RNA–Protein interactions for RNA: ENST00000532442.5

MS4A4E-207, Transcript of membrane spanning 4-domains A4E, humanhuman

TSL 2

Gene MS4A4E, Length 1,125 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4E-207ENST00000532442 NISCHQ9Y2I1 1504 aa36.92■■■■□ 3.5
MS4A4E-207ENST00000532442 CCDC180Q9P1Z9 1646 aa32.69■■■□□ 2.82
MS4A4E-207ENST00000532442 ABCC9O60706 1549 aa31.46■■■□□ 2.63
MS4A4E-207ENST00000532442 ZCCHC6Q5VYS8 1495 aaKnown RBP30.84■■■□□ 2.53
MS4A4E-207ENST00000532442 MYO15BQ96JP2 1530 aa30.68■■■□□ 2.5
MS4A4E-207ENST00000532442 DCAF1Q9Y4B6 1507 aa30.67■■■□□ 2.5
MS4A4E-207ENST00000532442 NACADO15069 1562 aa30.65■■■□□ 2.5
MS4A4E-207ENST00000532442 RB1CC1Q8TDY2 1594 aa30.55■■■□□ 2.48
MS4A4E-207ENST00000532442 DCAF8L2P0C7V8 631 aa30.5■■■□□ 2.47
MS4A4E-207ENST00000532442 UNC13AQ9UPW8 1703 aa29.78■■■□□ 2.36
MS4A4E-207ENST00000532442 SCRIBQ14160 1630 aa29.72■■■□□ 2.35
MS4A4E-207ENST00000532442 BICRAQ9NZM4 1560 aa29.57■■■□□ 2.32
MS4A4E-207ENST00000532442 SHROOM4Q9ULL8 1493 aa29.47■■■□□ 2.31
MS4A4E-207ENST00000532442 PABPN1Q86U42 306 aaKnown RBP eCLIP29.43■■■□□ 2.3
MS4A4E-207ENST00000532442 DNAJC5BQ9UF47 199 aa28.8■■■□□ 2.2
MS4A4E-207ENST00000532442 EIF4G1Q04637 1599 aaKnown RBP28.76■■■□□ 2.19
MS4A4E-207ENST00000532442 CECR2Q9BXF3 1484 aa28.64■■■□□ 2.17
MS4A4E-207ENST00000532442 BAZ1AQ9NRL2 1556 aaPredicted RBP28.61■■■□□ 2.17
MS4A4E-207ENST00000532442 SMARCA4P51532 1647 aa28.54■■■□□ 2.16
MS4A4E-207ENST00000532442 CC2D2AQ9P2K1 1620 aa28.52■■■□□ 2.16
MS4A4E-207ENST00000532442 MROH2BQ7Z745 1585 aa28.41■■■□□ 2.14
MS4A4E-207ENST00000532442 PEG3Q9GZU2 1588 aa28.33■■■□□ 2.13
MS4A4E-207ENST00000532442 SMARCA2P51531 1590 aa28.32■■■□□ 2.12
MS4A4E-207ENST00000532442 ATAD2BQ9ULI0 1458 aa28.3■■■□□ 2.12
MS4A4E-207ENST00000532442 NCAPD3P42695 1498 aa28.27■■■□□ 2.12
MS4A4E-207ENST00000532442 RSF1Q96T23 1441 aaPredicted RBP28.26■■■□□ 2.11
MS4A4E-207ENST00000532442 HMGXB3Q12766 1538 aa28.17■■■□□ 2.1
MS4A4E-207ENST00000532442 WIZO95785 1651 aa28.09■■■□□ 2.09
MS4A4E-207ENST00000532442 BAZ1BQ9UIG0 1483 aaKnown RBP28.08■■■□□ 2.09
MS4A4E-207ENST00000532442 TOP2AP11388 1531 aaKnown RBP27.89■■■□□ 2.06
MS4A4E-207ENST00000532442 SUPT5HO00267 1087 aaKnown RBP27.71■■■□□ 2.03
MS4A4E-207ENST00000532442 CCDC88BA6NC98 1476 aa27.53■■■□□ 2
MS4A4E-207ENST00000532442 LAMC3Q9Y6N6 1575 aa27.44■■□□□ 1.98
MS4A4E-207ENST00000532442 CADPSQ9ULU8 1353 aa27.44■■□□□ 1.98
MS4A4E-207ENST00000532442 CFTRP13569 1480 aa27.38■■□□□ 1.97
MS4A4E-207ENST00000532442 NESP48681 1621 aa27.34■■□□□ 1.97
MS4A4E-207ENST00000532442 PDS5BQ9NTI5 1447 aa27.24■■□□□ 1.95
MS4A4E-207ENST00000532442 PRDM2Q13029 1718 aa27.17■■□□□ 1.94
MS4A4E-207ENST00000532442 ERCC6Q03468 1493 aa27.12■■□□□ 1.93
MS4A4E-207ENST00000532442 FANCD2Q9BXW9 1451 aa27.09■■□□□ 1.93
MS4A4E-207ENST00000532442 KIF21AQ7Z4S6 1674 aa27.04■■□□□ 1.92
MS4A4E-207ENST00000532442 CEP164Q9UPV0 1460 aa27.03■■□□□ 1.92
MS4A4E-207ENST00000532442 MRC2Q9UBG0 1479 aa26.92■■□□□ 1.9
MS4A4E-207ENST00000532442 THOC2Q8NI27 1593 aaKnown RBP26.9■■□□□ 1.9
MS4A4E-207ENST00000532442 WDR62O43379 1518 aa26.83■■□□□ 1.89
MS4A4E-207ENST00000532442 ABCC8Q09428 1581 aa26.82■■□□□ 1.88
MS4A4E-207ENST00000532442 CUX2O14529 1486 aa26.78■■□□□ 1.88
MS4A4E-207ENST00000532442 URB2Q14146 1524 aaKnown RBP26.78■■□□□ 1.88
MS4A4E-207ENST00000532442 DNMBPQ6XZF7 1577 aa26.73■■□□□ 1.87
MS4A4E-207ENST00000532442 TOPBP1Q92547 1522 aa26.7■■□□□ 1.87
MS4A4E-207ENST00000532442 WRNQ14191 1432 aaPredicted RBP eCLIP26.64■■□□□ 1.85
MS4A4E-207ENST00000532442 CUX1P39880 1505 aa26.63■■□□□ 1.85
MS4A4E-207ENST00000532442 TOP2BQ02880 1626 aa26.55■■□□□ 1.84
MS4A4E-207ENST00000532442 BIVM-ERCC5R4GMW8 1640 aa26.54■■□□□ 1.84
MS4A4E-207ENST00000532442 SYNJ1O43426 1573 aa26.5■■□□□ 1.83
MS4A4E-207ENST00000532442 POLA1P09884 1462 aaPredicted RBP26.5■■□□□ 1.83
MS4A4E-207ENST00000532442 FGD5Q6ZNL6 1462 aa26.48■■□□□ 1.83
MS4A4E-207ENST00000532442 IFT140Q96RY7 1462 aa26.48■■□□□ 1.83
MS4A4E-207ENST00000532442 SOGA1O94964 1423 aa26.39■■□□□ 1.82
MS4A4E-207ENST00000532442 TARBP1Q13395 1621 aaKnown RBP26.39■■□□□ 1.81
MS4A4E-207ENST00000532442 DNAJC5Q9H3Z4 198 aa26.35■■□□□ 1.81
MS4A4E-207ENST00000532442 RAD54L2Q9Y4B4 1467 aa26.32■■□□□ 1.8
MS4A4E-207ENST00000532442 WDR97A6NE52 1622 aa26.31■■□□□ 1.8
MS4A4E-207ENST00000532442 ABCA10Q8WWZ4 1543 aa26.3■■□□□ 1.8
MS4A4E-207ENST00000532442 ZNF608Q9ULD9 1512 aaPredicted RBP26.24■■□□□ 1.79
MS4A4E-207ENST00000532442 TRIM41Q8WV44 630 aa26.23■■□□□ 1.79
MS4A4E-207ENST00000532442 EIF4G3O43432 1585 aaKnown RBP26.18■■□□□ 1.78
MS4A4E-207ENST00000532442 CHIC1Q5VXU3 224 aa26.17■■□□□ 1.78
MS4A4E-207ENST00000532442 TDRD9Q8NDG6 1382 aaKnown RBP26.16■■□□□ 1.78
MS4A4E-207ENST00000532442 AQRO60306 1485 aaKnown RBP eCLIP26.14■■□□□ 1.78
MS4A4E-207ENST00000532442 ABCA5Q8WWZ7 1642 aa26.14■■□□□ 1.77
MS4A4E-207ENST00000532442 GAPVD1Q14C86 1478 aa26.11■■□□□ 1.77
MS4A4E-207ENST00000532442 GRIN2BQ13224 1484 aa26.08■■□□□ 1.77
MS4A4E-207ENST00000532442 KIF27Q86VH2 1401 aa26.06■■□□□ 1.76
MS4A4E-207ENST00000532442 ERICH3Q5RHP9 1530 aa26.01■■□□□ 1.75
MS4A4E-207ENST00000532442 PBRM1Q86U86 1689 aa25.99■■□□□ 1.75
MS4A4E-207ENST00000532442 MAGI1Q96QZ7 1491 aaPredicted RBP25.98■■□□□ 1.75
MS4A4E-207ENST00000532442 SNAPC4Q5SXM2 1469 aa25.92■■□□□ 1.74
MS4A4E-207ENST00000532442 IGF1RP08069 1367 aa25.91■■□□□ 1.74
MS4A4E-207ENST00000532442 EEA1Q15075 1411 aa25.89■■□□□ 1.74
MS4A4E-207ENST00000532442 SYNJ2O15056 1496 aa25.86■■□□□ 1.73
MS4A4E-207ENST00000532442 FHAD1B1AJZ9 1412 aa25.86■■□□□ 1.73
MS4A4E-207ENST00000532442 ADAMTS12P58397 1594 aa25.85■■□□□ 1.73
MS4A4E-207ENST00000532442 RUSC2Q8N2Y8 1516 aa25.84■■□□□ 1.73
MS4A4E-207ENST00000532442 CUL7Q14999 1698 aa25.83■■□□□ 1.73
MS4A4E-207ENST00000532442 CHMP7Q8WUX9 453 aaPredicted RBP25.76■■□□□ 1.71
MS4A4E-207ENST00000532442 CHD1O14646 1710 aa25.74■■□□□ 1.71
MS4A4E-207ENST00000532442 CARMIL1Q5VZK9 1371 aa25.74■■□□□ 1.71
MS4A4E-207ENST00000532442 GRIN2AQ12879 1464 aa25.72■■□□□ 1.71
MS4A4E-207ENST00000532442 CSRNP3Q8WYN3 585 aa25.71■■□□□ 1.71
MS4A4E-207ENST00000532442 FBLN2P98095 1184 aa25.7■■□□□ 1.7
MS4A4E-207ENST00000532442 OSCARQ8IYS5 282 aa25.7■■□□□ 1.7
MS4A4E-207ENST00000532442 PRXQ9BXM0 1461 aa25.68■■□□□ 1.7
MS4A4E-207ENST00000532442 RAPGEF2Q9Y4G8 1499 aa25.65■■□□□ 1.7
MS4A4E-207ENST00000532442 NUP160Q12769 1436 aa25.63■■□□□ 1.69
MS4A4E-207ENST00000532442 FAM9AQ8IZU1 332 aaPredicted RBP25.56■■□□□ 1.68
MS4A4E-207ENST00000532442 CLASP1Q7Z460 1538 aa25.54■■□□□ 1.68
MS4A4E-207ENST00000532442 CEP170Q5SW79 1584 aa25.54■■□□□ 1.68
MS4A4E-207ENST00000532442 KIF21BO75037 1637 aa25.54■■□□□ 1.68
MS4A4E-207ENST00000532442 KIAA0586Q9BVV6 1533 aa25.47■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 125.8 ms