RNA–Protein interactions for RNA: ENST00000531368.1

UBTF-212, Transcript of upstream binding transcription factor, humanhuman

TSL 2

Gene UBTF, Length 431 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBTF-212ENST00000531368 NISCHQ9Y2I1 1504 aa29.46■■■□□ 2.31
UBTF-212ENST00000531368 CCDC180Q9P1Z9 1646 aa26.15■■□□□ 1.78
UBTF-212ENST00000531368 ABCC9O60706 1549 aa25.22■■□□□ 1.63
UBTF-212ENST00000531368 ZCCHC6Q5VYS8 1495 aaKnown RBP24.59■■□□□ 1.53
UBTF-212ENST00000531368 MYO15BQ96JP2 1530 aa24.59■■□□□ 1.53
UBTF-212ENST00000531368 NACADO15069 1562 aa24.57■■□□□ 1.52
UBTF-212ENST00000531368 DCAF1Q9Y4B6 1507 aa24.51■■□□□ 1.51
UBTF-212ENST00000531368 RB1CC1Q8TDY2 1594 aa24.5■■□□□ 1.51
UBTF-212ENST00000531368 DCAF8L2P0C7V8 631 aa24.37■■□□□ 1.49
UBTF-212ENST00000531368 UNC13AQ9UPW8 1703 aa23.8■■□□□ 1.4
UBTF-212ENST00000531368 SCRIBQ14160 1630 aa23.71■■□□□ 1.39
UBTF-212ENST00000531368 SHROOM4Q9ULL8 1493 aa23.69■■□□□ 1.38
UBTF-212ENST00000531368 BICRAQ9NZM4 1560 aa23.66■■□□□ 1.38
UBTF-212ENST00000531368 PABPN1Q86U42 306 aaKnown RBP eCLIP23.57■■□□□ 1.36
UBTF-212ENST00000531368 EIF4G1Q04637 1599 aaKnown RBP23.06■■□□□ 1.28
UBTF-212ENST00000531368 DNAJC5BQ9UF47 199 aa22.92■■□□□ 1.26
UBTF-212ENST00000531368 CC2D2AQ9P2K1 1620 aa22.87■■□□□ 1.25
UBTF-212ENST00000531368 BAZ1AQ9NRL2 1556 aaPredicted RBP22.86■■□□□ 1.25
UBTF-212ENST00000531368 CECR2Q9BXF3 1484 aa22.82■■□□□ 1.24
UBTF-212ENST00000531368 SMARCA4P51532 1647 aa22.79■■□□□ 1.24
UBTF-212ENST00000531368 SMARCA2P51531 1590 aa22.68■■□□□ 1.22
UBTF-212ENST00000531368 NCAPD3P42695 1498 aa22.66■■□□□ 1.22
UBTF-212ENST00000531368 PEG3Q9GZU2 1588 aa22.66■■□□□ 1.22
UBTF-212ENST00000531368 ATAD2BQ9ULI0 1458 aa22.64■■□□□ 1.21
UBTF-212ENST00000531368 MROH2BQ7Z745 1585 aa22.63■■□□□ 1.21
UBTF-212ENST00000531368 HMGXB3Q12766 1538 aa22.57■■□□□ 1.2
UBTF-212ENST00000531368 RSF1Q96T23 1441 aaPredicted RBP22.5■■□□□ 1.19
UBTF-212ENST00000531368 BAZ1BQ9UIG0 1483 aaKnown RBP22.46■■□□□ 1.19
UBTF-212ENST00000531368 WIZO95785 1651 aa22.36■■□□□ 1.17
UBTF-212ENST00000531368 TOP2AP11388 1531 aaKnown RBP22.25■■□□□ 1.15
UBTF-212ENST00000531368 LAMC3Q9Y6N6 1575 aa22.02■■□□□ 1.12
UBTF-212ENST00000531368 CADPSQ9ULU8 1353 aa21.99■■□□□ 1.11
UBTF-212ENST00000531368 SUPT5HO00267 1087 aaKnown RBP21.96■■□□□ 1.11
UBTF-212ENST00000531368 CCDC88BA6NC98 1476 aa21.94■■□□□ 1.1
UBTF-212ENST00000531368 CFTRP13569 1480 aa21.9■■□□□ 1.1
UBTF-212ENST00000531368 PDS5BQ9NTI5 1447 aa21.89■■□□□ 1.09
UBTF-212ENST00000531368 NESP48681 1621 aa21.86■■□□□ 1.09
UBTF-212ENST00000531368 ERCC6Q03468 1493 aa21.8■■□□□ 1.08
UBTF-212ENST00000531368 PRDM2Q13029 1718 aa21.71■■□□□ 1.07
UBTF-212ENST00000531368 FANCD2Q9BXW9 1451 aa21.69■■□□□ 1.06
UBTF-212ENST00000531368 CEP164Q9UPV0 1460 aa21.65■■□□□ 1.06
UBTF-212ENST00000531368 KIF21AQ7Z4S6 1674 aa21.63■■□□□ 1.05
UBTF-212ENST00000531368 CUX2O14529 1486 aa21.59■■□□□ 1.05
UBTF-212ENST00000531368 MRC2Q9UBG0 1479 aa21.58■■□□□ 1.05
UBTF-212ENST00000531368 THOC2Q8NI27 1593 aaKnown RBP21.57■■□□□ 1.04
UBTF-212ENST00000531368 WDR62O43379 1518 aa21.51■■□□□ 1.03
UBTF-212ENST00000531368 ABCC8Q09428 1581 aa21.51■■□□□ 1.03
UBTF-212ENST00000531368 URB2Q14146 1524 aaKnown RBP21.41■■□□□ 1.02
UBTF-212ENST00000531368 DNMBPQ6XZF7 1577 aa21.37■■□□□ 1.01
UBTF-212ENST00000531368 TOPBP1Q92547 1522 aa21.35■■□□□ 1.01
UBTF-212ENST00000531368 CUX1P39880 1505 aa21.24■□□□□ 0.99
UBTF-212ENST00000531368 WRNQ14191 1432 aaPredicted RBP eCLIP21.23■□□□□ 0.99
UBTF-212ENST00000531368 IFT140Q96RY7 1462 aa21.23■□□□□ 0.99
UBTF-212ENST00000531368 POLA1P09884 1462 aaPredicted RBP21.19■□□□□ 0.98
UBTF-212ENST00000531368 TOP2BQ02880 1626 aa21.16■□□□□ 0.98
UBTF-212ENST00000531368 BIVM-ERCC5R4GMW8 1640 aa21.15■□□□□ 0.98
UBTF-212ENST00000531368 FGD5Q6ZNL6 1462 aa21.14■□□□□ 0.98
UBTF-212ENST00000531368 SOGA1O94964 1423 aa21.12■□□□□ 0.97
UBTF-212ENST00000531368 WDR97A6NE52 1622 aa21.11■□□□□ 0.97
UBTF-212ENST00000531368 TARBP1Q13395 1621 aaKnown RBP21.09■□□□□ 0.97
UBTF-212ENST00000531368 SYNJ1O43426 1573 aa21.07■□□□□ 0.96
UBTF-212ENST00000531368 ABCA10Q8WWZ4 1543 aa21.03■□□□□ 0.96
UBTF-212ENST00000531368 RAD54L2Q9Y4B4 1467 aa21.01■□□□□ 0.95
UBTF-212ENST00000531368 ZNF608Q9ULD9 1512 aaPredicted RBP20.99■□□□□ 0.95
UBTF-212ENST00000531368 EIF4G3O43432 1585 aaKnown RBP20.94■□□□□ 0.94
UBTF-212ENST00000531368 AQRO60306 1485 aaKnown RBP eCLIP20.91■□□□□ 0.948e-7■■□□□ 14.4
UBTF-212ENST00000531368 TDRD9Q8NDG6 1382 aaKnown RBP20.91■□□□□ 0.94
UBTF-212ENST00000531368 GRIN2BQ13224 1484 aa20.88■□□□□ 0.93
UBTF-212ENST00000531368 GAPVD1Q14C86 1478 aa20.88■□□□□ 0.93
UBTF-212ENST00000531368 ABCA5Q8WWZ7 1642 aa20.87■□□□□ 0.93
UBTF-212ENST00000531368 MAGI1Q96QZ7 1491 aaPredicted RBP20.84■□□□□ 0.93
UBTF-212ENST00000531368 TRIM41Q8WV44 630 aa20.84■□□□□ 0.93
UBTF-212ENST00000531368 KIF27Q86VH2 1401 aa20.81■□□□□ 0.92
UBTF-212ENST00000531368 ERICH3Q5RHP9 1530 aa20.8■□□□□ 0.92
UBTF-212ENST00000531368 PBRM1Q86U86 1689 aa20.75■□□□□ 0.91
UBTF-212ENST00000531368 SNAPC4Q5SXM2 1469 aa20.75■□□□□ 0.91
UBTF-212ENST00000531368 SYNJ2O15056 1496 aa20.72■□□□□ 0.91
UBTF-212ENST00000531368 OSCARQ8IYS5 282 aa20.7■□□□□ 0.9
UBTF-212ENST00000531368 FHAD1B1AJZ9 1412 aa20.69■□□□□ 0.9
UBTF-212ENST00000531368 CHIC1Q5VXU3 224 aa20.68■□□□□ 0.9
UBTF-212ENST00000531368 CHMP7Q8WUX9 453 aaPredicted RBP20.67■□□□□ 0.9
UBTF-212ENST00000531368 IGF1RP08069 1367 aa20.67■□□□□ 0.9
UBTF-212ENST00000531368 ADAMTS12P58397 1594 aa20.64■□□□□ 0.9
UBTF-212ENST00000531368 DNAJC5Q9H3Z4 198 aa20.64■□□□□ 0.89
UBTF-212ENST00000531368 EEA1Q15075 1411 aa20.63■□□□□ 0.89
UBTF-212ENST00000531368 CUL7Q14999 1698 aa20.63■□□□□ 0.89
UBTF-212ENST00000531368 FBLN2P98095 1184 aa20.6■□□□□ 0.89
UBTF-212ENST00000531368 CHD1O14646 1710 aa20.6■□□□□ 0.89
UBTF-212ENST00000531368 GRIN2AQ12879 1464 aa20.58■□□□□ 0.89
UBTF-212ENST00000531368 CARMIL1Q5VZK9 1371 aa20.55■□□□□ 0.88
UBTF-212ENST00000531368 NUP160Q12769 1436 aa20.52■□□□□ 0.87
UBTF-212ENST00000531368 RUSC2Q8N2Y8 1516 aa20.5■□□□□ 0.87
UBTF-212ENST00000531368 RAPGEF2Q9Y4G8 1499 aa20.47■□□□□ 0.87
UBTF-212ENST00000531368 CLASP1Q7Z460 1538 aa20.47■□□□□ 0.87
UBTF-212ENST00000531368 CSRNP3Q8WYN3 585 aa20.46■□□□□ 0.87
UBTF-212ENST00000531368 PRXQ9BXM0 1461 aa20.44■□□□□ 0.86
UBTF-212ENST00000531368 CEP170Q5SW79 1584 aa20.41■□□□□ 0.86
UBTF-212ENST00000531368 KIAA0586Q9BVV6 1533 aa20.38■□□□□ 0.85
UBTF-212ENST00000531368 SHROOM2Q13796 1616 aa20.31■□□□□ 0.84
UBTF-212ENST00000531368 ARHGEF11O15085 1522 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms