RNA–Protein interactions for RNA: ENST00000532674.2

RPUSD4-206, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 5

Gene RPUSD4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-206ENST00000532674 NISCHQ9Y2I1 1504 aa47.25■■■■■ 5.16
RPUSD4-206ENST00000532674 ABCC9O60706 1549 aa42.83■■■■■ 4.45
RPUSD4-206ENST00000532674 CCDC180Q9P1Z9 1646 aa42.45■■■■■ 4.39
RPUSD4-206ENST00000532674 RB1CC1Q8TDY2 1594 aa40.61■■■■■ 4.09
RPUSD4-206ENST00000532674 DNAJC5BQ9UF47 199 aa40.5■■■■■ 4.07
RPUSD4-206ENST00000532674 NACADO15069 1562 aa40.27■■■■■ 4.04
RPUSD4-206ENST00000532674 DCAF8L2P0C7V8 631 aa40.15■■■■■ 4.02
RPUSD4-206ENST00000532674 PABPN1Q86U42 306 aaKnown RBP eCLIP39.9■■■■□ 3.98
RPUSD4-206ENST00000532674 MYO15BQ96JP2 1530 aa39.61■■■■□ 3.93
RPUSD4-206ENST00000532674 UNC13AQ9UPW8 1703 aa39.6■■■■□ 3.93
RPUSD4-206ENST00000532674 BICRAQ9NZM4 1560 aa39.42■■■■□ 3.9
RPUSD4-206ENST00000532674 ZCCHC6Q5VYS8 1495 aaKnown RBP39.07■■■■□ 3.85
RPUSD4-206ENST00000532674 DCAF1Q9Y4B6 1507 aa38.99■■■■□ 3.83
RPUSD4-206ENST00000532674 SHROOM4Q9ULL8 1493 aa38.86■■■■□ 3.81
RPUSD4-206ENST00000532674 SCRIBQ14160 1630 aa38.7■■■■□ 3.79
RPUSD4-206ENST00000532674 CC2D2AQ9P2K1 1620 aa38.63■■■■□ 3.78
RPUSD4-206ENST00000532674 CECR2Q9BXF3 1484 aa38.61■■■■□ 3.77
RPUSD4-206ENST00000532674 EIF4G1Q04637 1599 aaKnown RBP38.48■■■■□ 3.75
RPUSD4-206ENST00000532674 DNAJC5Q9H3Z4 198 aa37.41■■■■□ 3.58
RPUSD4-206ENST00000532674 NCAPD3P42695 1498 aa37.21■■■■□ 3.55
RPUSD4-206ENST00000532674 ATAD2BQ9ULI0 1458 aa37.05■■■■□ 3.52
RPUSD4-206ENST00000532674 CUX2O14529 1486 aa37.01■■■■□ 3.52
RPUSD4-206ENST00000532674 ERCC6Q03468 1493 aa37.01■■■■□ 3.51
RPUSD4-206ENST00000532674 SMARCA2P51531 1590 aa36.91■■■■□ 3.5
RPUSD4-206ENST00000532674 SMARCA4P51532 1647 aa36.88■■■■□ 3.5
RPUSD4-206ENST00000532674 HMGXB3Q12766 1538 aa36.85■■■■□ 3.49
RPUSD4-206ENST00000532674 NESP48681 1621 aa36.7■■■■□ 3.47
RPUSD4-206ENST00000532674 BAZ1AQ9NRL2 1556 aaPredicted RBP36.69■■■■□ 3.46
RPUSD4-206ENST00000532674 BAZ1BQ9UIG0 1483 aaKnown RBP36.67■■■■□ 3.46
RPUSD4-206ENST00000532674 PEG3Q9GZU2 1588 aa36.53■■■■□ 3.44
RPUSD4-206ENST00000532674 MROH2BQ7Z745 1585 aa36.4■■■■□ 3.42
RPUSD4-206ENST00000532674 LAMC3Q9Y6N6 1575 aa36.37■■■■□ 3.41
RPUSD4-206ENST00000532674 THOC2Q8NI27 1593 aaKnown RBP36.32■■■■□ 3.4
RPUSD4-206ENST00000532674 PDS5BQ9NTI5 1447 aa36.24■■■■□ 3.39
RPUSD4-206ENST00000532674 KIF21AQ7Z4S6 1674 aa36.14■■■■□ 3.38
RPUSD4-206ENST00000532674 CADPSQ9ULU8 1353 aa36.09■■■■□ 3.37
RPUSD4-206ENST00000532674 WIZO95785 1651 aa35.93■■■■□ 3.34
RPUSD4-206ENST00000532674 MRC2Q9UBG0 1479 aa35.9■■■■□ 3.34
RPUSD4-206ENST00000532674 WDR62O43379 1518 aa35.78■■■■□ 3.32
RPUSD4-206ENST00000532674 CEP164Q9UPV0 1460 aa35.7■■■■□ 3.31
RPUSD4-206ENST00000532674 TRIM41Q8WV44 630 aa35.65■■■■□ 3.3
RPUSD4-206ENST00000532674 FANCD2Q9BXW9 1451 aa35.65■■■■□ 3.3
RPUSD4-206ENST00000532674 CFTRP13569 1480 aa35.59■■■■□ 3.29
RPUSD4-206ENST00000532674 RSF1Q96T23 1441 aaPredicted RBP35.57■■■■□ 3.29
RPUSD4-206ENST00000532674 TOP2AP11388 1531 aaKnown RBP35.46■■■■□ 3.27
RPUSD4-206ENST00000532674 OSCARQ8IYS5 282 aa35.38■■■■□ 3.25
RPUSD4-206ENST00000532674 URB2Q14146 1524 aaKnown RBP35.36■■■■□ 3.25
RPUSD4-206ENST00000532674 CCDC88BA6NC98 1476 aa35.11■■■■□ 3.21
RPUSD4-206ENST00000532674 PRDM2Q13029 1718 aa35.07■■■■□ 3.2
RPUSD4-206ENST00000532674 IFT140Q96RY7 1462 aa35.01■■■■□ 3.19
RPUSD4-206ENST00000532674 ZNF608Q9ULD9 1512 aaPredicted RBP34.98■■■■□ 3.19
RPUSD4-206ENST00000532674 TOPBP1Q92547 1522 aa34.93■■■■□ 3.18
RPUSD4-206ENST00000532674 ABCC8Q09428 1581 aa34.86■■■■□ 3.17
RPUSD4-206ENST00000532674 RIMBP3CA6NJZ7 1639 aa34.82■■■■□ 3.16
RPUSD4-206ENST00000532674 RIMBP3BA6NNM3 1639 aa34.82■■■■□ 3.16
RPUSD4-206ENST00000532674 RIMBP3Q9UFD9 1639 aa34.82■■■■□ 3.16
RPUSD4-206ENST00000532674 DNMBPQ6XZF7 1577 aa34.74■■■■□ 3.15
RPUSD4-206ENST00000532674 EIF4G3O43432 1585 aaKnown RBP34.71■■■■□ 3.15
RPUSD4-206ENST00000532674 ARHGEF11O15085 1522 aa34.71■■■■□ 3.15
RPUSD4-206ENST00000532674 AQRO60306 1485 aaKnown RBP eCLIP34.66■■■■□ 3.144e-7■■■□□ 18.4
RPUSD4-206ENST00000532674 TARBP1Q13395 1621 aaKnown RBP34.61■■■■□ 3.13
RPUSD4-206ENST00000532674 CYB5RLQ6IPT4 315 aa34.57■■■■□ 3.12
RPUSD4-206ENST00000532674 POLA1P09884 1462 aaPredicted RBP34.55■■■■□ 3.12
RPUSD4-206ENST00000532674 FBLN2P98095 1184 aa34.55■■■■□ 3.12
RPUSD4-206ENST00000532674 CHD1O14646 1710 aa34.49■■■■□ 3.11
RPUSD4-206ENST00000532674 RAD54L2Q9Y4B4 1467 aa34.46■■■■□ 3.11
RPUSD4-206ENST00000532674 SOGA1O94964 1423 aa34.45■■■■□ 3.11
RPUSD4-206ENST00000532674 TDRD9Q8NDG6 1382 aaKnown RBP34.42■■■■□ 3.1
RPUSD4-206ENST00000532674 ARAP1Q96P48 1450 aa34.34■■■■□ 3.09
RPUSD4-206ENST00000532674 FGD5Q6ZNL6 1462 aa34.3■■■■□ 3.08
RPUSD4-206ENST00000532674 TRHP20396 242 aaPredicted RBP34.29■■■■□ 3.08
RPUSD4-206ENST00000532674 SNAPC4Q5SXM2 1469 aa34.26■■■■□ 3.07
RPUSD4-206ENST00000532674 CHMP7Q8WUX9 453 aaPredicted RBP34.24■■■■□ 3.07
RPUSD4-206ENST00000532674 WDR97A6NE52 1622 aa34.22■■■■□ 3.07
RPUSD4-206ENST00000532674 CUX1P39880 1505 aa34.21■■■■□ 3.07
RPUSD4-206ENST00000532674 MAGI1Q96QZ7 1491 aaPredicted RBP34.15■■■■□ 3.06
RPUSD4-206ENST00000532674 GRIN2BQ13224 1484 aa34.14■■■■□ 3.06
RPUSD4-206ENST00000532674 CLASP1Q7Z460 1538 aa34.12■■■■□ 3.05
RPUSD4-206ENST00000532674 SYNJ1O43426 1573 aa34.1■■■■□ 3.05
RPUSD4-206ENST00000532674 SYNJ2O15056 1496 aa34.06■■■■□ 3.04
RPUSD4-206ENST00000532674 GAPVD1Q14C86 1478 aa33.99■■■■□ 3.03
RPUSD4-206ENST00000532674 PBRM1Q86U86 1689 aa33.9■■■■□ 3.02
RPUSD4-206ENST00000532674 ABCA10Q8WWZ4 1543 aa33.89■■■■□ 3.02
RPUSD4-206ENST00000532674 SUPT5HO00267 1087 aaKnown RBP33.87■■■■□ 3.01
RPUSD4-206ENST00000532674 ABCA5Q8WWZ7 1642 aa33.82■■■■□ 3
RPUSD4-206ENST00000532674 WRNQ14191 1432 aaPredicted RBP eCLIP33.75■■■□□ 2.99
RPUSD4-206ENST00000532674 GRIN2AQ12879 1464 aa33.69■■■□□ 2.98
RPUSD4-206ENST00000532674 NUP160Q12769 1436 aa33.59■■■□□ 2.97
RPUSD4-206ENST00000532674 ERCC6L2Q5T890 1561 aa33.59■■■□□ 2.97
RPUSD4-206ENST00000532674 ADAMTS12P58397 1594 aa33.58■■■□□ 2.97
RPUSD4-206ENST00000532674 TOP2BQ02880 1626 aa33.57■■■□□ 2.97
RPUSD4-206ENST00000532674 CEP170Q5SW79 1584 aa33.55■■■□□ 2.96
RPUSD4-206ENST00000532674 FHAD1B1AJZ9 1412 aa33.55■■■□□ 2.96
RPUSD4-206ENST00000532674 BIVM-ERCC5R4GMW8 1640 aa33.54■■■□□ 2.96
RPUSD4-206ENST00000532674 AEBP2Q6ZN18 517 aaPredicted RBP33.5■■■□□ 2.95
RPUSD4-206ENST00000532674 ERICH3Q5RHP9 1530 aa33.45■■■□□ 2.95
RPUSD4-206ENST00000532674 SHROOM2Q13796 1616 aa33.42■■■□□ 2.94
RPUSD4-206ENST00000532674 JPH4Q96JJ6 628 aa33.34■■■□□ 2.93
RPUSD4-206ENST00000532674 PRG4Q92954 1404 aaPredicted RBP33.33■■■□□ 2.93
RPUSD4-206ENST00000532674 NPM1P06748 294 aaKnown RBP eCLIP33.12■■■□□ 2.89
Retrieved 100 of 20,778 RNA–protein pairs in 154.3 ms