09428 1581 aa29.67■■■□□ 2.34
RELA-218ENST00000532776 ZNF608Q9ULD9 1512 aaPredicted RBP29.66■■■□□ 2.34
RELA-218ENST00000532776 TRIM41Q8WV44 630 aa29.65■■■□□ 2.34
RELA-218ENST00000532776 DNMBPQ6XZF7 1577 aa29.63■■■□□ 2.33
RELA-218ENST00000532776 EIF4G3O43432 1585 aaKnown RBP29.51■■■□□ 2.31
RELA-218ENST00000532776 TARBP1Q13395 1621 aaKnown RBP29.49■■■□□ 2.31
RELA-218ENST00000532776 POLA1P09884 1462 aaPredicted RBP29.42■■■□□ 2.3
RELA-218ENST00000532776 AQRO60306 1485 aaKnown RBP eCLIP29.37■■■□□ 2.291e-9■■■■■ 34.9
RELA-218ENST00000532776 RIMBP3CA6NJZ7 1639 aa29.36■■■□□ 2.29
RELA-218ENST00000532776 RIMBP3BA6NNM3 1639 aa29.36■■■□□ 2.29
RELA-218ENST00000532776 RIMBP3Q9UFD9 1639 aa29.36■■■□□ 2.29
RELA-218ENST00000532776 CHD1O14646 1710 aa29.31■■■□□ 2.28
RELA-218ENST00000532776 RAD54L2Q9Y4B4 1467 aa29.29■■■□□ 2.28
RELA-218ENST00000532776 SOGA1O94964 1423 aa29.27■■■□□ 2.28
RELA-218ENST00000532776 ARHGEF11O15085 1522 aa29.25■■■□□ 2.27
RELA-218ENST00000532776 CUX1P39880 1505 aa29.24■■■□□ 2.27
RELA-218ENST00000532776 FGD5Q6ZNL6 1462 aa29.23■■■□□ 2.27
RELA-218ENST00000532776 TDRD9Q8NDG6 1382 aaKnown RBP29.2■■■□□ 2.26
RELA-218ENST00000532776 WDR97A6NE52 1622 aa29.2■■■□□ 2.26
RELA-218ENST00000532776 FBLN2P98095 1184 aa29.12■■■□□ 2.25
RELA-218ENST00000532776 SUPT5HO00267 1087 aaKnown RBP29.09■■■□□ 2.25
RELA-218ENST00000532776 SNAPC4Q5SXM2 1469 aa29.08■■■□□ 2.25
RELA-218ENST00000532776 MAGI1Q96QZ7 1491 aaPredicted RBP29.03■■■□□ 2.24
RELA-218ENST00000532776 GRIN2BQ13224 1484 aa29.02■■■□□ 2.24
RELA-218ENST00000532776 CYB5RLQ6IPT4 315 aa28.99■■■□□ 2.23
RELA-218ENST00000532776 ARAP1Q96P48 1450 aa28.97■■■□□ 2.23
RELA-218ENST00000532776 CLASP1Q7Z460 1538 aa28.96■■■□□ 2.23
RELA-218ENST00000532776 PBRM1Q86U86 1689 aa28.95■■■□□ 2.22
RELA-218ENST00000532776 CHMP7Q8WUX9 453 aaPredicted RBP28.93■■■□□ 2.22
RELA-218ENST00000532776 ABCA10Q8WWZ4 1543 aa28.93■■■□□ 2.22
RELA-218ENST00000532776 SYNJ2O15056 1496 aa28.92■■■□□ 2.22
RELA-218ENST00000532776 GAPVD1Q14C86 1478 aa28.92■■■□□ 2.22
RELA-218ENST00000532776 SYNJ1O43426 1573 aa28.92■■■□□ 2.22
RELA-218ENST00000532776 ABCA5Q8WWZ7 1642 aa28.9■■■□□ 2.22
RELA-218ENST00000532776 BIVM-ERCC5R4GMW8 1640 aa28.81■■■□□ 2.2
RELA-218ENST00000532776 TOP2BQ02880 1626 aa28.8■■■□□ 2.2
RELA-218ENST00000532776 WRNQ14191 1432 aaPredicted RBP eCLIP28.79■■■□□ 2.2
RELA-218ENST00000532776 ADAMTS12P58397 1594 aa28.66■■■□□ 2.18
RELA-218ENST00000532776 GRIN2AQ12879 1464 aa28.66■■■□□ 2.18
RELA-218ENST00000532776 TRHP20396 242 aaPredicted RBP28.62■■■□□ 2.17
RELA-218ENST00000532776 NUP160Q12769 1436 aa28.57■■■□□ 2.16
RELA-218ENST00000532776 ERICH3Q5RHP9 1530 aa28.57■■■□□ 2.16
RELA-218ENST00000532776 CEP170Q5SW79 1584 aa28.57■■■□□ 2.16
RELA-218ENST00000532776 FHAD1B1AJZ9 1412 aa28.56■■■□□ 2.16
RELA-218ENST00000532776 ERCC6L2Q5T890 1561 aa28.5■■■□□ 2.15
RELA-218ENST00000532776 SHROOM2Q13796 1616 aa28.47■■■□□ 2.15
RELA-218ENST00000532776 RUSC2Q8N2Y8 1516 aa28.26■■■□□ 2.11
RELA-218ENST00000532776 PRG4Q92954 1404 aaPredicted RBP28.26■■■□□ 2.11
RELA-218ENST00000532776 JPH4Q96JJ6 628 aa28.24■■■□□ 2.11
RELA-218ENST00000532776 IGF1RP08069 1367 aa28.2■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 711 ms