RNA–Protein interactions for RNA: ENST00000531917.5

SSR2-217, Transcript of signal sequence receptor subunit 2, humanhuman

TSL 5

Gene SSR2, Length 555 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2-217ENST00000531917 NISCHQ9Y2I1 1504 aa36.34■■■■□ 3.41
SSR2-217ENST00000531917 CCDC180Q9P1Z9 1646 aa32.43■■■□□ 2.78
SSR2-217ENST00000531917 ABCC9O60706 1549 aa31.89■■■□□ 2.7
SSR2-217ENST00000531917 RB1CC1Q8TDY2 1594 aa30.65■■■□□ 2.5
SSR2-217ENST00000531917 NACADO15069 1562 aa30.58■■■□□ 2.49
SSR2-217ENST00000531917 DCAF8L2P0C7V8 631 aa30.48■■■□□ 2.47
SSR2-217ENST00000531917 MYO15BQ96JP2 1530 aa30.35■■■□□ 2.45
SSR2-217ENST00000531917 ZCCHC6Q5VYS8 1495 aaKnown RBP30.19■■■□□ 2.42
SSR2-217ENST00000531917 DCAF1Q9Y4B6 1507 aa30.11■■■□□ 2.41
SSR2-217ENST00000531917 UNC13AQ9UPW8 1703 aa29.84■■■□□ 2.37
SSR2-217ENST00000531917 PABPN1Q86U42 306 aaKnown RBP eCLIP29.77■■■□□ 2.36
SSR2-217ENST00000531917 BICRAQ9NZM4 1560 aa29.64■■■□□ 2.33
SSR2-217ENST00000531917 SCRIBQ14160 1630 aa29.49■■■□□ 2.31
SSR2-217ENST00000531917 DNAJC5BQ9UF47 199 aa29.46■■■□□ 2.31
SSR2-217ENST00000531917 SHROOM4Q9ULL8 1493 aa29.46■■■□□ 2.31
SSR2-217ENST00000531917 EIF4G1Q04637 1599 aaKnown RBP28.92■■■□□ 2.22
SSR2-217ENST00000531917 CC2D2AQ9P2K1 1620 aa28.84■■■□□ 2.21
SSR2-217ENST00000531917 CECR2Q9BXF3 1484 aa28.72■■■□□ 2.19
SSR2-217ENST00000531917 SMARCA4P51532 1647 aa28.22■■■□□ 2.11
SSR2-217ENST00000531917 NCAPD3P42695 1498 aa28.21■■■□□ 2.11
SSR2-217ENST00000531917 BAZ1AQ9NRL2 1556 aaPredicted RBP28.2■■■□□ 2.11
SSR2-217ENST00000531917 SMARCA2P51531 1590 aa28.15■■■□□ 2.1
SSR2-217ENST00000531917 ATAD2BQ9ULI0 1458 aa28.15■■■□□ 2.1
SSR2-217ENST00000531917 HMGXB3Q12766 1538 aa28.02■■■□□ 2.08
SSR2-217ENST00000531917 PEG3Q9GZU2 1588 aa27.98■■■□□ 2.07
SSR2-217ENST00000531917 MROH2BQ7Z745 1585 aa27.94■■■□□ 2.06
SSR2-217ENST00000531917 BAZ1BQ9UIG0 1483 aaKnown RBP27.92■■■□□ 2.06
SSR2-217ENST00000531917 WIZO95785 1651 aa27.62■■■□□ 2.01
SSR2-217ENST00000531917 RSF1Q96T23 1441 aaPredicted RBP27.58■■■□□ 2.01
SSR2-217ENST00000531917 ERCC6Q03468 1493 aa27.57■■■□□ 2
SSR2-217ENST00000531917 NESP48681 1621 aa27.49■■□□□ 1.99
SSR2-217ENST00000531917 LAMC3Q9Y6N6 1575 aa27.49■■□□□ 1.99
SSR2-217ENST00000531917 CUX2O14529 1486 aa27.38■■□□□ 1.97
SSR2-217ENST00000531917 CADPSQ9ULU8 1353 aa27.38■■□□□ 1.97
SSR2-217ENST00000531917 TOP2AP11388 1531 aaKnown RBP27.37■■□□□ 1.97
SSR2-217ENST00000531917 PDS5BQ9NTI5 1447 aa27.36■■□□□ 1.97
SSR2-217ENST00000531917 KIF21AQ7Z4S6 1674 aa27.17■■□□□ 1.94
SSR2-217ENST00000531917 THOC2Q8NI27 1593 aaKnown RBP27.14■■□□□ 1.94
SSR2-217ENST00000531917 CFTRP13569 1480 aa27.14■■□□□ 1.94
SSR2-217ENST00000531917 CCDC88BA6NC98 1476 aa27.04■■□□□ 1.92
SSR2-217ENST00000531917 MRC2Q9UBG0 1479 aa27.04■■□□□ 1.92
SSR2-217ENST00000531917 CEP164Q9UPV0 1460 aa27.03■■□□□ 1.92
SSR2-217ENST00000531917 FANCD2Q9BXW9 1451 aa27.02■■□□□ 1.92
SSR2-217ENST00000531917 WDR62O43379 1518 aa26.94■■□□□ 1.9
SSR2-217ENST00000531917 PRDM2Q13029 1718 aa26.89■■□□□ 1.9
SSR2-217ENST00000531917 DNAJC5Q9H3Z4 198 aa26.83■■□□□ 1.89
SSR2-217ENST00000531917 URB2Q14146 1524 aaKnown RBP26.73■■□□□ 1.87
SSR2-217ENST00000531917 SUPT5HO00267 1087 aaKnown RBP26.71■■□□□ 1.87
SSR2-217ENST00000531917 ABCC8Q09428 1581 aa26.66■■□□□ 1.86
SSR2-217ENST00000531917 TOPBP1Q92547 1522 aa26.56■■□□□ 1.84
SSR2-217ENST00000531917 DNMBPQ6XZF7 1577 aa26.52■■□□□ 1.84
SSR2-217ENST00000531917 IFT140Q96RY7 1462 aa26.49■■□□□ 1.83
SSR2-217ENST00000531917 POLA1P09884 1462 aaPredicted RBP26.3■■□□□ 1.8
SSR2-217ENST00000531917 ZNF608Q9ULD9 1512 aaPredicted RBP26.3■■□□□ 1.8
SSR2-217ENST00000531917 TARBP1Q13395 1621 aaKnown RBP26.26■■□□□ 1.79
SSR2-217ENST00000531917 OSCARQ8IYS5 282 aa26.25■■□□□ 1.79
SSR2-217ENST00000531917 SOGA1O94964 1423 aa26.24■■□□□ 1.79
SSR2-217ENST00000531917 CUX1P39880 1505 aa26.24■■□□□ 1.79
SSR2-217ENST00000531917 FGD5Q6ZNL6 1462 aa26.21■■□□□ 1.79
SSR2-217ENST00000531917 EIF4G3O43432 1585 aaKnown RBP26.2■■□□□ 1.78
SSR2-217ENST00000531917 RAD54L2Q9Y4B4 1467 aa26.17■■□□□ 1.78
SSR2-217ENST00000531917 AQRO60306 1485 aaKnown RBP eCLIP26.16■■□□□ 1.78
SSR2-217ENST00000531917 WDR97A6NE52 1622 aa26.14■■□□□ 1.78
SSR2-217ENST00000531917 TDRD9Q8NDG6 1382 aaKnown RBP26.08■■□□□ 1.77
SSR2-217ENST00000531917 WRNQ14191 1432 aaPredicted RBP eCLIP26.05■■□□□ 1.76
SSR2-217ENST00000531917 TOP2BQ02880 1626 aa25.99■■□□□ 1.75
SSR2-217ENST00000531917 ABCA10Q8WWZ4 1543 aa25.98■■□□□ 1.75
SSR2-217ENST00000531917 BIVM-ERCC5R4GMW8 1640 aa25.97■■□□□ 1.75
SSR2-217ENST00000531917 GRIN2BQ13224 1484 aa25.97■■□□□ 1.75
SSR2-217ENST00000531917 FBLN2P98095 1184 aa25.94■■□□□ 1.74
SSR2-217ENST00000531917 MAGI1Q96QZ7 1491 aaPredicted RBP25.93■■□□□ 1.74
SSR2-217ENST00000531917 GAPVD1Q14C86 1478 aa25.92■■□□□ 1.74
SSR2-217ENST00000531917 CHD1O14646 1710 aa25.91■■□□□ 1.74
SSR2-217ENST00000531917 SNAPC4Q5SXM2 1469 aa25.91■■□□□ 1.74
SSR2-217ENST00000531917 SYNJ1O43426 1573 aa25.9■■□□□ 1.74
SSR2-217ENST00000531917 CHMP7Q8WUX9 453 aaPredicted RBP25.87■■□□□ 1.73
SSR2-217ENST00000531917 ABCA5Q8WWZ7 1642 aa25.85■■□□□ 1.73
SSR2-217ENST00000531917 PBRM1Q86U86 1689 aa25.83■■□□□ 1.73
SSR2-217ENST00000531917 SYNJ2O15056 1496 aa25.82■■□□□ 1.72
SSR2-217ENST00000531917 TRIM41Q8WV44 630 aa25.79■■□□□ 1.72
SSR2-217ENST00000531917 RIMBP3CA6NJZ7 1639 aa25.74■■□□□ 1.71
SSR2-217ENST00000531917 RIMBP3BA6NNM3 1639 aa25.74■■□□□ 1.71
SSR2-217ENST00000531917 RIMBP3Q9UFD9 1639 aa25.74■■□□□ 1.71
SSR2-217ENST00000531917 ARHGEF11O15085 1522 aa25.72■■□□□ 1.71
SSR2-217ENST00000531917 ERICH3Q5RHP9 1530 aa25.68■■□□□ 1.7
SSR2-217ENST00000531917 CLASP1Q7Z460 1538 aa25.65■■□□□ 1.7
SSR2-217ENST00000531917 FHAD1B1AJZ9 1412 aa25.64■■□□□ 1.7
SSR2-217ENST00000531917 ADAMTS12P58397 1594 aa25.62■■□□□ 1.69
SSR2-217ENST00000531917 GRIN2AQ12879 1464 aa25.6■■□□□ 1.69
SSR2-217ENST00000531917 KIF27Q86VH2 1401 aa25.55■■□□□ 1.68
SSR2-217ENST00000531917 CYB5RLQ6IPT4 315 aa25.54■■□□□ 1.68
SSR2-217ENST00000531917 NUP160Q12769 1436 aa25.51■■□□□ 1.67
SSR2-217ENST00000531917 ARAP1Q96P48 1450 aa25.48■■□□□ 1.67
SSR2-217ENST00000531917 IGF1RP08069 1367 aa25.44■■□□□ 1.66
SSR2-217ENST00000531917 CEP170Q5SW79 1584 aa25.44■■□□□ 1.66
SSR2-217ENST00000531917 CUL7Q14999 1698 aa25.39■■□□□ 1.66
SSR2-217ENST00000531917 SHROOM2Q13796 1616 aa25.32■■□□□ 1.64
SSR2-217ENST00000531917 CARMIL1Q5VZK9 1371 aa25.31■■□□□ 1.64
SSR2-217ENST00000531917 JPH4Q96JJ6 628 aa25.29■■□□□ 1.64
SSR2-217ENST00000531917 KIAA0586Q9BVV6 1533 aa25.24■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms