RNA–Protein interactions for RNA: ENST00000532456.5

APLP2-216, Transcript of amyloid beta precursor like protein 2, humanhuman

TSL 4

Gene APLP2, Length 664 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLP2-216ENST00000532456 NISCHQ9Y2I1 1504 aa48.31■■■■■ 5.32
APLP2-216ENST00000532456 CCDC180Q9P1Z9 1646 aa43.21■■■■■ 4.51
APLP2-216ENST00000532456 ABCC9O60706 1549 aa43.18■■■■■ 4.5
APLP2-216ENST00000532456 RB1CC1Q8TDY2 1594 aa41.14■■■■■ 4.18
APLP2-216ENST00000532456 NACADO15069 1562 aa40.91■■■■■ 4.14
APLP2-216ENST00000532456 DCAF8L2P0C7V8 631 aa40.88■■■■■ 4.13
APLP2-216ENST00000532456 DNAJC5BQ9UF47 199 aa40.41■■■■■ 4.06
APLP2-216ENST00000532456 MYO15BQ96JP2 1530 aa40.39■■■■■ 4.06
APLP2-216ENST00000532456 PABPN1Q86U42 306 aaKnown RBP eCLIP40.29■■■■■ 4.04
APLP2-216ENST00000532456 UNC13AQ9UPW8 1703 aa40.05■■■■■ 4
APLP2-216ENST00000532456 ZCCHC6Q5VYS8 1495 aaKnown RBP40.04■■■■■ 4
APLP2-216ENST00000532456 DCAF1Q9Y4B6 1507 aa39.91■■■■□ 3.98
APLP2-216ENST00000532456 BICRAQ9NZM4 1560 aa39.87■■■■□ 3.97
APLP2-216ENST00000532456 SHROOM4Q9ULL8 1493 aa39.43■■■■□ 3.9
APLP2-216ENST00000532456 SCRIBQ14160 1630 aa39.41■■■■□ 3.9
APLP2-216ENST00000532456 CC2D2AQ9P2K1 1620 aa38.96■■■■□ 3.83
APLP2-216ENST00000532456 EIF4G1Q04637 1599 aaKnown RBP38.92■■■■□ 3.82
APLP2-216ENST00000532456 CECR2Q9BXF3 1484 aa38.9■■■■□ 3.82
APLP2-216ENST00000532456 NCAPD3P42695 1498 aa37.79■■■■□ 3.64
APLP2-216ENST00000532456 ATAD2BQ9ULI0 1458 aa37.68■■■■□ 3.62
APLP2-216ENST00000532456 SMARCA4P51532 1647 aa37.61■■■■□ 3.61
APLP2-216ENST00000532456 SMARCA2P51531 1590 aa37.57■■■■□ 3.6
APLP2-216ENST00000532456 BAZ1AQ9NRL2 1556 aaPredicted RBP37.49■■■■□ 3.59
APLP2-216ENST00000532456 HMGXB3Q12766 1538 aa37.46■■■■□ 3.59
APLP2-216ENST00000532456 BAZ1BQ9UIG0 1483 aaKnown RBP37.33■■■■□ 3.57
APLP2-216ENST00000532456 ERCC6Q03468 1493 aa37.32■■■■□ 3.56
APLP2-216ENST00000532456 PEG3Q9GZU2 1588 aa37.25■■■■□ 3.55
APLP2-216ENST00000532456 MROH2BQ7Z745 1585 aa37.2■■■■□ 3.55
APLP2-216ENST00000532456 CUX2O14529 1486 aa37.17■■■■□ 3.54
APLP2-216ENST00000532456 NESP48681 1621 aa37.1■■■■□ 3.53
APLP2-216ENST00000532456 DNAJC5Q9H3Z4 198 aa37.08■■■■□ 3.53
APLP2-216ENST00000532456 LAMC3Q9Y6N6 1575 aa36.87■■■■□ 3.49
APLP2-216ENST00000532456 PDS5BQ9NTI5 1447 aa36.75■■■■□ 3.47
APLP2-216ENST00000532456 WIZO95785 1651 aa36.72■■■■□ 3.47
APLP2-216ENST00000532456 CADPSQ9ULU8 1353 aa36.68■■■■□ 3.46
APLP2-216ENST00000532456 THOC2Q8NI27 1593 aaKnown RBP36.63■■■■□ 3.45
APLP2-216ENST00000532456 KIF21AQ7Z4S6 1674 aa36.54■■■■□ 3.44
APLP2-216ENST00000532456 RSF1Q96T23 1441 aaPredicted RBP36.53■■■■□ 3.44
APLP2-216ENST00000532456 MRC2Q9UBG0 1479 aa36.36■■■■□ 3.41
APLP2-216ENST00000532456 TOP2AP11388 1531 aaKnown RBP36.3■■■■□ 3.4
APLP2-216ENST00000532456 CFTRP13569 1480 aa36.25■■■■□ 3.39
APLP2-216ENST00000532456 CEP164Q9UPV0 1460 aa36.24■■■■□ 3.39
APLP2-216ENST00000532456 FANCD2Q9BXW9 1451 aa36.22■■■■□ 3.39
APLP2-216ENST00000532456 WDR62O43379 1518 aa36.22■■■■□ 3.39
APLP2-216ENST00000532456 CCDC88BA6NC98 1476 aa35.94■■■■□ 3.34
APLP2-216ENST00000532456 URB2Q14146 1524 aaKnown RBP35.88■■■■□ 3.33
APLP2-216ENST00000532456 PRDM2Q13029 1718 aa35.74■■■■□ 3.31
APLP2-216ENST00000532456 OSCARQ8IYS5 282 aa35.61■■■■□ 3.29
APLP2-216ENST00000532456 IFT140Q96RY7 1462 aa35.54■■■■□ 3.28
APLP2-216ENST00000532456 TOPBP1Q92547 1522 aa35.53■■■■□ 3.28
APLP2-216ENST00000532456 ABCC8Q09428 1581 aa35.52■■■■□ 3.28
APLP2-216ENST00000532456 TRIM41Q8WV44 630 aa35.51■■■■□ 3.28
APLP2-216ENST00000532456 ZNF608Q9ULD9 1512 aaPredicted RBP35.42■■■■□ 3.26
APLP2-216ENST00000532456 DNMBPQ6XZF7 1577 aa35.39■■■■□ 3.26
APLP2-216ENST00000532456 EIF4G3O43432 1585 aaKnown RBP35.17■■■■□ 3.22
APLP2-216ENST00000532456 POLA1P09884 1462 aaPredicted RBP35.17■■■■□ 3.22
APLP2-216ENST00000532456 AQRO60306 1485 aaKnown RBP eCLIP35.16■■■■□ 3.221e-7■■■■■ 32.3
APLP2-216ENST00000532456 TARBP1Q13395 1621 aaKnown RBP35.15■■■■□ 3.22
APLP2-216ENST00000532456 SUPT5HO00267 1087 aaKnown RBP35.11■■■■□ 3.21
APLP2-216ENST00000532456 SOGA1O94964 1423 aa35.08■■■■□ 3.21
APLP2-216ENST00000532456 RAD54L2Q9Y4B4 1467 aa35.06■■■■□ 3.2
APLP2-216ENST00000532456 TDRD9Q8NDG6 1382 aaKnown RBP35■■■■□ 3.19
APLP2-216ENST00000532456 FBLN2P98095 1184 aa34.99■■■■□ 3.19
APLP2-216ENST00000532456 FGD5Q6ZNL6 1462 aa34.97■■■■□ 3.19
APLP2-216ENST00000532456 RIMBP3CA6NJZ7 1639 aa34.95■■■■□ 3.18
APLP2-216ENST00000532456 RIMBP3BA6NNM3 1639 aa34.95■■■■□ 3.18
APLP2-216ENST00000532456 RIMBP3Q9UFD9 1639 aa34.95■■■■□ 3.18
APLP2-216ENST00000532456 CUX1P39880 1505 aa34.94■■■■□ 3.18
APLP2-216ENST00000532456 ARHGEF11O15085 1522 aa34.9■■■■□ 3.18
APLP2-216ENST00000532456 CHD1O14646 1710 aa34.86■■■■□ 3.17
APLP2-216ENST00000532456 WDR97A6NE52 1622 aa34.83■■■■□ 3.17
APLP2-216ENST00000532456 SNAPC4Q5SXM2 1469 aa34.78■■■■□ 3.16
APLP2-216ENST00000532456 CHMP7Q8WUX9 453 aaPredicted RBP34.76■■■■□ 3.16
APLP2-216ENST00000532456 CYB5RLQ6IPT4 315 aa34.75■■■■□ 3.15
APLP2-216ENST00000532456 GRIN2BQ13224 1484 aa34.74■■■■□ 3.15
APLP2-216ENST00000532456 MAGI1Q96QZ7 1491 aaPredicted RBP34.71■■■■□ 3.15
APLP2-216ENST00000532456 GAPVD1Q14C86 1478 aa34.64■■■■□ 3.14
APLP2-216ENST00000532456 ABCA10Q8WWZ4 1543 aa34.6■■■■□ 3.13
APLP2-216ENST00000532456 SYNJ2O15056 1496 aa34.6■■■■□ 3.13
APLP2-216ENST00000532456 ARAP1Q96P48 1450 aa34.56■■■■□ 3.12
APLP2-216ENST00000532456 SYNJ1O43426 1573 aa34.55■■■■□ 3.12
APLP2-216ENST00000532456 WRNQ14191 1432 aaPredicted RBP eCLIP34.55■■■■□ 3.121e-6■■■■■ 58.5
APLP2-216ENST00000532456 CLASP1Q7Z460 1538 aa34.51■■■■□ 3.12
APLP2-216ENST00000532456 PBRM1Q86U86 1689 aa34.47■■■■□ 3.11
APLP2-216ENST00000532456 ABCA5Q8WWZ7 1642 aa34.46■■■■□ 3.11
APLP2-216ENST00000532456 TOP2BQ02880 1626 aa34.41■■■■□ 3.1
APLP2-216ENST00000532456 BIVM-ERCC5R4GMW8 1640 aa34.37■■■■□ 3.09
APLP2-216ENST00000532456 TRHP20396 242 aaPredicted RBP34.34■■■■□ 3.09
APLP2-216ENST00000532456 GRIN2AQ12879 1464 aa34.26■■■■□ 3.07
APLP2-216ENST00000532456 FHAD1B1AJZ9 1412 aa34.21■■■■□ 3.07
APLP2-216ENST00000532456 ADAMTS12P58397 1594 aa34.2■■■■□ 3.07
APLP2-216ENST00000532456 ERICH3Q5RHP9 1530 aa34.16■■■■□ 3.06
APLP2-216ENST00000532456 NUP160Q12769 1436 aa34.15■■■■□ 3.06
APLP2-216ENST00000532456 CEP170Q5SW79 1584 aa34.07■■■■□ 3.05
APLP2-216ENST00000532456 ERCC6L2Q5T890 1561 aa33.98■■■■□ 3.03
APLP2-216ENST00000532456 SHROOM2Q13796 1616 aa33.9■■■■□ 3.02
APLP2-216ENST00000532456 JPH4Q96JJ6 628 aa33.9■■■■□ 3.02
APLP2-216ENST00000532456 KIF27Q86VH2 1401 aa33.85■■■■□ 3.01
APLP2-216ENST00000532456 PRG4Q92954 1404 aaPredicted RBP33.85■■■■□ 3.01
APLP2-216ENST00000532456 IGF1RP08069 1367 aa33.83■■■■□ 3.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms