RNA–Protein interactions for RNA: ENST00000532543.1

EEF1D-244, Transcript of eukaryotic translation elongation factor 1 delta, humanhuman

TSL 3

Gene EEF1D, Length 791 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EEF1D-244ENST00000532543 NISCHQ9Y2I1 1504 aa40.78■■■■■ 4.12
EEF1D-244ENST00000532543 ABCC9O60706 1549 aa37.08■■■■□ 3.53
EEF1D-244ENST00000532543 CCDC180Q9P1Z9 1646 aa36.82■■■■□ 3.49
EEF1D-244ENST00000532543 RB1CC1Q8TDY2 1594 aa35.25■■■■□ 3.23
EEF1D-244ENST00000532543 NACADO15069 1562 aa34.91■■■■□ 3.18
EEF1D-244ENST00000532543 DNAJC5BQ9UF47 199 aa34.88■■■■□ 3.17
EEF1D-244ENST00000532543 DCAF8L2P0C7V8 631 aa34.61■■■■□ 3.13
EEF1D-244ENST00000532543 PABPN1Q86U42 306 aaKnown RBP eCLIP34.42■■■■□ 3.11e-18■□□□□ 9.9
EEF1D-244ENST00000532543 MYO15BQ96JP2 1530 aa34.32■■■■□ 3.08
EEF1D-244ENST00000532543 UNC13AQ9UPW8 1703 aa34.21■■■■□ 3.07
EEF1D-244ENST00000532543 BICRAQ9NZM4 1560 aa34.04■■■■□ 3.04
EEF1D-244ENST00000532543 SHROOM4Q9ULL8 1493 aa33.83■■■■□ 3.01
EEF1D-244ENST00000532543 ZCCHC6Q5VYS8 1495 aaKnown RBP33.75■■■□□ 2.99
EEF1D-244ENST00000532543 DCAF1Q9Y4B6 1507 aa33.73■■■□□ 2.99
EEF1D-244ENST00000532543 CECR2Q9BXF3 1484 aa33.5■■■□□ 2.95
EEF1D-244ENST00000532543 SCRIBQ14160 1630 aa33.47■■■□□ 2.95
EEF1D-244ENST00000532543 CC2D2AQ9P2K1 1620 aa33.47■■■□□ 2.95
EEF1D-244ENST00000532543 EIF4G1Q04637 1599 aaKnown RBP33.34■■■□□ 2.93
EEF1D-244ENST00000532543 DNAJC5Q9H3Z4 198 aa32.46■■■□□ 2.79
EEF1D-244ENST00000532543 CUX2O14529 1486 aa32.23■■■□□ 2.75
EEF1D-244ENST00000532543 ERCC6Q03468 1493 aa32.19■■■□□ 2.74
EEF1D-244ENST00000532543 NCAPD3P42695 1498 aa32.17■■■□□ 2.74
EEF1D-244ENST00000532543 ATAD2BQ9ULI0 1458 aa32.01■■■□□ 2.71
EEF1D-244ENST00000532543 SMARCA2P51531 1590 aa32.01■■■□□ 2.71
EEF1D-244ENST00000532543 HMGXB3Q12766 1538 aa31.96■■■□□ 2.71
EEF1D-244ENST00000532543 SMARCA4P51532 1647 aa31.89■■■□□ 2.7
EEF1D-244ENST00000532543 BAZ1BQ9UIG0 1483 aaKnown RBP31.77■■■□□ 2.68
EEF1D-244ENST00000532543 BAZ1AQ9NRL2 1556 aaPredicted RBP31.77■■■□□ 2.68
EEF1D-244ENST00000532543 NESP48681 1621 aa31.67■■■□□ 2.66
EEF1D-244ENST00000532543 PEG3Q9GZU2 1588 aa31.6■■■□□ 2.65
EEF1D-244ENST00000532543 LAMC3Q9Y6N6 1575 aa31.56■■■□□ 2.64
EEF1D-244ENST00000532543 THOC2Q8NI27 1593 aaKnown RBP31.49■■■□□ 2.63
EEF1D-244ENST00000532543 PDS5BQ9NTI5 1447 aa31.44■■■□□ 2.62
EEF1D-244ENST00000532543 MROH2BQ7Z745 1585 aa31.35■■■□□ 2.61
EEF1D-244ENST00000532543 KIF21AQ7Z4S6 1674 aa31.29■■■□□ 2.6
EEF1D-244ENST00000532543 CADPSQ9ULU8 1353 aa31.2■■■□□ 2.59
EEF1D-244ENST00000532543 MRC2Q9UBG0 1479 aa31.14■■■□□ 2.58
EEF1D-244ENST00000532543 WDR62O43379 1518 aa31.05■■■□□ 2.56
EEF1D-244ENST00000532543 CEP164Q9UPV0 1460 aa30.97■■■□□ 2.55
EEF1D-244ENST00000532543 WIZO95785 1651 aa30.95■■■□□ 2.55
EEF1D-244ENST00000532543 TRIM41Q8WV44 630 aa30.95■■■□□ 2.55
EEF1D-244ENST00000532543 FANCD2Q9BXW9 1451 aa30.86■■■□□ 2.53
EEF1D-244ENST00000532543 CFTRP13569 1480 aa30.76■■■□□ 2.51
EEF1D-244ENST00000532543 TOP2AP11388 1531 aaKnown RBP30.66■■■□□ 2.5
EEF1D-244ENST00000532543 OSCARQ8IYS5 282 aa30.65■■■□□ 2.5
EEF1D-244ENST00000532543 RSF1Q96T23 1441 aaPredicted RBP30.61■■■□□ 2.49
EEF1D-244ENST00000532543 URB2Q14146 1524 aaKnown RBP30.54■■■□□ 2.48
EEF1D-244ENST00000532543 PRDM2Q13029 1718 aa30.42■■■□□ 2.46
EEF1D-244ENST00000532543 IFT140Q96RY7 1462 aa30.37■■■□□ 2.45
EEF1D-244ENST00000532543 ABCC8Q09428 1581 aa30.24■■■□□ 2.43
EEF1D-244ENST00000532543 CCDC88BA6NC98 1476 aa30.23■■■□□ 2.43
EEF1D-244ENST00000532543 RIMBP3CA6NJZ7 1639 aa30.21■■■□□ 2.43
EEF1D-244ENST00000532543 RIMBP3BA6NNM3 1639 aa30.21■■■□□ 2.43
EEF1D-244ENST00000532543 RIMBP3Q9UFD9 1639 aa30.21■■■□□ 2.43
EEF1D-244ENST00000532543 ZNF608Q9ULD9 1512 aaPredicted RBP30.21■■■□□ 2.43
EEF1D-244ENST00000532543 TOPBP1Q92547 1522 aa30.2■■■□□ 2.42
EEF1D-244ENST00000532543 ARHGEF11O15085 1522 aa30.12■■■□□ 2.41
EEF1D-244ENST00000532543 EIF4G3O43432 1585 aaKnown RBP30.11■■■□□ 2.41
EEF1D-244ENST00000532543 DNMBPQ6XZF7 1577 aa30.11■■■□□ 2.41
EEF1D-244ENST00000532543 CYB5RLQ6IPT4 315 aa29.91■■■□□ 2.38
EEF1D-244ENST00000532543 AQRO60306 1485 aaKnown RBP eCLIP29.91■■■□□ 2.388e-7■□□□□ 11.3
EEF1D-244ENST00000532543 TARBP1Q13395 1621 aaKnown RBP29.9■■■□□ 2.38
EEF1D-244ENST00000532543 FBLN2P98095 1184 aa29.89■■■□□ 2.38
EEF1D-244ENST00000532543 CHD1O14646 1710 aa29.88■■■□□ 2.37
EEF1D-244ENST00000532543 POLA1P09884 1462 aaPredicted RBP29.87■■■□□ 2.37
EEF1D-244ENST00000532543 TRHP20396 242 aaPredicted RBP29.78■■■□□ 2.36
EEF1D-244ENST00000532543 ARAP1Q96P48 1450 aa29.76■■■□□ 2.35
EEF1D-244ENST00000532543 WDR97A6NE52 1622 aa29.76■■■□□ 2.35
EEF1D-244ENST00000532543 SOGA1O94964 1423 aa29.75■■■□□ 2.35
EEF1D-244ENST00000532543 RAD54L2Q9Y4B4 1467 aa29.71■■■□□ 2.35
EEF1D-244ENST00000532543 TDRD9Q8NDG6 1382 aaKnown RBP29.69■■■□□ 2.34
EEF1D-244ENST00000532543 SNAPC4Q5SXM2 1469 aa29.67■■■□□ 2.34
EEF1D-244ENST00000532543 FGD5Q6ZNL6 1462 aa29.64■■■□□ 2.34
EEF1D-244ENST00000532543 MAGI1Q96QZ7 1491 aaPredicted RBP29.64■■■□□ 2.34
EEF1D-244ENST00000532543 CHMP7Q8WUX9 453 aaPredicted RBP29.64■■■□□ 2.34
EEF1D-244ENST00000532543 SYNJ1O43426 1573 aa29.64■■■□□ 2.33
EEF1D-244ENST00000532543 GRIN2BQ13224 1484 aa29.58■■■□□ 2.33
EEF1D-244ENST00000532543 CLASP1Q7Z460 1538 aa29.56■■■□□ 2.32
EEF1D-244ENST00000532543 SYNJ2O15056 1496 aa29.52■■■□□ 2.32
EEF1D-244ENST00000532543 CUX1P39880 1505 aa29.5■■■□□ 2.31
EEF1D-244ENST00000532543 GAPVD1Q14C86 1478 aa29.41■■■□□ 2.3
EEF1D-244ENST00000532543 PBRM1Q86U86 1689 aa29.37■■■□□ 2.29
EEF1D-244ENST00000532543 ABCA10Q8WWZ4 1543 aa29.31■■■□□ 2.28
EEF1D-244ENST00000532543 ABCA5Q8WWZ7 1642 aa29.26■■■□□ 2.27
EEF1D-244ENST00000532543 AEBP2Q6ZN18 517 aaPredicted RBP29.25■■■□□ 2.27
EEF1D-244ENST00000532543 WRNQ14191 1432 aaPredicted RBP eCLIP29.19■■■□□ 2.262e-6■■■□□ 16.6
EEF1D-244ENST00000532543 GRIN2AQ12879 1464 aa29.17■■■□□ 2.26
EEF1D-244ENST00000532543 ADAMTS12P58397 1594 aa29.1■■■□□ 2.25
EEF1D-244ENST00000532543 NUP160Q12769 1436 aa29.06■■■□□ 2.24
EEF1D-244ENST00000532543 FHAD1B1AJZ9 1412 aa29.04■■■□□ 2.24
EEF1D-244ENST00000532543 SUPT5HO00267 1087 aaKnown RBP29.03■■■□□ 2.24
EEF1D-244ENST00000532543 CEP170Q5SW79 1584 aa29.03■■■□□ 2.24
EEF1D-244ENST00000532543 TOP2BQ02880 1626 aa29■■■□□ 2.23
EEF1D-244ENST00000532543 BIVM-ERCC5R4GMW8 1640 aa28.98■■■□□ 2.23
EEF1D-244ENST00000532543 ERCC6L2Q5T890 1561 aa28.97■■■□□ 2.23
EEF1D-244ENST00000532543 ERICH3Q5RHP9 1530 aa28.97■■■□□ 2.23
EEF1D-244ENST00000532543 SHROOM2Q13796 1616 aa28.94■■■□□ 2.22
EEF1D-244ENST00000532543 PRG4Q92954 1404 aaPredicted RBP28.83■■■□□ 2.21
EEF1D-244ENST00000532543 NPM1P06748 294 aaKnown RBP eCLIP28.75■■■□□ 2.19
EEF1D-244ENST00000532543 JPH4Q96JJ6 628 aa28.75■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms