RNA–Protein interactions for RNA: ENST00000532066.1

TRIM44-202, Transcript of tripartite motif containing 44, humanhuman

TSL 4

Gene TRIM44, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM44-202ENST00000532066 AEBP2Q6ZN18 517 aaPredicted RBP22■■□□□ 1.11
TRIM44-202ENST00000532066 CHIC1Q5VXU3 224 aa20.82■□□□□ 0.92
TRIM44-202ENST00000532066 SENP3Q9H4L4 574 aaPredicted RBP18.83■□□□□ 0.6
TRIM44-202ENST00000532066 PHF23Q9BUL5 403 aaPredicted RBP18.55■□□□□ 0.56
TRIM44-202ENST00000532066 FOXD1Q16676 465 aa17.53■□□□□ 0.4
TRIM44-202ENST00000532066 NISCHQ9Y2I1 1504 aa17.33■□□□□ 0.37
TRIM44-202ENST00000532066 PLPPR3Q6T4P5 718 aa16.58■□□□□ 0.24
TRIM44-202ENST00000532066 MSH5O43196 834 aa16.48■□□□□ 0.23
TRIM44-202ENST00000532066 PIAS4Q8N2W9 510 aaPredicted RBP16.35■□□□□ 0.21
TRIM44-202ENST00000532066 PPP6R1Q9UPN7 881 aa16.29■□□□□ 0.2
TRIM44-202ENST00000532066 POTEDQ86YR6 584 aa16.26■□□□□ 0.19
TRIM44-202ENST00000532066 ADRA2BP18089 450 aa16.23■□□□□ 0.19
TRIM44-202ENST00000532066 CCDC180Q9P1Z9 1646 aa15.03■□□□□ -0
TRIM44-202ENST00000532066 MAPK8IP2Q13387 824 aaPredicted RBP14.93□□□□□ -0.02
TRIM44-202ENST00000532066 DMRT2Q9Y5R5 561 aa14.91□□□□□ -0.02
TRIM44-202ENST00000532066 SCAF1Q9H7N4 1312 aaKnown RBP14.9□□□□□ -0.02
TRIM44-202ENST00000532066 ZCCHC6Q5VYS8 1495 aaKnown RBP14.58□□□□□ -0.08
TRIM44-202ENST00000532066 PPP4R3CPQ6ZMV5 832 aa14.5□□□□□ -0.09
TRIM44-202ENST00000532066 DCAF1Q9Y4B6 1507 aa14.4□□□□□ -0.1
TRIM44-202ENST00000532066 HOXD11P31277 338 aaPredicted RBP14.32□□□□□ -0.12
TRIM44-202ENST00000532066 CNKSR2Q8WXI2 1034 aa14.28□□□□□ -0.12
TRIM44-202ENST00000532066 DCAF8L1A6NGE4 600 aa14.24□□□□□ -0.13
TRIM44-202ENST00000532066 DCAF8L2P0C7V8 631 aa14.24□□□□□ -0.13
TRIM44-202ENST00000532066 CACNB1Q02641 598 aaPredicted RBP14.19□□□□□ -0.14
TRIM44-202ENST00000532066 MYO15BQ96JP2 1530 aa14.19□□□□□ -0.14
TRIM44-202ENST00000532066 RNF216Q9NWF9 866 aaPredicted RBP14.18□□□□□ -0.14
TRIM44-202ENST00000532066 SHROOM4Q9ULL8 1493 aa14.17□□□□□ -0.14
TRIM44-202ENST00000532066 RNF39Q9H2S5 420 aa14.04□□□□□ -0.16
TRIM44-202ENST00000532066 NACADO15069 1562 aa14□□□□□ -0.17
TRIM44-202ENST00000532066 ABCC9O60706 1549 aa14□□□□□ -0.17
TRIM44-202ENST00000532066 NCBP3Q53F19 620 aaKnown RBP13.94□□□□□ -0.18
TRIM44-202ENST00000532066 DNAJC5BQ9UF47 199 aa13.91□□□□□ -0.18
TRIM44-202ENST00000532066 C1QBPQ07021 282 aaKnown RBP13.85□□□□□ -0.19
TRIM44-202ENST00000532066 RB1CC1Q8TDY2 1594 aa13.83□□□□□ -0.2
TRIM44-202ENST00000532066 SUPT5HO00267 1087 aaKnown RBP13.78□□□□□ -0.2
TRIM44-202ENST00000532066 SCRIBQ14160 1630 aa13.77□□□□□ -0.21
TRIM44-202ENST00000532066 NPM3O75607 178 aaKnown RBP13.7□□□□□ -0.22
TRIM44-202ENST00000532066 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.62□□□□□ -0.234e-7■■■■□ 23.1
TRIM44-202ENST00000532066 RSF1Q96T23 1441 aaPredicted RBP13.5□□□□□ -0.25
TRIM44-202ENST00000532066 BAZ1AQ9NRL2 1556 aaPredicted RBP13.4□□□□□ -0.26
TRIM44-202ENST00000532066 CECR2Q9BXF3 1484 aa13.38□□□□□ -0.27
TRIM44-202ENST00000532066 UNC13AQ9UPW8 1703 aa13.36□□□□□ -0.27
TRIM44-202ENST00000532066 MROH2BQ7Z745 1585 aa13.34□□□□□ -0.27
TRIM44-202ENST00000532066 KCNA4P22459 653 aa13.32□□□□□ -0.28
TRIM44-202ENST00000532066 U3KPZ7 1027 aaPredicted RBP13.32□□□□□ -0.28
TRIM44-202ENST00000532066 BICRAQ9NZM4 1560 aa13.3□□□□□ -0.28
TRIM44-202ENST00000532066 SMARCA4P51532 1647 aa13.25□□□□□ -0.29
TRIM44-202ENST00000532066 PABPN1Q86U42 306 aaKnown RBP eCLIP13.24□□□□□ -0.29
TRIM44-202ENST00000532066 WIZO95785 1651 aa13.2□□□□□ -0.3
TRIM44-202ENST00000532066 TOP2AP11388 1531 aaKnown RBP13.16□□□□□ -0.3
TRIM44-202ENST00000532066 SPINK5Q9NQ38 1064 aaPredicted RBP13.14□□□□□ -0.31
TRIM44-202ENST00000532066 CAPN15O75808 1086 aa13.13□□□□□ -0.31
TRIM44-202ENST00000532066 PEG3Q9GZU2 1588 aa13.12□□□□□ -0.31
TRIM44-202ENST00000532066 SLC4A2P04920 1241 aa13.12□□□□□ -0.31
TRIM44-202ENST00000532066 DSG3P32926 999 aa13.11□□□□□ -0.31
TRIM44-202ENST00000532066 SMARCA2P51531 1590 aa13.07□□□□□ -0.32
TRIM44-202ENST00000532066 ATAD2BQ9ULI0 1458 aa13.03□□□□□ -0.32
TRIM44-202ENST00000532066 TRIM41Q8WV44 630 aa13.02□□□□□ -0.33
TRIM44-202ENST00000532066 CCDC88BA6NC98 1476 aa13.02□□□□□ -0.33
TRIM44-202ENST00000532066 APLP2Q06481 763 aa12.99□□□□□ -0.33
TRIM44-202ENST00000532066 BAZ1BQ9UIG0 1483 aaKnown RBP12.97□□□□□ -0.33
TRIM44-202ENST00000532066 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.94□□□□□ -0.34
TRIM44-202ENST00000532066 HNRNPUL2Q1KMD3 747 aaKnown RBP12.94□□□□□ -0.34
TRIM44-202ENST00000532066 EIF4G1Q04637 1599 aaKnown RBP12.93□□□□□ -0.34
TRIM44-202ENST00000532066 NCAPD3P42695 1498 aa12.92□□□□□ -0.34
TRIM44-202ENST00000532066 HMGXB3Q12766 1538 aa12.91□□□□□ -0.34
TRIM44-202ENST00000532066 ZNF219Q9P2Y4 722 aaPredicted RBP12.9□□□□□ -0.34
TRIM44-202ENST00000532066 TRHP20396 242 aaPredicted RBP12.88□□□□□ -0.35
TRIM44-202ENST00000532066 SAMD1Q6SPF0 538 aaPredicted RBP12.86□□□□□ -0.35
TRIM44-202ENST00000532066 ABCB7O75027 752 aa12.8□□□□□ -0.36
TRIM44-202ENST00000532066 EEA1Q15075 1411 aa12.74□□□□□ -0.37
TRIM44-202ENST00000532066 LOC105371045A0A1W2PR82 267 aa12.74□□□□□ -0.37
TRIM44-202ENST00000532066 WRNQ14191 1432 aaPredicted RBP eCLIP12.73□□□□□ -0.37
TRIM44-202ENST00000532066 POTEHQ6S545 545 aa12.72□□□□□ -0.37
TRIM44-202ENST00000532066 ABCC8Q09428 1581 aa12.72□□□□□ -0.37
TRIM44-202ENST00000532066 MYCNP04198 464 aaPredicted RBP12.7□□□□□ -0.38
TRIM44-202ENST00000532066 FAM9AQ8IZU1 332 aaPredicted RBP12.69□□□□□ -0.38
TRIM44-202ENST00000532066 CC2D2AQ9P2K1 1620 aa12.67□□□□□ -0.38
TRIM44-202ENST00000532066 CFTRP13569 1480 aa12.66□□□□□ -0.38
TRIM44-202ENST00000532066 CADPSQ9ULU8 1353 aa12.6□□□□□ -0.39
TRIM44-202ENST00000532066 CSRNP3Q8WYN3 585 aa12.59□□□□□ -0.39
TRIM44-202ENST00000532066 SYNJ1O43426 1573 aa12.58□□□□□ -0.4
TRIM44-202ENST00000532066 TOP2BQ02880 1626 aa12.58□□□□□ -0.4
TRIM44-202ENST00000532066 SLC4A1APQ9BWU0 796 aaKnown RBP12.57□□□□□ -0.4
TRIM44-202ENST00000532066 SOGA1O94964 1423 aa12.56□□□□□ -0.4
TRIM44-202ENST00000532066 BIVM-ERCC5R4GMW8 1640 aa12.55□□□□□ -0.4
TRIM44-202ENST00000532066 RBM42Q9BTD8 480 aaKnown RBP12.54□□□□□ -0.4
TRIM44-202ENST00000532066 PRDM2Q13029 1718 aa12.52□□□□□ -0.41
TRIM44-202ENST00000532066 POLA2Q14181 598 aa12.52□□□□□ -0.41
TRIM44-202ENST00000532066 TNIKQ9UKE5 1360 aa12.51□□□□□ -0.41
TRIM44-202ENST00000532066 FOXD4L1Q9NU39 408 aa12.5□□□□□ -0.41
TRIM44-202ENST00000532066 GOLGA3Q08378 1498 aa12.5□□□□□ -0.41
TRIM44-202ENST00000532066 CEP164Q9UPV0 1460 aa12.5□□□□□ -0.41
TRIM44-202ENST00000532066 CUX1P39880 1505 aa12.47□□□□□ -0.41
TRIM44-202ENST00000532066 KIF21BO75037 1637 aa12.46□□□□□ -0.41
TRIM44-202ENST00000532066 RUSC2Q8N2Y8 1516 aa12.46□□□□□ -0.42
TRIM44-202ENST00000532066 LAMC3Q9Y6N6 1575 aa12.44□□□□□ -0.42
TRIM44-202ENST00000532066 UBTFP17480 764 aaKnown RBP12.44□□□□□ -0.42
TRIM44-202ENST00000532066 TRIM26Q12899 539 aaPredicted RBP12.44□□□□□ -0.42
TRIM44-202ENST00000532066 KIF27Q86VH2 1401 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms