RNA–Protein interactions for RNA: ENST00000532175.5

PAX6-225, Transcript of paired box 6, humanhuman

TSL 3

Gene PAX6, Length 524 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-225ENST00000532175 NISCHQ9Y2I1 1504 aa36.36■■■■□ 3.41
PAX6-225ENST00000532175 ABCC9O60706 1549 aa32.8■■■□□ 2.84
PAX6-225ENST00000532175 CCDC180Q9P1Z9 1646 aa32.56■■■□□ 2.8
PAX6-225ENST00000532175 RB1CC1Q8TDY2 1594 aa31.09■■■□□ 2.57
PAX6-225ENST00000532175 DNAJC5BQ9UF47 199 aa30.93■■■□□ 2.54
PAX6-225ENST00000532175 NACADO15069 1562 aa30.86■■■□□ 2.53
PAX6-225ENST00000532175 DCAF8L2P0C7V8 631 aa30.82■■■□□ 2.52
PAX6-225ENST00000532175 PABPN1Q86U42 306 aaKnown RBP eCLIP30.58■■■□□ 2.49
PAX6-225ENST00000532175 MYO15BQ96JP2 1530 aa30.39■■■□□ 2.46
PAX6-225ENST00000532175 UNC13AQ9UPW8 1703 aa30.33■■■□□ 2.45
PAX6-225ENST00000532175 BICRAQ9NZM4 1560 aa30.24■■■□□ 2.43
PAX6-225ENST00000532175 ZCCHC6Q5VYS8 1495 aaKnown RBP30.12■■■□□ 2.41
PAX6-225ENST00000532175 DCAF1Q9Y4B6 1507 aa29.98■■■□□ 2.39
PAX6-225ENST00000532175 SCRIBQ14160 1630 aa29.76■■■□□ 2.35
PAX6-225ENST00000532175 SHROOM4Q9ULL8 1493 aa29.74■■■□□ 2.35
PAX6-225ENST00000532175 CC2D2AQ9P2K1 1620 aa29.57■■■□□ 2.32
PAX6-225ENST00000532175 CECR2Q9BXF3 1484 aa29.54■■■□□ 2.32
PAX6-225ENST00000532175 EIF4G1Q04637 1599 aaKnown RBP29.49■■■□□ 2.31
PAX6-225ENST00000532175 NCAPD3P42695 1498 aa28.54■■■□□ 2.16
PAX6-225ENST00000532175 ATAD2BQ9ULI0 1458 aa28.46■■■□□ 2.15
PAX6-225ENST00000532175 DNAJC5Q9H3Z4 198 aa28.39■■■□□ 2.14
PAX6-225ENST00000532175 SMARCA4P51532 1647 aa28.36■■■□□ 2.13
PAX6-225ENST00000532175 SMARCA2P51531 1590 aa28.31■■■□□ 2.12
PAX6-225ENST00000532175 ERCC6Q03468 1493 aa28.28■■■□□ 2.12
PAX6-225ENST00000532175 HMGXB3Q12766 1538 aa28.28■■■□□ 2.12
PAX6-225ENST00000532175 CUX2O14529 1486 aa28.24■■■□□ 2.11
PAX6-225ENST00000532175 BAZ1AQ9NRL2 1556 aaPredicted RBP28.2■■■□□ 2.1
PAX6-225ENST00000532175 NESP48681 1621 aa28.16■■■□□ 2.1
PAX6-225ENST00000532175 BAZ1BQ9UIG0 1483 aaKnown RBP28.15■■■□□ 2.1
PAX6-225ENST00000532175 PEG3Q9GZU2 1588 aa28.07■■■□□ 2.08
PAX6-225ENST00000532175 MROH2BQ7Z745 1585 aa28.05■■■□□ 2.08
PAX6-225ENST00000532175 LAMC3Q9Y6N6 1575 aa27.86■■■□□ 2.05
PAX6-225ENST00000532175 THOC2Q8NI27 1593 aaKnown RBP27.82■■■□□ 2.04
PAX6-225ENST00000532175 PDS5BQ9NTI5 1447 aa27.74■■■□□ 2.03
PAX6-225ENST00000532175 KIF21AQ7Z4S6 1674 aa27.69■■■□□ 2.02
PAX6-225ENST00000532175 CADPSQ9ULU8 1353 aa27.69■■■□□ 2.02
PAX6-225ENST00000532175 WIZO95785 1651 aa27.67■■■□□ 2.02
PAX6-225ENST00000532175 MRC2Q9UBG0 1479 aa27.51■■□□□ 1.99
PAX6-225ENST00000532175 RSF1Q96T23 1441 aaPredicted RBP27.45■■□□□ 1.98
PAX6-225ENST00000532175 WDR62O43379 1518 aa27.43■■□□□ 1.98
PAX6-225ENST00000532175 CEP164Q9UPV0 1460 aa27.38■■□□□ 1.97
PAX6-225ENST00000532175 FANCD2Q9BXW9 1451 aa27.36■■□□□ 1.97
PAX6-225ENST00000532175 CFTRP13569 1480 aa27.34■■□□□ 1.97
PAX6-225ENST00000532175 TOP2AP11388 1531 aaKnown RBP27.31■■□□□ 1.96
PAX6-225ENST00000532175 URB2Q14146 1524 aaKnown RBP27.16■■□□□ 1.94
PAX6-225ENST00000532175 TRIM41Q8WV44 630 aa27.15■■□□□ 1.94
PAX6-225ENST00000532175 CCDC88BA6NC98 1476 aa27.05■■□□□ 1.92
PAX6-225ENST00000532175 OSCARQ8IYS5 282 aa26.98■■□□□ 1.91
PAX6-225ENST00000532175 PRDM2Q13029 1718 aa26.9■■□□□ 1.9
PAX6-225ENST00000532175 ZNF608Q9ULD9 1512 aaPredicted RBP26.85■■□□□ 1.89
PAX6-225ENST00000532175 IFT140Q96RY7 1462 aa26.83■■□□□ 1.89
PAX6-225ENST00000532175 TOPBP1Q92547 1522 aa26.83■■□□□ 1.89
PAX6-225ENST00000532175 ABCC8Q09428 1581 aa26.71■■□□□ 1.87
PAX6-225ENST00000532175 DNMBPQ6XZF7 1577 aa26.69■■□□□ 1.86
PAX6-225ENST00000532175 EIF4G3O43432 1585 aaKnown RBP26.63■■□□□ 1.85
PAX6-225ENST00000532175 AQRO60306 1485 aaKnown RBP eCLIP26.61■■□□□ 1.85
PAX6-225ENST00000532175 RIMBP3CA6NJZ7 1639 aa26.6■■□□□ 1.85
PAX6-225ENST00000532175 RIMBP3BA6NNM3 1639 aa26.6■■□□□ 1.85
PAX6-225ENST00000532175 RIMBP3Q9UFD9 1639 aa26.6■■□□□ 1.85
PAX6-225ENST00000532175 TARBP1Q13395 1621 aaKnown RBP26.57■■□□□ 1.84
PAX6-225ENST00000532175 POLA1P09884 1462 aaPredicted RBP26.55■■□□□ 1.84
PAX6-225ENST00000532175 ARHGEF11O15085 1522 aa26.54■■□□□ 1.84
PAX6-225ENST00000532175 RAD54L2Q9Y4B4 1467 aa26.5■■□□□ 1.83
PAX6-225ENST00000532175 FBLN2P98095 1184 aa26.46■■□□□ 1.83
PAX6-225ENST00000532175 SOGA1O94964 1423 aa26.45■■□□□ 1.82
PAX6-225ENST00000532175 TDRD9Q8NDG6 1382 aaKnown RBP26.44■■□□□ 1.82
PAX6-225ENST00000532175 CHD1O14646 1710 aa26.41■■□□□ 1.82
PAX6-225ENST00000532175 CYB5RLQ6IPT4 315 aa26.4■■□□□ 1.82
PAX6-225ENST00000532175 FGD5Q6ZNL6 1462 aa26.38■■□□□ 1.81
PAX6-225ENST00000532175 CUX1P39880 1505 aa26.35■■□□□ 1.81
PAX6-225ENST00000532175 SNAPC4Q5SXM2 1469 aa26.3■■□□□ 1.8
PAX6-225ENST00000532175 ARAP1Q96P48 1450 aa26.29■■□□□ 1.8
PAX6-225ENST00000532175 WDR97A6NE52 1622 aa26.22■■□□□ 1.79
PAX6-225ENST00000532175 CHMP7Q8WUX9 453 aaPredicted RBP26.22■■□□□ 1.79
PAX6-225ENST00000532175 SUPT5HO00267 1087 aaKnown RBP26.21■■□□□ 1.79
PAX6-225ENST00000532175 GRIN2BQ13224 1484 aa26.2■■□□□ 1.78
PAX6-225ENST00000532175 MAGI1Q96QZ7 1491 aaPredicted RBP26.18■■□□□ 1.78
PAX6-225ENST00000532175 CLASP1Q7Z460 1538 aa26.16■■□□□ 1.78
PAX6-225ENST00000532175 SYNJ2O15056 1496 aa26.12■■□□□ 1.77
PAX6-225ENST00000532175 TRHP20396 242 aaPredicted RBP26.12■■□□□ 1.77
PAX6-225ENST00000532175 GAPVD1Q14C86 1478 aa26.11■■□□□ 1.77
PAX6-225ENST00000532175 SYNJ1O43426 1573 aa26.1■■□□□ 1.77
PAX6-225ENST00000532175 ABCA10Q8WWZ4 1543 aa26.06■■□□□ 1.76
PAX6-225ENST00000532175 PBRM1Q86U86 1689 aa26.02■■□□□ 1.76
PAX6-225ENST00000532175 ABCA5Q8WWZ7 1642 aa26■■□□□ 1.75
PAX6-225ENST00000532175 WRNQ14191 1432 aaPredicted RBP eCLIP25.94■■□□□ 1.74
PAX6-225ENST00000532175 GRIN2AQ12879 1464 aa25.87■■□□□ 1.73
PAX6-225ENST00000532175 TOP2BQ02880 1626 aa25.85■■□□□ 1.73
PAX6-225ENST00000532175 BIVM-ERCC5R4GMW8 1640 aa25.83■■□□□ 1.73
PAX6-225ENST00000532175 ADAMTS12P58397 1594 aa25.82■■□□□ 1.72
PAX6-225ENST00000532175 ERCC6L2Q5T890 1561 aa25.8■■□□□ 1.72
PAX6-225ENST00000532175 NUP160Q12769 1436 aa25.8■■□□□ 1.72
PAX6-225ENST00000532175 CEP170Q5SW79 1584 aa25.78■■□□□ 1.72
PAX6-225ENST00000532175 FHAD1B1AJZ9 1412 aa25.76■■□□□ 1.71
PAX6-225ENST00000532175 ERICH3Q5RHP9 1530 aa25.7■■□□□ 1.7
PAX6-225ENST00000532175 AEBP2Q6ZN18 517 aaPredicted RBP25.66■■□□□ 1.7
PAX6-225ENST00000532175 SHROOM2Q13796 1616 aa25.64■■□□□ 1.7
PAX6-225ENST00000532175 PRG4Q92954 1404 aaPredicted RBP25.57■■□□□ 1.68
PAX6-225ENST00000532175 JPH4Q96JJ6 628 aa25.56■■□□□ 1.68
PAX6-225ENST00000532175 RUSC2Q8N2Y8 1516 aa25.46■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms