RNA–Protein interactions for RNA: ENST00000531467.5

ABCA7-214, Transcript of ATP binding cassette subfamily A member 7, human

TSL 5

Gene ABCA7, Length 569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Exosome, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCA7-214	ENST00000531467	NISCH	Q9Y2I1	1504 aa		33.02	■■■□□ 2.88
ABCA7-214	ENST00000531467	ABCC9	O60706	1549 aa		30.24	■■■□□ 2.43
ABCA7-214	ENST00000531467	CCDC180	Q9P1Z9	1646 aa		29.74	■■■□□ 2.35
ABCA7-214	ENST00000531467	DNAJC5B	Q9UF47	199 aa		28.77	■■■□□ 2.2
ABCA7-214	ENST00000531467	RB1CC1	Q8TDY2	1594 aa		28.56	■■■□□ 2.16
ABCA7-214	ENST00000531467	NACAD	O15069	1562 aa		28.26	■■■□□ 2.11
ABCA7-214	ENST00000531467	DCAF8L2	P0C7V8	631 aa		28.17	■■■□□ 2.1
ABCA7-214	ENST00000531467	PABPN1	Q86U42	306 aa	Known RBP eCLIP	28.13	■■■□□ 2.09
ABCA7-214	ENST00000531467	UNC13A	Q9UPW8	1703 aa		27.87	■■■□□ 2.05
ABCA7-214	ENST00000531467	BICRA	Q9NZM4	1560 aa		27.73	■■■□□ 2.03
ABCA7-214	ENST00000531467	MYO15B	Q96JP2	1530 aa		27.71	■■■□□ 2.03
ABCA7-214	ENST00000531467	SHROOM4	Q9ULL8	1493 aa		27.29	■■□□□ 1.96
ABCA7-214	ENST00000531467	CECR2	Q9BXF3	1484 aa		27.27	■■□□□ 1.96
ABCA7-214	ENST00000531467	CC2D2A	Q9P2K1	1620 aa		27.26	■■□□□ 1.95
ABCA7-214	ENST00000531467	ZCCHC6	Q5VYS8	1495 aa	Known RBP	27.25	■■□□□ 1.95
ABCA7-214	ENST00000531467	DCAF1	Q9Y4B6	1507 aa		27.21	■■□□□ 1.95
ABCA7-214	ENST00000531467	SCRIB	Q14160	1630 aa		27.13	■■□□□ 1.93
ABCA7-214	ENST00000531467	EIF4G1	Q04637	1599 aa	Known RBP	27.09	■■□□□ 1.93
ABCA7-214	ENST00000531467	DNAJC5	Q9H3Z4	198 aa		26.7	■■□□□ 1.86
ABCA7-214	ENST00000531467	CUX2	O14529	1486 aa		26.19	■■□□□ 1.78
ABCA7-214	ENST00000531467	ERCC6	Q03468	1493 aa		26.14	■■□□□ 1.78
ABCA7-214	ENST00000531467	NCAPD3	P42695	1498 aa		26.11	■■□□□ 1.77
ABCA7-214	ENST00000531467	ATAD2B	Q9ULI0	1458 aa		25.98	■■□□□ 1.75
ABCA7-214	ENST00000531467	SMARCA2	P51531	1590 aa		25.86	■■□□□ 1.73
ABCA7-214	ENST00000531467	NES	P48681	1621 aa		25.85	■■□□□ 1.73
ABCA7-214	ENST00000531467	HMGXB3	Q12766	1538 aa		25.84	■■□□□ 1.73
ABCA7-214	ENST00000531467	SMARCA4	P51532	1647 aa		25.82	■■□□□ 1.72
ABCA7-214	ENST00000531467	BAZ1B	Q9UIG0	1483 aa	Known RBP	25.71	■■□□□ 1.71
ABCA7-214	ENST00000531467	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	25.65	■■□□□ 1.7
ABCA7-214	ENST00000531467	THOC2	Q8NI27	1593 aa	Known RBP	25.61	■■□□□ 1.69
ABCA7-214	ENST00000531467	LAMC3	Q9Y6N6	1575 aa		25.56	■■□□□ 1.68
ABCA7-214	ENST00000531467	PEG3	Q9GZU2	1588 aa		25.56	■■□□□ 1.68
ABCA7-214	ENST00000531467	PDS5B	Q9NTI5	1447 aa		25.47	■■□□□ 1.67
ABCA7-214	ENST00000531467	KIF21A	Q7Z4S6	1674 aa		25.45	■■□□□ 1.67
ABCA7-214	ENST00000531467	MROH2B	Q7Z745	1585 aa		25.44	■■□□□ 1.66
ABCA7-214	ENST00000531467	TRIM41	Q8WV44	630 aa		25.41	■■□□□ 1.66
ABCA7-214	ENST00000531467	CADPS	Q9ULU8	1353 aa		25.32	■■□□□ 1.64
ABCA7-214	ENST00000531467	MRC2	Q9UBG0	1479 aa		25.26	■■□□□ 1.63
ABCA7-214	ENST00000531467	WDR62	O43379	1518 aa		25.18	■■□□□ 1.62
ABCA7-214	ENST00000531467	WIZ	O95785	1651 aa		25.11	■■□□□ 1.61
ABCA7-214	ENST00000531467	CEP164	Q9UPV0	1460 aa		25.09	■■□□□ 1.61
ABCA7-214	ENST00000531467	FANCD2	Q9BXW9	1451 aa		25.02	■■□□□ 1.6
ABCA7-214	ENST00000531467	OSCAR	Q8IYS5	282 aa		25	■■□□□ 1.59
ABCA7-214	ENST00000531467	CFTR	P13569	1480 aa		24.92	■■□□□ 1.58
ABCA7-214	ENST00000531467	URB2	Q14146	1524 aa	Known RBP	24.84	■■□□□ 1.57
ABCA7-214	ENST00000531467	RSF1	Q96T23	1441 aa	Predicted RBP	24.78	■■□□□ 1.56
ABCA7-214	ENST00000531467	TOP2A	P11388	1531 aa	Known RBP	24.76	■■□□□ 1.55
ABCA7-214	ENST00000531467	RIMBP3C	A6NJZ7	1639 aa		24.65	■■□□□ 1.54
ABCA7-214	ENST00000531467	RIMBP3B	A6NNM3	1639 aa		24.65	■■□□□ 1.54
ABCA7-214	ENST00000531467	RIMBP3	Q9UFD9	1639 aa		24.65	■■□□□ 1.54
ABCA7-214	ENST00000531467	ZNF608	Q9ULD9	1512 aa	Predicted RBP	24.61	■■□□□ 1.53
ABCA7-214	ENST00000531467	IFT140	Q96RY7	1462 aa		24.59	■■□□□ 1.53
ABCA7-214	ENST00000531467	PRDM2	Q13029	1718 aa		24.56	■■□□□ 1.52
ABCA7-214	ENST00000531467	ARHGEF11	O15085	1522 aa		24.54	■■□□□ 1.52
ABCA7-214	ENST00000531467	CCDC88B	A6NC98	1476 aa		24.51	■■□□□ 1.51
ABCA7-214	ENST00000531467	TOPBP1	Q92547	1522 aa		24.5	■■□□□ 1.51
ABCA7-214	ENST00000531467	CYB5RL	Q6IPT4	315 aa		24.46	■■□□□ 1.51
ABCA7-214	ENST00000531467	EIF4G3	O43432	1585 aa	Known RBP	24.42	■■□□□ 1.5
ABCA7-214	ENST00000531467	ABCC8	Q09428	1581 aa		24.42	■■□□□ 1.5
ABCA7-214	ENST00000531467	AQR	O60306	1485 aa	Known RBP eCLIP	24.36	■■□□□ 1.49
ABCA7-214	ENST00000531467	DNMBP	Q6XZF7	1577 aa		24.35	■■□□□ 1.49
ABCA7-214	ENST00000531467	TRH	P20396	242 aa	Predicted RBP	24.34	■■□□□ 1.49
ABCA7-214	ENST00000531467	FBLN2	P98095	1184 aa		24.33	■■□□□ 1.49
ABCA7-214	ENST00000531467	CHD1	O14646	1710 aa		24.3	■■□□□ 1.48
ABCA7-214	ENST00000531467	TARBP1	Q13395	1621 aa	Known RBP	24.29	■■□□□ 1.48
ABCA7-214	ENST00000531467	ARAP1	Q96P48	1450 aa		24.27	■■□□□ 1.48
ABCA7-214	ENST00000531467	POLA1	P09884	1462 aa	Predicted RBP	24.22	■■□□□ 1.47
ABCA7-214	ENST00000531467	RAD54L2	Q9Y4B4	1467 aa		24.17	■■□□□ 1.46
ABCA7-214	ENST00000531467	TDRD9	Q8NDG6	1382 aa	Known RBP	24.16	■■□□□ 1.46
ABCA7-214	ENST00000531467	SOGA1	O94964	1423 aa		24.14	■■□□□ 1.45
ABCA7-214	ENST00000531467	SNAPC4	Q5SXM2	1469 aa		24.07	■■□□□ 1.44
ABCA7-214	ENST00000531467	CHMP7	Q8WUX9	453 aa	Predicted RBP	24.06	■■□□□ 1.44
ABCA7-214	ENST00000531467	CLASP1	Q7Z460	1538 aa		24.02	■■□□□ 1.44
ABCA7-214	ENST00000531467	FGD5	Q6ZNL6	1462 aa		24.01	■■□□□ 1.43
ABCA7-214	ENST00000531467	SYNJ1	O43426	1573 aa		23.99	■■□□□ 1.43
ABCA7-214	ENST00000531467	WDR97	A6NE52	1622 aa		23.99	■■□□□ 1.43
ABCA7-214	ENST00000531467	MAGI1	Q96QZ7	1491 aa	Predicted RBP	23.97	■■□□□ 1.43
ABCA7-214	ENST00000531467	GRIN2B	Q13224	1484 aa		23.95	■■□□□ 1.42
ABCA7-214	ENST00000531467	AEBP2	Q6ZN18	517 aa	Predicted RBP	23.93	■■□□□ 1.42
ABCA7-214	ENST00000531467	CUX1	P39880	1505 aa		23.93	■■□□□ 1.42
ABCA7-214	ENST00000531467	SYNJ2	O15056	1496 aa		23.91	■■□□□ 1.42
ABCA7-214	ENST00000531467	SUPT5H	O00267	1087 aa	Known RBP	23.84	■■□□□ 1.41
ABCA7-214	ENST00000531467	GAPVD1	Q14C86	1478 aa		23.83	■■□□□ 1.41
ABCA7-214	ENST00000531467	PBRM1	Q86U86	1689 aa		23.78	■■□□□ 1.4
ABCA7-214	ENST00000531467	ABCA10	Q8WWZ4	1543 aa		23.7	■■□□□ 1.38
ABCA7-214	ENST00000531467	ABCA5	Q8WWZ7	1642 aa		23.69	■■□□□ 1.38
ABCA7-214	ENST00000531467	ERCC6L2	Q5T890	1561 aa		23.65	■■□□□ 1.38
ABCA7-214	ENST00000531467	GRIN2A	Q12879	1464 aa		23.63	■■□□□ 1.37
ABCA7-214	ENST00000531467	CEP170	Q5SW79	1584 aa		23.57	■■□□□ 1.36
ABCA7-214	ENST00000531467	NUP160	Q12769	1436 aa		23.56	■■□□□ 1.36
ABCA7-214	ENST00000531467	WRN	Q14191	1432 aa	Predicted RBP eCLIP	23.56	■■□□□ 1.36
ABCA7-214	ENST00000531467	ADAMTS12	P58397	1594 aa		23.53	■■□□□ 1.36
ABCA7-214	ENST00000531467	FHAD1	B1AJZ9	1412 aa		23.5	■■□□□ 1.35
ABCA7-214	ENST00000531467	SHROOM2	Q13796	1616 aa		23.48	■■□□□ 1.35
ABCA7-214	ENST00000531467	TOP2B	Q02880	1626 aa		23.41	■■□□□ 1.34
ABCA7-214	ENST00000531467	PRG4	Q92954	1404 aa	Predicted RBP	23.41	■■□□□ 1.34
ABCA7-214	ENST00000531467	ERICH3	Q5RHP9	1530 aa		23.4	■■□□□ 1.34
ABCA7-214	ENST00000531467	BIVM-ERCC5	R4GMW8	1640 aa		23.4	■■□□□ 1.34
ABCA7-214	ENST00000531467	JPH4	Q96JJ6	628 aa		23.38	■■□□□ 1.33
ABCA7-214	ENST00000531467	KIF13A	Q9H1H9	1805 aa		23.38	■■□□□ 1.33

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