RNA–Protein interactions for RNA: ENST00000532690.1

PCNAP4-201, Transcript of proliferating cell nuclear antigen pseudogene 4, humanhuman

BASIC

Gene PCNAP4, Length 730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP4-201ENST00000532690 AEBP2Q6ZN18 517 aaPredicted RBP20.4■□□□□ 0.86
PCNAP4-201ENST00000532690 CHIC1Q5VXU3 224 aa19.38■□□□□ 0.69
PCNAP4-201ENST00000532690 SENP3Q9H4L4 574 aaPredicted RBP17.36■□□□□ 0.37
PCNAP4-201ENST00000532690 PHF23Q9BUL5 403 aaPredicted RBP17.17■□□□□ 0.34
PCNAP4-201ENST00000532690 FOXD1Q16676 465 aa16.21■□□□□ 0.19
PCNAP4-201ENST00000532690 PLPPR3Q6T4P5 718 aa15.5■□□□□ 0.07
PCNAP4-201ENST00000532690 PPP6R1Q9UPN7 881 aa15.2■□□□□ 0.02
PCNAP4-201ENST00000532690 ADRA2BP18089 450 aa15.15■□□□□ 0.02
PCNAP4-201ENST00000532690 PIAS4Q8N2W9 510 aaPredicted RBP15.15■□□□□ 0.02
PCNAP4-201ENST00000532690 MSH5O43196 834 aa15.12■□□□□ 0.01
PCNAP4-201ENST00000532690 POTEDQ86YR6 584 aa14.74□□□□□ -0.05
PCNAP4-201ENST00000532690 NISCHQ9Y2I1 1504 aa14.26□□□□□ -0.13
PCNAP4-201ENST00000532690 MAPK8IP2Q13387 824 aaPredicted RBP13.92□□□□□ -0.18
PCNAP4-201ENST00000532690 SCAF1Q9H7N4 1312 aaKnown RBP13.83□□□□□ -0.2
PCNAP4-201ENST00000532690 DMRT2Q9Y5R5 561 aa13.78□□□□□ -0.2
PCNAP4-201ENST00000532690 PPP4R3CPQ6ZMV5 832 aa13.6□□□□□ -0.23
PCNAP4-201ENST00000532690 CNKSR2Q8WXI2 1034 aa13.33□□□□□ -0.28
PCNAP4-201ENST00000532690 HOXD11P31277 338 aaPredicted RBP13.28□□□□□ -0.28
PCNAP4-201ENST00000532690 DCAF8L1A6NGE4 600 aa13.24□□□□□ -0.29
PCNAP4-201ENST00000532690 RNF216Q9NWF9 866 aaPredicted RBP13.19□□□□□ -0.3
PCNAP4-201ENST00000532690 NCBP3Q53F19 620 aaKnown RBP13.07□□□□□ -0.32
PCNAP4-201ENST00000532690 CACNB1Q02641 598 aaPredicted RBP12.99□□□□□ -0.33
PCNAP4-201ENST00000532690 RNF39Q9H2S5 420 aa12.92□□□□□ -0.34
PCNAP4-201ENST00000532690 NPM3O75607 178 aaKnown RBP12.9□□□□□ -0.34
PCNAP4-201ENST00000532690 DNAJC5BQ9UF47 199 aa12.79□□□□□ -0.36
PCNAP4-201ENST00000532690 C1QBPQ07021 282 aaKnown RBP12.73□□□□□ -0.37
PCNAP4-201ENST00000532690 KCNA4P22459 653 aa12.69□□□□□ -0.38
PCNAP4-201ENST00000532690 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.67□□□□□ -0.38
PCNAP4-201ENST00000532690 CCDC180Q9P1Z9 1646 aa12.6□□□□□ -0.39
PCNAP4-201ENST00000532690 ABCC9O60706 1549 aa12.49□□□□□ -0.41
PCNAP4-201ENST00000532690 U3KPZ7 1027 aaPredicted RBP12.41□□□□□ -0.42
PCNAP4-201ENST00000532690 SLC4A2P04920 1241 aa12.32□□□□□ -0.44
PCNAP4-201ENST00000532690 SPINK5Q9NQ38 1064 aaPredicted RBP12.24□□□□□ -0.45
PCNAP4-201ENST00000532690 CAPN15O75808 1086 aa12.21□□□□□ -0.45
PCNAP4-201ENST00000532690 DSG3P32926 999 aa12.12□□□□□ -0.47
PCNAP4-201ENST00000532690 DCAF8L2P0C7V8 631 aa12.1□□□□□ -0.47
PCNAP4-201ENST00000532690 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.04□□□□□ -0.48
PCNAP4-201ENST00000532690 HNRNPUL2Q1KMD3 747 aaKnown RBP12.04□□□□□ -0.48
PCNAP4-201ENST00000532690 TRHP20396 242 aaPredicted RBP12.03□□□□□ -0.48
PCNAP4-201ENST00000532690 APLP2Q06481 763 aa12.03□□□□□ -0.48
PCNAP4-201ENST00000532690 SAMD1Q6SPF0 538 aaPredicted RBP11.98□□□□□ -0.49
PCNAP4-201ENST00000532690 SLC4A1APQ9BWU0 796 aaKnown RBP11.98□□□□□ -0.49
PCNAP4-201ENST00000532690 ZNF219Q9P2Y4 722 aaPredicted RBP11.97□□□□□ -0.49
PCNAP4-201ENST00000532690 RB1CC1Q8TDY2 1594 aa11.94□□□□□ -0.5
PCNAP4-201ENST00000532690 ABCB7O75027 752 aa11.93□□□□□ -0.5
PCNAP4-201ENST00000532690 NACADO15069 1562 aa11.92□□□□□ -0.5
PCNAP4-201ENST00000532690 MYCNP04198 464 aaPredicted RBP11.91□□□□□ -0.5
PCNAP4-201ENST00000532690 ZCCHC6Q5VYS8 1495 aaKnown RBP11.83□□□□□ -0.52
PCNAP4-201ENST00000532690 MYO15BQ96JP2 1530 aa11.82□□□□□ -0.52
PCNAP4-201ENST00000532690 FOXD4L1Q9NU39 408 aa11.81□□□□□ -0.52
PCNAP4-201ENST00000532690 DCAF1Q9Y4B6 1507 aa11.76□□□□□ -0.53
PCNAP4-201ENST00000532690 PABPN1Q86U42 306 aaKnown RBP eCLIP11.74□□□□□ -0.53
PCNAP4-201ENST00000532690 POLA2Q14181 598 aa11.71□□□□□ -0.53
PCNAP4-201ENST00000532690 ZBTB22O15209 634 aa11.67□□□□□ -0.54
PCNAP4-201ENST00000532690 ATF5Q9Y2D1 282 aaPredicted RBP11.67□□□□□ -0.54
PCNAP4-201ENST00000532690 UNC13AQ9UPW8 1703 aa11.57□□□□□ -0.56
PCNAP4-201ENST00000532690 BICRAQ9NZM4 1560 aa11.56□□□□□ -0.56
PCNAP4-201ENST00000532690 POTEHQ6S545 545 aa11.55□□□□□ -0.56
PCNAP4-201ENST00000532690 SCRIBQ14160 1630 aa11.55□□□□□ -0.56
PCNAP4-201ENST00000532690 RBM42Q9BTD8 480 aaKnown RBP11.54□□□□□ -0.56
PCNAP4-201ENST00000532690 ATXN8OSP0DMR3 200 aa11.43□□□□□ -0.58
PCNAP4-201ENST00000532690 SHROOM4Q9ULL8 1493 aa11.43□□□□□ -0.58
PCNAP4-201ENST00000532690 ZBTB12Q9Y330 459 aaPredicted RBP11.42□□□□□ -0.58
PCNAP4-201ENST00000532690 OSCARQ8IYS5 282 aa11.32□□□□□ -0.6
PCNAP4-201ENST00000532690 CHRDL2Q6WN34 429 aa11.29□□□□□ -0.6
PCNAP4-201ENST00000532690 AKT1S1Q96B36 256 aa11.29□□□□□ -0.6
PCNAP4-201ENST00000532690 EIF4G1Q04637 1599 aaKnown RBP11.27□□□□□ -0.61
PCNAP4-201ENST00000532690 CC2D2AQ9P2K1 1620 aa11.24□□□□□ -0.61
PCNAP4-201ENST00000532690 CECR2Q9BXF3 1484 aa11.22□□□□□ -0.61
PCNAP4-201ENST00000532690 REM2Q8IYK8 340 aaPredicted RBP11.2□□□□□ -0.62
PCNAP4-201ENST00000532690 FBLN2P98095 1184 aa11.18□□□□□ -0.62
PCNAP4-201ENST00000532690 CSRNP3Q8WYN3 585 aa11.17□□□□□ -0.62
PCNAP4-201ENST00000532690 MKRN4PQ13434 485 aaPredicted RBP11.13□□□□□ -0.63
PCNAP4-201ENST00000532690 SPDYE2BA6NHP3 402 aa11.09□□□□□ -0.63
PCNAP4-201ENST00000532690 SPDYE6P0CI01 402 aa11.09□□□□□ -0.63
PCNAP4-201ENST00000532690 SPDYE2Q495Y8 402 aa11.09□□□□□ -0.63
PCNAP4-201ENST00000532690 PITPNM1O00562 1244 aa11.08□□□□□ -0.64
PCNAP4-201ENST00000532690 NCAPD3P42695 1498 aa11.05□□□□□ -0.64
PCNAP4-201ENST00000532690 PIP4P2Q8N4L2 257 aa11.04□□□□□ -0.64
PCNAP4-201ENST00000532690 EHMT2Q96KQ7 1210 aa11.04□□□□□ -0.64
PCNAP4-201ENST00000532690 ATAD2BQ9ULI0 1458 aa11.04□□□□□ -0.64
PCNAP4-201ENST00000532690 BAZ1AQ9NRL2 1556 aaPredicted RBP11.03□□□□□ -0.64
PCNAP4-201ENST00000532690 SMARCA4P51532 1647 aa11.03□□□□□ -0.64
PCNAP4-201ENST00000532690 SMARCA2P51531 1590 aa10.99□□□□□ -0.65
PCNAP4-201ENST00000532690 MROH2BQ7Z745 1585 aa10.99□□□□□ -0.65
PCNAP4-201ENST00000532690 ZNF692Q9BU19 519 aaPredicted RBP10.99□□□□□ -0.65
PCNAP4-201ENST00000532690 FXR2P51116 673 aaKnown RBP eCLIP10.97□□□□□ -0.65
PCNAP4-201ENST00000532690 SSUH2Q9Y2M2 353 aa10.95□□□□□ -0.66
PCNAP4-201ENST00000532690 BAZ1BQ9UIG0 1483 aaKnown RBP10.93□□□□□ -0.66
PCNAP4-201ENST00000532690 HMGXB3Q12766 1538 aa10.92□□□□□ -0.66
PCNAP4-201ENST00000532690 PEG3Q9GZU2 1588 aa10.91□□□□□ -0.66
PCNAP4-201ENST00000532690 CLEC11AQ9Y240 323 aa10.91□□□□□ -0.66
PCNAP4-201ENST00000532690 SPDYE1Q8NFV5 336 aaPredicted RBP10.9□□□□□ -0.66
PCNAP4-201ENST00000532690 RSF1Q96T23 1441 aaPredicted RBP10.89□□□□□ -0.67
PCNAP4-201ENST00000532690 HAX1O00165 279 aa10.84□□□□□ -0.67
PCNAP4-201ENST00000532690 SP7Q8TDD2 431 aaPredicted RBP10.84□□□□□ -0.67
PCNAP4-201ENST00000532690 WIZO95785 1651 aa10.84□□□□□ -0.67
PCNAP4-201ENST00000532690 PRKAR2AP13861 404 aaKnown RBP10.8□□□□□ -0.68
PCNAP4-201ENST00000532690 NESP48681 1621 aa10.77□□□□□ -0.68
PCNAP4-201ENST00000532690 ERCC6Q03468 1493 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms