RNA–Protein interactions for RNA: ENST00000531875.2

RECQL4-204, Transcript of RecQ like helicase 4, humanhuman

TSL 5

Gene RECQL4, Length 988 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RECQL4-204ENST00000531875 NISCHQ9Y2I1 1504 aa40.5■■■■■ 4.07
RECQL4-204ENST00000531875 ABCC9O60706 1549 aa36.97■■■■□ 3.51
RECQL4-204ENST00000531875 CCDC180Q9P1Z9 1646 aa36.51■■■■□ 3.43
RECQL4-204ENST00000531875 DNAJC5BQ9UF47 199 aa35.16■■■■□ 3.22
RECQL4-204ENST00000531875 RB1CC1Q8TDY2 1594 aa34.95■■■■□ 3.18
RECQL4-204ENST00000531875 NACADO15069 1562 aa34.62■■■■□ 3.13
RECQL4-204ENST00000531875 PABPN1Q86U42 306 aaKnown RBP eCLIP34.36■■■■□ 3.093e-7■■■■■ 39
RECQL4-204ENST00000531875 DCAF8L2P0C7V8 631 aa34.3■■■■□ 3.08
RECQL4-204ENST00000531875 UNC13AQ9UPW8 1703 aa34.23■■■■□ 3.07
RECQL4-204ENST00000531875 BICRAQ9NZM4 1560 aa34.05■■■■□ 3.04
RECQL4-204ENST00000531875 MYO15BQ96JP2 1530 aa34■■■■□ 3.03
RECQL4-204ENST00000531875 ZCCHC6Q5VYS8 1495 aaKnown RBP33.48■■■□□ 2.95
RECQL4-204ENST00000531875 SHROOM4Q9ULL8 1493 aa33.44■■■□□ 2.94
RECQL4-204ENST00000531875 DCAF1Q9Y4B6 1507 aa33.41■■■□□ 2.94
RECQL4-204ENST00000531875 CC2D2AQ9P2K1 1620 aa33.38■■■□□ 2.93
RECQL4-204ENST00000531875 CECR2Q9BXF3 1484 aa33.34■■■□□ 2.93
RECQL4-204ENST00000531875 SCRIBQ14160 1630 aa33.26■■■□□ 2.91
RECQL4-204ENST00000531875 EIF4G1Q04637 1599 aaKnown RBP33.2■■■□□ 2.91
RECQL4-204ENST00000531875 DNAJC5Q9H3Z4 198 aa32.54■■■□□ 2.8
RECQL4-204ENST00000531875 CUX2O14529 1486 aa32.02■■■□□ 2.72
RECQL4-204ENST00000531875 NCAPD3P42695 1498 aa31.99■■■□□ 2.71
RECQL4-204ENST00000531875 ERCC6Q03468 1493 aa31.9■■■□□ 2.7
RECQL4-204ENST00000531875 ATAD2BQ9ULI0 1458 aa31.84■■■□□ 2.69
RECQL4-204ENST00000531875 HMGXB3Q12766 1538 aa31.7■■■□□ 2.66
RECQL4-204ENST00000531875 SMARCA4P51532 1647 aa31.68■■■□□ 2.66
RECQL4-204ENST00000531875 SMARCA2P51531 1590 aa31.68■■■□□ 2.66
RECQL4-204ENST00000531875 NESP48681 1621 aa31.67■■■□□ 2.66
RECQL4-204ENST00000531875 BAZ1BQ9UIG0 1483 aaKnown RBP31.46■■■□□ 2.63
RECQL4-204ENST00000531875 THOC2Q8NI27 1593 aaKnown RBP31.43■■■□□ 2.62
RECQL4-204ENST00000531875 BAZ1AQ9NRL2 1556 aaPredicted RBP31.43■■■□□ 2.62
RECQL4-204ENST00000531875 PEG3Q9GZU2 1588 aa31.39■■■□□ 2.62
RECQL4-204ENST00000531875 LAMC3Q9Y6N6 1575 aa31.3■■■□□ 2.6
RECQL4-204ENST00000531875 MROH2BQ7Z745 1585 aa31.23■■■□□ 2.59
RECQL4-204ENST00000531875 KIF21AQ7Z4S6 1674 aa31.22■■■□□ 2.59
RECQL4-204ENST00000531875 PDS5BQ9NTI5 1447 aa31.12■■■□□ 2.57
RECQL4-204ENST00000531875 CADPSQ9ULU8 1353 aa30.98■■■□□ 2.55
RECQL4-204ENST00000531875 MRC2Q9UBG0 1479 aa30.91■■■□□ 2.54
RECQL4-204ENST00000531875 TRIM41Q8WV44 630 aa30.89■■■□□ 2.54
RECQL4-204ENST00000531875 WDR62O43379 1518 aa30.88■■■□□ 2.53
RECQL4-204ENST00000531875 WIZO95785 1651 aa30.82■■■□□ 2.52
RECQL4-204ENST00000531875 CEP164Q9UPV0 1460 aa30.69■■■□□ 2.5
RECQL4-204ENST00000531875 FANCD2Q9BXW9 1451 aa30.63■■■□□ 2.49
RECQL4-204ENST00000531875 CFTRP13569 1480 aa30.56■■■□□ 2.48
RECQL4-204ENST00000531875 OSCARQ8IYS5 282 aa30.46■■■□□ 2.47
RECQL4-204ENST00000531875 URB2Q14146 1524 aaKnown RBP30.45■■■□□ 2.47
RECQL4-204ENST00000531875 RSF1Q96T23 1441 aaPredicted RBP30.4■■■□□ 2.46
RECQL4-204ENST00000531875 TOP2AP11388 1531 aaKnown RBP30.37■■■□□ 2.45
RECQL4-204ENST00000531875 PRDM2Q13029 1718 aa30.18■■■□□ 2.42
RECQL4-204ENST00000531875 RIMBP3CA6NJZ7 1639 aa30.17■■■□□ 2.42
RECQL4-204ENST00000531875 RIMBP3BA6NNM3 1639 aa30.17■■■□□ 2.42
RECQL4-204ENST00000531875 RIMBP3Q9UFD9 1639 aa30.17■■■□□ 2.42
RECQL4-204ENST00000531875 ZNF608Q9ULD9 1512 aaPredicted RBP30.16■■■□□ 2.42
RECQL4-204ENST00000531875 IFT140Q96RY7 1462 aa30.09■■■□□ 2.41
RECQL4-204ENST00000531875 CCDC88BA6NC98 1476 aa30.06■■■□□ 2.4
RECQL4-204ENST00000531875 ARHGEF11O15085 1522 aa30.02■■■□□ 2.4
RECQL4-204ENST00000531875 TOPBP1Q92547 1522 aa30.01■■■□□ 2.4
RECQL4-204ENST00000531875 EIF4G3O43432 1585 aaKnown RBP29.94■■■□□ 2.38
RECQL4-204ENST00000531875 DNMBPQ6XZF7 1577 aa29.86■■■□□ 2.37
RECQL4-204ENST00000531875 ABCC8Q09428 1581 aa29.85■■■□□ 2.37
RECQL4-204ENST00000531875 TARBP1Q13395 1621 aaKnown RBP29.81■■■□□ 2.36
RECQL4-204ENST00000531875 AQRO60306 1485 aaKnown RBP eCLIP29.8■■■□□ 2.361e-6■■■■■ 33.8
RECQL4-204ENST00000531875 CYB5RLQ6IPT4 315 aa29.8■■■□□ 2.36
RECQL4-204ENST00000531875 CHD1O14646 1710 aa29.79■■■□□ 2.36
RECQL4-204ENST00000531875 ARAP1Q96P48 1450 aa29.72■■■□□ 2.35
RECQL4-204ENST00000531875 POLA1P09884 1462 aaPredicted RBP29.69■■■□□ 2.34
RECQL4-204ENST00000531875 FBLN2P98095 1184 aa29.63■■■□□ 2.33
RECQL4-204ENST00000531875 RAD54L2Q9Y4B4 1467 aa29.6■■■□□ 2.33
RECQL4-204ENST00000531875 TRHP20396 242 aaPredicted RBP29.56■■■□□ 2.32
RECQL4-204ENST00000531875 TDRD9Q8NDG6 1382 aaKnown RBP29.54■■■□□ 2.32
RECQL4-204ENST00000531875 SOGA1O94964 1423 aa29.52■■■□□ 2.32
RECQL4-204ENST00000531875 SNAPC4Q5SXM2 1469 aa29.47■■■□□ 2.31
RECQL4-204ENST00000531875 CLASP1Q7Z460 1538 aa29.46■■■□□ 2.31
RECQL4-204ENST00000531875 FGD5Q6ZNL6 1462 aa29.43■■■□□ 2.3
RECQL4-204ENST00000531875 WDR97A6NE52 1622 aa29.4■■■□□ 2.3
RECQL4-204ENST00000531875 CUX1P39880 1505 aa29.36■■■□□ 2.29
RECQL4-204ENST00000531875 MAGI1Q96QZ7 1491 aaPredicted RBP29.35■■■□□ 2.29
RECQL4-204ENST00000531875 SYNJ1O43426 1573 aa29.34■■■□□ 2.29
RECQL4-204ENST00000531875 CHMP7Q8WUX9 453 aaPredicted RBP29.33■■■□□ 2.29
RECQL4-204ENST00000531875 GRIN2BQ13224 1484 aa29.3■■■□□ 2.28
RECQL4-204ENST00000531875 SUPT5HO00267 1087 aaKnown RBP29.29■■■□□ 2.28
RECQL4-204ENST00000531875 SYNJ2O15056 1496 aa29.28■■■□□ 2.28
RECQL4-204ENST00000531875 PBRM1Q86U86 1689 aa29.17■■■□□ 2.26
RECQL4-204ENST00000531875 GAPVD1Q14C86 1478 aa29.15■■■□□ 2.26
RECQL4-204ENST00000531875 ABCA5Q8WWZ7 1642 aa29.09■■■□□ 2.25
RECQL4-204ENST00000531875 ABCA10Q8WWZ4 1543 aa29.07■■■□□ 2.24
RECQL4-204ENST00000531875 ERCC6L2Q5T890 1561 aa29.01■■■□□ 2.24
RECQL4-204ENST00000531875 AEBP2Q6ZN18 517 aaPredicted RBP28.99■■■□□ 2.23
RECQL4-204ENST00000531875 GRIN2AQ12879 1464 aa28.94■■■□□ 2.22
RECQL4-204ENST00000531875 CEP170Q5SW79 1584 aa28.9■■■□□ 2.22
RECQL4-204ENST00000531875 ADAMTS12P58397 1594 aa28.88■■■□□ 2.21
RECQL4-204ENST00000531875 NUP160Q12769 1436 aa28.88■■■□□ 2.21
RECQL4-204ENST00000531875 WRNQ14191 1432 aaPredicted RBP eCLIP28.83■■■□□ 2.21
RECQL4-204ENST00000531875 SHROOM2Q13796 1616 aa28.81■■■□□ 2.2
RECQL4-204ENST00000531875 FHAD1B1AJZ9 1412 aa28.76■■■□□ 2.19
RECQL4-204ENST00000531875 BIVM-ERCC5R4GMW8 1640 aa28.75■■■□□ 2.19
RECQL4-204ENST00000531875 TOP2BQ02880 1626 aa28.74■■■□□ 2.19
RECQL4-204ENST00000531875 ERICH3Q5RHP9 1530 aa28.68■■■□□ 2.18
RECQL4-204ENST00000531875 KIF13AQ9H1H9 1805 aa28.67■■■□□ 2.18
RECQL4-204ENST00000531875 PRG4Q92954 1404 aaPredicted RBP28.61■■■□□ 2.17
RECQL4-204ENST00000531875 JPH4Q96JJ6 628 aa28.55■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms