RNA–Protein interactions for RNA: ENST00000531590.1

LRFN4-203, Transcript of leucine rich repeat and fibronectin type III domain containing 4, humanhuman

TSL 3

Gene LRFN4, Length 274 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4-203ENST00000531590 NISCHQ9Y2I1 1504 aa39.09■■■■□ 3.85
LRFN4-203ENST00000531590 CCDC180Q9P1Z9 1646 aa34.5■■■■□ 3.11
LRFN4-203ENST00000531590 ABCC9O60706 1549 aa33.6■■■□□ 2.97
LRFN4-203ENST00000531590 ZCCHC6Q5VYS8 1495 aaKnown RBP32.66■■■□□ 2.82
LRFN4-203ENST00000531590 DCAF8L2P0C7V8 631 aa32.56■■■□□ 2.8
LRFN4-203ENST00000531590 NACADO15069 1562 aa32.41■■■□□ 2.78
LRFN4-203ENST00000531590 RB1CC1Q8TDY2 1594 aa32.36■■■□□ 2.77
LRFN4-203ENST00000531590 MYO15BQ96JP2 1530 aa32.34■■■□□ 2.77
LRFN4-203ENST00000531590 DCAF1Q9Y4B6 1507 aa32.33■■■□□ 2.77
LRFN4-203ENST00000531590 SCRIBQ14160 1630 aa31.6■■■□□ 2.65
LRFN4-203ENST00000531590 UNC13AQ9UPW8 1703 aa31.55■■■□□ 2.64
LRFN4-203ENST00000531590 PABPN1Q86U42 306 aaKnown RBP eCLIP31.49■■■□□ 2.63
LRFN4-203ENST00000531590 BICRAQ9NZM4 1560 aa31.43■■■□□ 2.62
LRFN4-203ENST00000531590 SHROOM4Q9ULL8 1493 aa31.15■■■□□ 2.58
LRFN4-203ENST00000531590 DNAJC5BQ9UF47 199 aa30.61■■■□□ 2.49
LRFN4-203ENST00000531590 EIF4G1Q04637 1599 aaKnown RBP30.57■■■□□ 2.48
LRFN4-203ENST00000531590 CECR2Q9BXF3 1484 aa30.48■■■□□ 2.47
LRFN4-203ENST00000531590 CC2D2AQ9P2K1 1620 aa30.35■■■□□ 2.45
LRFN4-203ENST00000531590 BAZ1AQ9NRL2 1556 aaPredicted RBP30.24■■■□□ 2.43
LRFN4-203ENST00000531590 SMARCA4P51532 1647 aa30.23■■■□□ 2.43
LRFN4-203ENST00000531590 MROH2BQ7Z745 1585 aa30.17■■■□□ 2.42
LRFN4-203ENST00000531590 ATAD2BQ9ULI0 1458 aa30.06■■■□□ 2.4
LRFN4-203ENST00000531590 NCAPD3P42695 1498 aa29.96■■■□□ 2.39
LRFN4-203ENST00000531590 RSF1Q96T23 1441 aaPredicted RBP29.96■■■□□ 2.39
LRFN4-203ENST00000531590 SMARCA2P51531 1590 aa29.94■■■□□ 2.38
LRFN4-203ENST00000531590 PEG3Q9GZU2 1588 aa29.94■■■□□ 2.38
LRFN4-203ENST00000531590 HMGXB3Q12766 1538 aa29.81■■■□□ 2.36
LRFN4-203ENST00000531590 WIZO95785 1651 aa29.8■■■□□ 2.36
LRFN4-203ENST00000531590 BAZ1BQ9UIG0 1483 aaKnown RBP29.79■■■□□ 2.36
LRFN4-203ENST00000531590 TOP2AP11388 1531 aaKnown RBP29.51■■■□□ 2.32
LRFN4-203ENST00000531590 SUPT5HO00267 1087 aaKnown RBP29.44■■■□□ 2.3
LRFN4-203ENST00000531590 CCDC88BA6NC98 1476 aa29.22■■■□□ 2.27
LRFN4-203ENST00000531590 NESP48681 1621 aa29.17■■■□□ 2.26
LRFN4-203ENST00000531590 CADPSQ9ULU8 1353 aa29.13■■■□□ 2.25
LRFN4-203ENST00000531590 LAMC3Q9Y6N6 1575 aa29.06■■■□□ 2.24
LRFN4-203ENST00000531590 CFTRP13569 1480 aa29.01■■■□□ 2.23
LRFN4-203ENST00000531590 PDS5BQ9NTI5 1447 aa28.89■■■□□ 2.22
LRFN4-203ENST00000531590 ERCC6Q03468 1493 aa28.88■■■□□ 2.21
LRFN4-203ENST00000531590 FANCD2Q9BXW9 1451 aa28.78■■■□□ 2.2
LRFN4-203ENST00000531590 KIF21AQ7Z4S6 1674 aa28.72■■■□□ 2.19
LRFN4-203ENST00000531590 CEP164Q9UPV0 1460 aa28.69■■■□□ 2.18
LRFN4-203ENST00000531590 PRDM2Q13029 1718 aa28.61■■■□□ 2.17
LRFN4-203ENST00000531590 THOC2Q8NI27 1593 aaKnown RBP28.61■■■□□ 2.17
LRFN4-203ENST00000531590 MRC2Q9UBG0 1479 aa28.59■■■□□ 2.17
LRFN4-203ENST00000531590 URB2Q14146 1524 aaKnown RBP28.48■■■□□ 2.15
LRFN4-203ENST00000531590 WDR62O43379 1518 aa28.48■■■□□ 2.15
LRFN4-203ENST00000531590 CUX2O14529 1486 aa28.45■■■□□ 2.14
LRFN4-203ENST00000531590 TOPBP1Q92547 1522 aa28.35■■■□□ 2.13
LRFN4-203ENST00000531590 DNMBPQ6XZF7 1577 aa28.31■■■□□ 2.12
LRFN4-203ENST00000531590 ABCC8Q09428 1581 aa28.29■■■□□ 2.12
LRFN4-203ENST00000531590 CUX1P39880 1505 aa28.28■■■□□ 2.12
LRFN4-203ENST00000531590 WRNQ14191 1432 aaPredicted RBP eCLIP28.2■■■□□ 2.11
LRFN4-203ENST00000531590 POLA1P09884 1462 aaPredicted RBP28.15■■■□□ 2.1
LRFN4-203ENST00000531590 FGD5Q6ZNL6 1462 aa28.12■■■□□ 2.09
LRFN4-203ENST00000531590 SYNJ1O43426 1573 aa28.11■■■□□ 2.09
LRFN4-203ENST00000531590 IFT140Q96RY7 1462 aa28.08■■■□□ 2.09
LRFN4-203ENST00000531590 TOP2BQ02880 1626 aa28.06■■■□□ 2.08
LRFN4-203ENST00000531590 RAD54L2Q9Y4B4 1467 aa28.05■■■□□ 2.08
LRFN4-203ENST00000531590 BIVM-ERCC5R4GMW8 1640 aa28.03■■■□□ 2.08
LRFN4-203ENST00000531590 SOGA1O94964 1423 aa28.02■■■□□ 2.08
LRFN4-203ENST00000531590 TARBP1Q13395 1621 aaKnown RBP27.99■■■□□ 2.07
LRFN4-203ENST00000531590 ZNF608Q9ULD9 1512 aaPredicted RBP27.98■■■□□ 2.07
LRFN4-203ENST00000531590 TDRD9Q8NDG6 1382 aaKnown RBP27.86■■■□□ 2.05
LRFN4-203ENST00000531590 AQRO60306 1485 aaKnown RBP eCLIP27.86■■■□□ 2.052e-9■■■■□ 19.4
LRFN4-203ENST00000531590 ABCA10Q8WWZ4 1543 aa27.85■■■□□ 2.05
LRFN4-203ENST00000531590 EIF4G3O43432 1585 aaKnown RBP27.82■■■□□ 2.04
LRFN4-203ENST00000531590 WDR97A6NE52 1622 aa27.79■■■□□ 2.04
LRFN4-203ENST00000531590 TRIM41Q8WV44 630 aa27.77■■■□□ 2.04
LRFN4-203ENST00000531590 GAPVD1Q14C86 1478 aa27.7■■■□□ 2.02
LRFN4-203ENST00000531590 ABCA5Q8WWZ7 1642 aa27.68■■■□□ 2.02
LRFN4-203ENST00000531590 CHIC1Q5VXU3 224 aa27.68■■■□□ 2.02
LRFN4-203ENST00000531590 GRIN2BQ13224 1484 aa27.64■■■□□ 2.02
LRFN4-203ENST00000531590 SNAPC4Q5SXM2 1469 aa27.6■■■□□ 2.01
LRFN4-203ENST00000531590 KIF27Q86VH2 1401 aa27.57■■■□□ 2
LRFN4-203ENST00000531590 MAGI1Q96QZ7 1491 aaPredicted RBP27.52■■■□□ 2
LRFN4-203ENST00000531590 PBRM1Q86U86 1689 aa27.52■■■□□ 2
LRFN4-203ENST00000531590 ERICH3Q5RHP9 1530 aa27.5■■□□□ 1.99
LRFN4-203ENST00000531590 RUSC2Q8N2Y8 1516 aa27.49■■□□□ 1.99
LRFN4-203ENST00000531590 IGF1RP08069 1367 aa27.47■■□□□ 1.99
LRFN4-203ENST00000531590 FBLN2P98095 1184 aa27.43■■□□□ 1.98
LRFN4-203ENST00000531590 SYNJ2O15056 1496 aa27.43■■□□□ 1.98
LRFN4-203ENST00000531590 ADAMTS12P58397 1594 aa27.41■■□□□ 1.98
LRFN4-203ENST00000531590 DNAJC5Q9H3Z4 198 aa27.4■■□□□ 1.98
LRFN4-203ENST00000531590 CHMP7Q8WUX9 453 aaPredicted RBP27.39■■□□□ 1.98
LRFN4-203ENST00000531590 FHAD1B1AJZ9 1412 aa27.39■■□□□ 1.97
LRFN4-203ENST00000531590 OSCARQ8IYS5 282 aa27.34■■□□□ 1.97
LRFN4-203ENST00000531590 CHD1O14646 1710 aa27.32■■□□□ 1.96
LRFN4-203ENST00000531590 GRIN2AQ12879 1464 aa27.3■■□□□ 1.96
LRFN4-203ENST00000531590 CARMIL1Q5VZK9 1371 aa27.29■■□□□ 1.96
LRFN4-203ENST00000531590 CUL7Q14999 1698 aa27.25■■□□□ 1.95
LRFN4-203ENST00000531590 EEA1Q15075 1411 aa27.24■■□□□ 1.95
LRFN4-203ENST00000531590 FAM9AQ8IZU1 332 aaPredicted RBP27.22■■□□□ 1.95
LRFN4-203ENST00000531590 CSRNP3Q8WYN3 585 aa27.2■■□□□ 1.94
LRFN4-203ENST00000531590 NUP160Q12769 1436 aa27.18■■□□□ 1.94
LRFN4-203ENST00000531590 PRXQ9BXM0 1461 aa27.17■■□□□ 1.94
LRFN4-203ENST00000531590 CEP170Q5SW79 1584 aa27.14■■□□□ 1.94
LRFN4-203ENST00000531590 RAPGEF2Q9Y4G8 1499 aa27.14■■□□□ 1.94
LRFN4-203ENST00000531590 CLASP1Q7Z460 1538 aa27.13■■□□□ 1.93
LRFN4-203ENST00000531590 KIAA0586Q9BVV6 1533 aa26.97■■□□□ 1.91
LRFN4-203ENST00000531590 ARHGEF11O15085 1522 aa26.92■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms