RNA–Protein interactions for RNA: ENST00000532127.5

PUF60-219, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 2

Gene PUF60, Length 604 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-219ENST00000532127 NISCHQ9Y2I1 1504 aa46.23■■■■■ 4.99
PUF60-219ENST00000532127 CCDC180Q9P1Z9 1646 aa40.85■■■■■ 4.13
PUF60-219ENST00000532127 ABCC9O60706 1549 aa39.24■■■■□ 3.87
PUF60-219ENST00000532127 ZCCHC6Q5VYS8 1495 aaKnown RBP38.67■■■■□ 3.78
PUF60-219ENST00000532127 DCAF1Q9Y4B6 1507 aa38.32■■■■□ 3.72
PUF60-219ENST00000532127 DCAF8L2P0C7V8 631 aa38.25■■■■□ 3.71
PUF60-219ENST00000532127 MYO15BQ96JP2 1530 aa38.23■■■■□ 3.71
PUF60-219ENST00000532127 NACADO15069 1562 aa38.23■■■■□ 3.71
PUF60-219ENST00000532127 RB1CC1Q8TDY2 1594 aa38.1■■■■□ 3.69
PUF60-219ENST00000532127 SCRIBQ14160 1630 aa37.28■■■■□ 3.56
PUF60-219ENST00000532127 UNC13AQ9UPW8 1703 aa37.22■■■■□ 3.55
PUF60-219ENST00000532127 BICRAQ9NZM4 1560 aa36.89■■■■□ 3.5
PUF60-219ENST00000532127 SHROOM4Q9ULL8 1493 aa36.86■■■■□ 3.49
PUF60-219ENST00000532127 PABPN1Q86U42 306 aaKnown RBP eCLIP36.74■■■■□ 3.47
PUF60-219ENST00000532127 CECR2Q9BXF3 1484 aa35.89■■■■□ 3.34
PUF60-219ENST00000532127 EIF4G1Q04637 1599 aaKnown RBP35.88■■■■□ 3.33
PUF60-219ENST00000532127 BAZ1AQ9NRL2 1556 aaPredicted RBP35.81■■■■□ 3.32
PUF60-219ENST00000532127 SMARCA4P51532 1647 aa35.74■■■■□ 3.31
PUF60-219ENST00000532127 MROH2BQ7Z745 1585 aa35.61■■■■□ 3.29
PUF60-219ENST00000532127 CC2D2AQ9P2K1 1620 aa35.55■■■■□ 3.28
PUF60-219ENST00000532127 RSF1Q96T23 1441 aaPredicted RBP35.46■■■■□ 3.27
PUF60-219ENST00000532127 PEG3Q9GZU2 1588 aa35.4■■■■□ 3.26
PUF60-219ENST00000532127 SMARCA2P51531 1590 aa35.38■■■■□ 3.25
PUF60-219ENST00000532127 ATAD2BQ9ULI0 1458 aa35.35■■■■□ 3.25
PUF60-219ENST00000532127 DNAJC5BQ9UF47 199 aa35.33■■■■□ 3.25
PUF60-219ENST00000532127 WIZO95785 1651 aa35.27■■■■□ 3.24
PUF60-219ENST00000532127 NCAPD3P42695 1498 aa35.23■■■■□ 3.23
PUF60-219ENST00000532127 HMGXB3Q12766 1538 aa35.16■■■■□ 3.22
PUF60-219ENST00000532127 BAZ1BQ9UIG0 1483 aaKnown RBP35.12■■■■□ 3.21
PUF60-219ENST00000532127 SUPT5HO00267 1087 aaKnown RBP35.01■■■■□ 3.2
PUF60-219ENST00000532127 TOP2AP11388 1531 aaKnown RBP34.98■■■■□ 3.19
PUF60-219ENST00000532127 CCDC88BA6NC98 1476 aa34.52■■■■□ 3.12
PUF60-219ENST00000532127 CADPSQ9ULU8 1353 aa34.23■■■■□ 3.07
PUF60-219ENST00000532127 LAMC3Q9Y6N6 1575 aa34.22■■■■□ 3.07
PUF60-219ENST00000532127 CFTRP13569 1480 aa34.19■■■■□ 3.06
PUF60-219ENST00000532127 NESP48681 1621 aa34.15■■■■□ 3.06
PUF60-219ENST00000532127 PRDM2Q13029 1718 aa34.03■■■■□ 3.04
PUF60-219ENST00000532127 PDS5BQ9NTI5 1447 aa33.96■■■■□ 3.03
PUF60-219ENST00000532127 FANCD2Q9BXW9 1451 aa33.85■■■■□ 3.01
PUF60-219ENST00000532127 ERCC6Q03468 1493 aa33.81■■■■□ 3
PUF60-219ENST00000532127 KIF21AQ7Z4S6 1674 aa33.8■■■■□ 3
PUF60-219ENST00000532127 CEP164Q9UPV0 1460 aa33.76■■■■□ 3
PUF60-219ENST00000532127 MRC2Q9UBG0 1479 aa33.57■■■□□ 2.97
PUF60-219ENST00000532127 THOC2Q8NI27 1593 aaKnown RBP33.54■■■□□ 2.96
PUF60-219ENST00000532127 URB2Q14146 1524 aaKnown RBP33.47■■■□□ 2.95
PUF60-219ENST00000532127 ABCC8Q09428 1581 aa33.46■■■□□ 2.95
PUF60-219ENST00000532127 WDR62O43379 1518 aa33.45■■■□□ 2.95
PUF60-219ENST00000532127 DNMBPQ6XZF7 1577 aa33.43■■■□□ 2.94
PUF60-219ENST00000532127 WRNQ14191 1432 aaPredicted RBP eCLIP33.43■■■□□ 2.94
PUF60-219ENST00000532127 TOPBP1Q92547 1522 aa33.39■■■□□ 2.94
PUF60-219ENST00000532127 CUX1P39880 1505 aa33.38■■■□□ 2.93
PUF60-219ENST00000532127 SYNJ1O43426 1573 aa33.31■■■□□ 2.92
PUF60-219ENST00000532127 TOP2BQ02880 1626 aa33.3■■■□□ 2.92
PUF60-219ENST00000532127 BIVM-ERCC5R4GMW8 1640 aa33.3■■■□□ 2.92
PUF60-219ENST00000532127 CUX2O14529 1486 aa33.22■■■□□ 2.91
PUF60-219ENST00000532127 FGD5Q6ZNL6 1462 aa33.17■■■□□ 2.9
PUF60-219ENST00000532127 POLA1P09884 1462 aaPredicted RBP33.16■■■□□ 2.9
PUF60-219ENST00000532127 CHIC1Q5VXU3 224 aa33.08■■■□□ 2.89
PUF60-219ENST00000532127 TRIM41Q8WV44 630 aa33.07■■■□□ 2.88
PUF60-219ENST00000532127 IFT140Q96RY7 1462 aa33.03■■■□□ 2.88
PUF60-219ENST00000532127 SOGA1O94964 1423 aa33.01■■■□□ 2.87
PUF60-219ENST00000532127 TARBP1Q13395 1621 aaKnown RBP32.98■■■□□ 2.87
PUF60-219ENST00000532127 RAD54L2Q9Y4B4 1467 aa32.97■■■□□ 2.87
PUF60-219ENST00000532127 ABCA10Q8WWZ4 1543 aa32.9■■■□□ 2.86
PUF60-219ENST00000532127 WDR97A6NE52 1622 aa32.89■■■□□ 2.86
PUF60-219ENST00000532127 ZNF608Q9ULD9 1512 aaPredicted RBP32.78■■■□□ 2.84
PUF60-219ENST00000532127 EIF4G3O43432 1585 aaKnown RBP32.73■■■□□ 2.83
PUF60-219ENST00000532127 ABCA5Q8WWZ7 1642 aa32.72■■■□□ 2.83
PUF60-219ENST00000532127 TDRD9Q8NDG6 1382 aaKnown RBP32.71■■■□□ 2.83
PUF60-219ENST00000532127 KIF27Q86VH2 1401 aa32.69■■■□□ 2.82
PUF60-219ENST00000532127 AQRO60306 1485 aaKnown RBP eCLIP32.67■■■□□ 2.821e-12■■■■■ 58
PUF60-219ENST00000532127 GAPVD1Q14C86 1478 aa32.66■■■□□ 2.82
PUF60-219ENST00000532127 GRIN2BQ13224 1484 aa32.57■■■□□ 2.8
PUF60-219ENST00000532127 PBRM1Q86U86 1689 aa32.56■■■□□ 2.8
PUF60-219ENST00000532127 EEA1Q15075 1411 aa32.54■■■□□ 2.8
PUF60-219ENST00000532127 RUSC2Q8N2Y8 1516 aa32.53■■■□□ 2.8
PUF60-219ENST00000532127 ERICH3Q5RHP9 1530 aa32.52■■■□□ 2.8
PUF60-219ENST00000532127 MAGI1Q96QZ7 1491 aaPredicted RBP32.43■■■□□ 2.78
PUF60-219ENST00000532127 IGF1RP08069 1367 aa32.43■■■□□ 2.78
PUF60-219ENST00000532127 SNAPC4Q5SXM2 1469 aa32.42■■■□□ 2.78
PUF60-219ENST00000532127 CUL7Q14999 1698 aa32.38■■■□□ 2.77
PUF60-219ENST00000532127 ADAMTS12P58397 1594 aa32.36■■■□□ 2.77
PUF60-219ENST00000532127 FAM9AQ8IZU1 332 aaPredicted RBP32.32■■■□□ 2.76
PUF60-219ENST00000532127 CSRNP3Q8WYN3 585 aa32.32■■■□□ 2.76
PUF60-219ENST00000532127 FHAD1B1AJZ9 1412 aa32.32■■■□□ 2.76
PUF60-219ENST00000532127 SYNJ2O15056 1496 aa32.29■■■□□ 2.76
PUF60-219ENST00000532127 CARMIL1Q5VZK9 1371 aa32.26■■■□□ 2.75
PUF60-219ENST00000532127 PRXQ9BXM0 1461 aa32.23■■■□□ 2.75
PUF60-219ENST00000532127 CHMP7Q8WUX9 453 aaPredicted RBP32.17■■■□□ 2.74
PUF60-219ENST00000532127 CHD1O14646 1710 aa32.17■■■□□ 2.74
PUF60-219ENST00000532127 RAPGEF2Q9Y4G8 1499 aa32.16■■■□□ 2.74
PUF60-219ENST00000532127 GRIN2AQ12879 1464 aa32.16■■■□□ 2.74
PUF60-219ENST00000532127 KIF21BO75037 1637 aa32.15■■■□□ 2.74
PUF60-219ENST00000532127 FBLN2P98095 1184 aa32.12■■■□□ 2.73
PUF60-219ENST00000532127 GOLGA3Q08378 1498 aa32■■■□□ 2.71
PUF60-219ENST00000532127 NUP160Q12769 1436 aa31.99■■■□□ 2.71
PUF60-219ENST00000532127 CEP170Q5SW79 1584 aa31.96■■■□□ 2.71
PUF60-219ENST00000532127 OSCARQ8IYS5 282 aa31.9■■■□□ 2.7
PUF60-219ENST00000532127 CTTNBP2Q8WZ74 1663 aa31.85■■■□□ 2.69
PUF60-219ENST00000532127 CLASP1Q7Z460 1538 aa31.85■■■□□ 2.69
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms