RNA–Protein interactions for RNA: ENST00000532444.5

EIF3M-212, Transcript of eukaryotic translation initiation factor 3 subunit M, humanhuman

TSL 5

Gene EIF3M, Length 633 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3M-212ENST00000532444 NISCHQ9Y2I1 1504 aa42■■■■■ 4.31
EIF3M-212ENST00000532444 ABCC9O60706 1549 aa38.14■■■■□ 3.7
EIF3M-212ENST00000532444 CCDC180Q9P1Z9 1646 aa37.79■■■■□ 3.64
EIF3M-212ENST00000532444 RB1CC1Q8TDY2 1594 aa36.15■■■■□ 3.38
EIF3M-212ENST00000532444 DNAJC5BQ9UF47 199 aa36.01■■■■□ 3.36
EIF3M-212ENST00000532444 NACADO15069 1562 aa35.81■■■■□ 3.32
EIF3M-212ENST00000532444 DCAF8L2P0C7V8 631 aa35.73■■■■□ 3.31
EIF3M-212ENST00000532444 PABPN1Q86U42 306 aaKnown RBP eCLIP35.5■■■■□ 3.27
EIF3M-212ENST00000532444 UNC13AQ9UPW8 1703 aa35.3■■■■□ 3.24
EIF3M-212ENST00000532444 MYO15BQ96JP2 1530 aa35.18■■■■□ 3.22
EIF3M-212ENST00000532444 BICRAQ9NZM4 1560 aa35.06■■■■□ 3.2
EIF3M-212ENST00000532444 ZCCHC6Q5VYS8 1495 aaKnown RBP34.72■■■■□ 3.15
EIF3M-212ENST00000532444 DCAF1Q9Y4B6 1507 aa34.63■■■■□ 3.13
EIF3M-212ENST00000532444 SHROOM4Q9ULL8 1493 aa34.55■■■■□ 3.12
EIF3M-212ENST00000532444 SCRIBQ14160 1630 aa34.47■■■■□ 3.11
EIF3M-212ENST00000532444 CC2D2AQ9P2K1 1620 aa34.41■■■■□ 3.1
EIF3M-212ENST00000532444 CECR2Q9BXF3 1484 aa34.38■■■■□ 3.09
EIF3M-212ENST00000532444 EIF4G1Q04637 1599 aaKnown RBP34.25■■■■□ 3.07
EIF3M-212ENST00000532444 DNAJC5Q9H3Z4 198 aa33.3■■■□□ 2.92
EIF3M-212ENST00000532444 NCAPD3P42695 1498 aa33.06■■■□□ 2.88
EIF3M-212ENST00000532444 ERCC6Q03468 1493 aa32.99■■■□□ 2.87
EIF3M-212ENST00000532444 CUX2O14529 1486 aa32.96■■■□□ 2.87
EIF3M-212ENST00000532444 ATAD2BQ9ULI0 1458 aa32.93■■■□□ 2.86
EIF3M-212ENST00000532444 SMARCA2P51531 1590 aa32.83■■■□□ 2.85
EIF3M-212ENST00000532444 SMARCA4P51532 1647 aa32.82■■■□□ 2.84
EIF3M-212ENST00000532444 HMGXB3Q12766 1538 aa32.77■■■□□ 2.84
EIF3M-212ENST00000532444 NESP48681 1621 aa32.66■■■□□ 2.82
EIF3M-212ENST00000532444 BAZ1AQ9NRL2 1556 aaPredicted RBP32.62■■■□□ 2.81
EIF3M-212ENST00000532444 BAZ1BQ9UIG0 1483 aaKnown RBP32.62■■■□□ 2.81
EIF3M-212ENST00000532444 PEG3Q9GZU2 1588 aa32.46■■■□□ 2.79
EIF3M-212ENST00000532444 LAMC3Q9Y6N6 1575 aa32.37■■■□□ 2.77
EIF3M-212ENST00000532444 MROH2BQ7Z745 1585 aa32.36■■■□□ 2.77
EIF3M-212ENST00000532444 THOC2Q8NI27 1593 aaKnown RBP32.35■■■□□ 2.77
EIF3M-212ENST00000532444 PDS5BQ9NTI5 1447 aa32.24■■■□□ 2.75
EIF3M-212ENST00000532444 KIF21AQ7Z4S6 1674 aa32.22■■■□□ 2.75
EIF3M-212ENST00000532444 CADPSQ9ULU8 1353 aa32.07■■■□□ 2.73
EIF3M-212ENST00000532444 WIZO95785 1651 aa31.98■■■□□ 2.71
EIF3M-212ENST00000532444 MRC2Q9UBG0 1479 aa31.95■■■□□ 2.7
EIF3M-212ENST00000532444 WDR62O43379 1518 aa31.85■■■□□ 2.69
EIF3M-212ENST00000532444 TRIM41Q8WV44 630 aa31.8■■■□□ 2.68
EIF3M-212ENST00000532444 CEP164Q9UPV0 1460 aa31.78■■■□□ 2.68
EIF3M-212ENST00000532444 FANCD2Q9BXW9 1451 aa31.72■■■□□ 2.67
EIF3M-212ENST00000532444 CFTRP13569 1480 aa31.62■■■□□ 2.65
EIF3M-212ENST00000532444 RSF1Q96T23 1441 aaPredicted RBP31.58■■■□□ 2.65
EIF3M-212ENST00000532444 TOP2AP11388 1531 aaKnown RBP31.53■■■□□ 2.64
EIF3M-212ENST00000532444 OSCARQ8IYS5 282 aa31.47■■■□□ 2.63
EIF3M-212ENST00000532444 URB2Q14146 1524 aaKnown RBP31.45■■■□□ 2.63
EIF3M-212ENST00000532444 PRDM2Q13029 1718 aa31.28■■■□□ 2.6
EIF3M-212ENST00000532444 CCDC88BA6NC98 1476 aa31.2■■■□□ 2.58
EIF3M-212ENST00000532444 IFT140Q96RY7 1462 aa31.14■■■□□ 2.58
EIF3M-212ENST00000532444 ZNF608Q9ULD9 1512 aaPredicted RBP31.12■■■□□ 2.57
EIF3M-212ENST00000532444 TOPBP1Q92547 1522 aa31.07■■■□□ 2.56
EIF3M-212ENST00000532444 RIMBP3CA6NJZ7 1639 aa31.04■■■□□ 2.56
EIF3M-212ENST00000532444 RIMBP3BA6NNM3 1639 aa31.04■■■□□ 2.56
EIF3M-212ENST00000532444 RIMBP3Q9UFD9 1639 aa31.04■■■□□ 2.56
EIF3M-212ENST00000532444 ABCC8Q09428 1581 aa31■■■□□ 2.55
EIF3M-212ENST00000532444 EIF4G3O43432 1585 aaKnown RBP30.92■■■□□ 2.54
EIF3M-212ENST00000532444 DNMBPQ6XZF7 1577 aa30.92■■■□□ 2.54
EIF3M-212ENST00000532444 ARHGEF11O15085 1522 aa30.91■■■□□ 2.54
EIF3M-212ENST00000532444 AQRO60306 1485 aaKnown RBP eCLIP30.82■■■□□ 2.534e-7■□□□□ 8.6
EIF3M-212ENST00000532444 TARBP1Q13395 1621 aaKnown RBP30.79■■■□□ 2.52
EIF3M-212ENST00000532444 CYB5RLQ6IPT4 315 aa30.78■■■□□ 2.52
EIF3M-212ENST00000532444 FBLN2P98095 1184 aa30.77■■■□□ 2.52
EIF3M-212ENST00000532444 CHD1O14646 1710 aa30.76■■■□□ 2.52
EIF3M-212ENST00000532444 POLA1P09884 1462 aaPredicted RBP30.73■■■□□ 2.51
EIF3M-212ENST00000532444 RAD54L2Q9Y4B4 1467 aa30.64■■■□□ 2.5
EIF3M-212ENST00000532444 SOGA1O94964 1423 aa30.63■■■□□ 2.49
EIF3M-212ENST00000532444 TDRD9Q8NDG6 1382 aaKnown RBP30.61■■■□□ 2.49
EIF3M-212ENST00000532444 ARAP1Q96P48 1450 aa30.58■■■□□ 2.49
EIF3M-212ENST00000532444 TRHP20396 242 aaPredicted RBP30.57■■■□□ 2.48
EIF3M-212ENST00000532444 FGD5Q6ZNL6 1462 aa30.5■■■□□ 2.47
EIF3M-212ENST00000532444 SNAPC4Q5SXM2 1469 aa30.5■■■□□ 2.47
EIF3M-212ENST00000532444 CHMP7Q8WUX9 453 aaPredicted RBP30.47■■■□□ 2.47
EIF3M-212ENST00000532444 WDR97A6NE52 1622 aa30.45■■■□□ 2.47
EIF3M-212ENST00000532444 CUX1P39880 1505 aa30.42■■■□□ 2.46
EIF3M-212ENST00000532444 MAGI1Q96QZ7 1491 aaPredicted RBP30.39■■■□□ 2.46
EIF3M-212ENST00000532444 GRIN2BQ13224 1484 aa30.38■■■□□ 2.45
EIF3M-212ENST00000532444 SYNJ1O43426 1573 aa30.37■■■□□ 2.45
EIF3M-212ENST00000532444 CLASP1Q7Z460 1538 aa30.37■■■□□ 2.45
EIF3M-212ENST00000532444 SYNJ2O15056 1496 aa30.3■■■□□ 2.44
EIF3M-212ENST00000532444 GAPVD1Q14C86 1478 aa30.24■■■□□ 2.43
EIF3M-212ENST00000532444 PBRM1Q86U86 1689 aa30.22■■■□□ 2.43
EIF3M-212ENST00000532444 ABCA10Q8WWZ4 1543 aa30.12■■■□□ 2.41
EIF3M-212ENST00000532444 ABCA5Q8WWZ7 1642 aa30.1■■■□□ 2.41
EIF3M-212ENST00000532444 SUPT5HO00267 1087 aaKnown RBP30.09■■■□□ 2.41
EIF3M-212ENST00000532444 WRNQ14191 1432 aaPredicted RBP eCLIP29.99■■■□□ 2.39
EIF3M-212ENST00000532444 GRIN2AQ12879 1464 aa29.97■■■□□ 2.39
EIF3M-212ENST00000532444 AEBP2Q6ZN18 517 aaPredicted RBP29.91■■■□□ 2.38
EIF3M-212ENST00000532444 ADAMTS12P58397 1594 aa29.9■■■□□ 2.38
EIF3M-212ENST00000532444 ERCC6L2Q5T890 1561 aa29.9■■■□□ 2.38
EIF3M-212ENST00000532444 CEP170Q5SW79 1584 aa29.87■■■□□ 2.37
EIF3M-212ENST00000532444 NUP160Q12769 1436 aa29.86■■■□□ 2.37
EIF3M-212ENST00000532444 TOP2BQ02880 1626 aa29.85■■■□□ 2.37
EIF3M-212ENST00000532444 BIVM-ERCC5R4GMW8 1640 aa29.85■■■□□ 2.37
EIF3M-212ENST00000532444 FHAD1B1AJZ9 1412 aa29.83■■■□□ 2.37
EIF3M-212ENST00000532444 ERICH3Q5RHP9 1530 aa29.75■■■□□ 2.35
EIF3M-212ENST00000532444 SHROOM2Q13796 1616 aa29.74■■■□□ 2.35
EIF3M-212ENST00000532444 PRG4Q92954 1404 aaPredicted RBP29.64■■■□□ 2.34
EIF3M-212ENST00000532444 JPH4Q96JJ6 628 aa29.63■■■□□ 2.33
EIF3M-212ENST00000532444 KIF13AQ9H1H9 1805 aa29.52■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms