RNA–Protein interactions for RNA: ENST00000532110.1

MKNK1-226, Transcript of MAP kinase interacting serine/threonine kinase 1, humanhuman

TSL 4

Gene MKNK1, Length 494 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKNK1-226ENST00000532110 NISCHQ9Y2I1 1504 aa26.89■■□□□ 1.89
MKNK1-226ENST00000532110 ABCC9O60706 1549 aa24.08■■□□□ 1.45
MKNK1-226ENST00000532110 CCDC180Q9P1Z9 1646 aa24.06■■□□□ 1.44
MKNK1-226ENST00000532110 RB1CC1Q8TDY2 1594 aa22.91■■□□□ 1.26
MKNK1-226ENST00000532110 DCAF8L2P0C7V8 631 aa22.84■■□□□ 1.25
MKNK1-226ENST00000532110 NACADO15069 1562 aa22.76■■□□□ 1.23
MKNK1-226ENST00000532110 DNAJC5BQ9UF47 199 aa22.58■■□□□ 1.21
MKNK1-226ENST00000532110 PABPN1Q86U42 306 aaKnown RBP eCLIP22.49■■□□□ 1.19
MKNK1-226ENST00000532110 MYO15BQ96JP2 1530 aa22.42■■□□□ 1.18
MKNK1-226ENST00000532110 UNC13AQ9UPW8 1703 aa22.41■■□□□ 1.18
MKNK1-226ENST00000532110 ZCCHC6Q5VYS8 1495 aaKnown RBP22.26■■□□□ 1.15
MKNK1-226ENST00000532110 BICRAQ9NZM4 1560 aa22.23■■□□□ 1.15
MKNK1-226ENST00000532110 DCAF1Q9Y4B6 1507 aa22.17■■□□□ 1.14
MKNK1-226ENST00000532110 SCRIBQ14160 1630 aa21.97■■□□□ 1.11
MKNK1-226ENST00000532110 SHROOM4Q9ULL8 1493 aa21.87■■□□□ 1.09
MKNK1-226ENST00000532110 CC2D2AQ9P2K1 1620 aa21.73■■□□□ 1.07
MKNK1-226ENST00000532110 EIF4G1Q04637 1599 aaKnown RBP21.68■■□□□ 1.06
MKNK1-226ENST00000532110 CECR2Q9BXF3 1484 aa21.67■■□□□ 1.06
MKNK1-226ENST00000532110 NCAPD3P42695 1498 aa21.02■□□□□ 0.96
MKNK1-226ENST00000532110 ATAD2BQ9ULI0 1458 aa20.97■□□□□ 0.95
MKNK1-226ENST00000532110 SMARCA4P51532 1647 aa20.95■□□□□ 0.94
MKNK1-226ENST00000532110 SMARCA2P51531 1590 aa20.9■□□□□ 0.94
MKNK1-226ENST00000532110 BAZ1AQ9NRL2 1556 aaPredicted RBP20.85■□□□□ 0.93
MKNK1-226ENST00000532110 HMGXB3Q12766 1538 aa20.83■□□□□ 0.92
MKNK1-226ENST00000532110 ERCC6Q03468 1493 aa20.78■□□□□ 0.92
MKNK1-226ENST00000532110 BAZ1BQ9UIG0 1483 aaKnown RBP20.77■□□□□ 0.92
MKNK1-226ENST00000532110 MROH2BQ7Z745 1585 aa20.73■□□□□ 0.91
MKNK1-226ENST00000532110 PEG3Q9GZU2 1588 aa20.71■□□□□ 0.91
MKNK1-226ENST00000532110 NESP48681 1621 aa20.7■□□□□ 0.9
MKNK1-226ENST00000532110 DNAJC5Q9H3Z4 198 aa20.68■□□□□ 0.9
MKNK1-226ENST00000532110 CUX2O14529 1486 aa20.68■□□□□ 0.9
MKNK1-226ENST00000532110 LAMC3Q9Y6N6 1575 aa20.52■□□□□ 0.88
MKNK1-226ENST00000532110 WIZO95785 1651 aa20.5■□□□□ 0.87
MKNK1-226ENST00000532110 PDS5BQ9NTI5 1447 aa20.44■□□□□ 0.86
MKNK1-226ENST00000532110 KIF21AQ7Z4S6 1674 aa20.42■□□□□ 0.86
MKNK1-226ENST00000532110 CADPSQ9ULU8 1353 aa20.41■□□□□ 0.86
MKNK1-226ENST00000532110 THOC2Q8NI27 1593 aaKnown RBP20.41■□□□□ 0.86
MKNK1-226ENST00000532110 RSF1Q96T23 1441 aaPredicted RBP20.33■□□□□ 0.84
MKNK1-226ENST00000532110 MRC2Q9UBG0 1479 aa20.24■□□□□ 0.83
MKNK1-226ENST00000532110 TOP2AP11388 1531 aaKnown RBP20.2■□□□□ 0.82
MKNK1-226ENST00000532110 FANCD2Q9BXW9 1451 aa20.17■□□□□ 0.82
MKNK1-226ENST00000532110 CEP164Q9UPV0 1460 aa20.17■□□□□ 0.82
MKNK1-226ENST00000532110 CFTRP13569 1480 aa20.16■□□□□ 0.82
MKNK1-226ENST00000532110 WDR62O43379 1518 aa20.16■□□□□ 0.82
MKNK1-226ENST00000532110 CCDC88BA6NC98 1476 aa20.02■□□□□ 0.8
MKNK1-226ENST00000532110 URB2Q14146 1524 aaKnown RBP19.98■□□□□ 0.79
MKNK1-226ENST00000532110 PRDM2Q13029 1718 aa19.96■□□□□ 0.79
MKNK1-226ENST00000532110 OSCARQ8IYS5 282 aa19.85■□□□□ 0.77
MKNK1-226ENST00000532110 TRIM41Q8WV44 630 aa19.84■□□□□ 0.77
MKNK1-226ENST00000532110 TOPBP1Q92547 1522 aa19.79■□□□□ 0.76
MKNK1-226ENST00000532110 IFT140Q96RY7 1462 aa19.77■□□□□ 0.76
MKNK1-226ENST00000532110 ABCC8Q09428 1581 aa19.76■□□□□ 0.75
MKNK1-226ENST00000532110 ZNF608Q9ULD9 1512 aaPredicted RBP19.75■□□□□ 0.75
MKNK1-226ENST00000532110 DNMBPQ6XZF7 1577 aa19.7■□□□□ 0.74
MKNK1-226ENST00000532110 AQRO60306 1485 aaKnown RBP eCLIP19.6■□□□□ 0.737e-6■■□□□ 12.2
MKNK1-226ENST00000532110 EIF4G3O43432 1585 aaKnown RBP19.6■□□□□ 0.73
MKNK1-226ENST00000532110 TARBP1Q13395 1621 aaKnown RBP19.59■□□□□ 0.73
MKNK1-226ENST00000532110 SUPT5HO00267 1087 aaKnown RBP19.59■□□□□ 0.73
MKNK1-226ENST00000532110 POLA1P09884 1462 aaPredicted RBP19.58■□□□□ 0.72
MKNK1-226ENST00000532110 RAD54L2Q9Y4B4 1467 aa19.55■□□□□ 0.72
MKNK1-226ENST00000532110 SOGA1O94964 1423 aa19.54■□□□□ 0.72
MKNK1-226ENST00000532110 FBLN2P98095 1184 aa19.53■□□□□ 0.72
MKNK1-226ENST00000532110 RIMBP3CA6NJZ7 1639 aa19.51■□□□□ 0.71
MKNK1-226ENST00000532110 RIMBP3BA6NNM3 1639 aa19.51■□□□□ 0.71
MKNK1-226ENST00000532110 RIMBP3Q9UFD9 1639 aa19.51■□□□□ 0.71
MKNK1-226ENST00000532110 TDRD9Q8NDG6 1382 aaKnown RBP19.5■□□□□ 0.71
MKNK1-226ENST00000532110 CHD1O14646 1710 aa19.48■□□□□ 0.71
MKNK1-226ENST00000532110 FGD5Q6ZNL6 1462 aa19.48■□□□□ 0.71
MKNK1-226ENST00000532110 CUX1P39880 1505 aa19.46■□□□□ 0.71
MKNK1-226ENST00000532110 ARHGEF11O15085 1522 aa19.44■□□□□ 0.7
MKNK1-226ENST00000532110 CYB5RLQ6IPT4 315 aa19.4■□□□□ 0.7
MKNK1-226ENST00000532110 CHMP7Q8WUX9 453 aaPredicted RBP19.37■□□□□ 0.69
MKNK1-226ENST00000532110 SNAPC4Q5SXM2 1469 aa19.36■□□□□ 0.69
MKNK1-226ENST00000532110 WDR97A6NE52 1622 aa19.36■□□□□ 0.69
MKNK1-226ENST00000532110 GRIN2BQ13224 1484 aa19.33■□□□□ 0.68
MKNK1-226ENST00000532110 MAGI1Q96QZ7 1491 aaPredicted RBP19.3■□□□□ 0.68
MKNK1-226ENST00000532110 GAPVD1Q14C86 1478 aa19.28■□□□□ 0.68
MKNK1-226ENST00000532110 SYNJ2O15056 1496 aa19.25■□□□□ 0.67
MKNK1-226ENST00000532110 ABCA10Q8WWZ4 1543 aa19.25■□□□□ 0.67
MKNK1-226ENST00000532110 PBRM1Q86U86 1689 aa19.24■□□□□ 0.67
MKNK1-226ENST00000532110 ARAP1Q96P48 1450 aa19.24■□□□□ 0.67
MKNK1-226ENST00000532110 SYNJ1O43426 1573 aa19.23■□□□□ 0.67
MKNK1-226ENST00000532110 CLASP1Q7Z460 1538 aa19.21■□□□□ 0.67
MKNK1-226ENST00000532110 WRNQ14191 1432 aaPredicted RBP eCLIP19.21■□□□□ 0.67
MKNK1-226ENST00000532110 ABCA5Q8WWZ7 1642 aa19.19■□□□□ 0.66
MKNK1-226ENST00000532110 TRHP20396 242 aaPredicted RBP19.17■□□□□ 0.66
MKNK1-226ENST00000532110 TOP2BQ02880 1626 aa19.16■□□□□ 0.66
MKNK1-226ENST00000532110 BIVM-ERCC5R4GMW8 1640 aa19.15■□□□□ 0.66
MKNK1-226ENST00000532110 GRIN2AQ12879 1464 aa19.07■□□□□ 0.64
MKNK1-226ENST00000532110 ADAMTS12P58397 1594 aa19.04■□□□□ 0.64
MKNK1-226ENST00000532110 FHAD1B1AJZ9 1412 aa19.03■□□□□ 0.64
MKNK1-226ENST00000532110 ERICH3Q5RHP9 1530 aa19■□□□□ 0.63
MKNK1-226ENST00000532110 NUP160Q12769 1436 aa19■□□□□ 0.63
MKNK1-226ENST00000532110 CEP170Q5SW79 1584 aa18.99■□□□□ 0.63
MKNK1-226ENST00000532110 ERCC6L2Q5T890 1561 aa18.96■□□□□ 0.63
MKNK1-226ENST00000532110 JPH4Q96JJ6 628 aa18.89■□□□□ 0.61
MKNK1-226ENST00000532110 SHROOM2Q13796 1616 aa18.89■□□□□ 0.61
MKNK1-226ENST00000532110 PRG4Q92954 1404 aaPredicted RBP18.85■□□□□ 0.61
MKNK1-226ENST00000532110 IGF1RP08069 1367 aa18.83■□□□□ 0.61
MKNK1-226ENST00000532110 KIF27Q86VH2 1401 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms