RNA–Protein interactions for RNA: ENST00000531250.1

NDUFV1-220, Transcript of NADH:ubiquinone oxidoreductase core subunit V1, humanhuman

TSL 2

Gene NDUFV1, Length 736 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFV1-220ENST00000531250 NISCHQ9Y2I1 1504 aa45.02■■■■■ 4.8
NDUFV1-220ENST00000531250 ABCC9O60706 1549 aa40.57■■■■■ 4.08
NDUFV1-220ENST00000531250 CCDC180Q9P1Z9 1646 aa40.49■■■■■ 4.07
NDUFV1-220ENST00000531250 RB1CC1Q8TDY2 1594 aa38.57■■■■□ 3.76
NDUFV1-220ENST00000531250 NACADO15069 1562 aa38.27■■■■□ 3.72
NDUFV1-220ENST00000531250 DNAJC5BQ9UF47 199 aa38.12■■■■□ 3.69
NDUFV1-220ENST00000531250 DCAF8L2P0C7V8 631 aa37.91■■■■□ 3.66
NDUFV1-220ENST00000531250 MYO15BQ96JP2 1530 aa37.73■■■■□ 3.63
NDUFV1-220ENST00000531250 UNC13AQ9UPW8 1703 aa37.73■■■■□ 3.63
NDUFV1-220ENST00000531250 PABPN1Q86U42 306 aaKnown RBP eCLIP37.69■■■■□ 3.627e-7■■■■□ 19.6
NDUFV1-220ENST00000531250 BICRAQ9NZM4 1560 aa37.48■■■■□ 3.59
NDUFV1-220ENST00000531250 ZCCHC6Q5VYS8 1495 aaKnown RBP37.33■■■■□ 3.57
NDUFV1-220ENST00000531250 DCAF1Q9Y4B6 1507 aa37.2■■■■□ 3.55
NDUFV1-220ENST00000531250 SHROOM4Q9ULL8 1493 aa36.98■■■■□ 3.51
NDUFV1-220ENST00000531250 SCRIBQ14160 1630 aa36.88■■■■□ 3.49
NDUFV1-220ENST00000531250 CC2D2AQ9P2K1 1620 aa36.65■■■■□ 3.46
NDUFV1-220ENST00000531250 EIF4G1Q04637 1599 aaKnown RBP36.56■■■■□ 3.44
NDUFV1-220ENST00000531250 CECR2Q9BXF3 1484 aa36.56■■■■□ 3.44
NDUFV1-220ENST00000531250 NCAPD3P42695 1498 aa35.32■■■■□ 3.24
NDUFV1-220ENST00000531250 ATAD2BQ9ULI0 1458 aa35.21■■■■□ 3.23
NDUFV1-220ENST00000531250 SMARCA4P51532 1647 aa35.17■■■■□ 3.22
NDUFV1-220ENST00000531250 SMARCA2P51531 1590 aa35.12■■■■□ 3.21
NDUFV1-220ENST00000531250 HMGXB3Q12766 1538 aa35.1■■■■□ 3.21
NDUFV1-220ENST00000531250 DNAJC5Q9H3Z4 198 aa35.07■■■■□ 3.2
NDUFV1-220ENST00000531250 CUX2O14529 1486 aa35.03■■■■□ 3.2
NDUFV1-220ENST00000531250 ERCC6Q03468 1493 aa35.02■■■■□ 3.2
NDUFV1-220ENST00000531250 BAZ1AQ9NRL2 1556 aaPredicted RBP34.96■■■■□ 3.19
NDUFV1-220ENST00000531250 BAZ1BQ9UIG0 1483 aaKnown RBP34.86■■■■□ 3.17
NDUFV1-220ENST00000531250 PEG3Q9GZU2 1588 aa34.84■■■■□ 3.17
NDUFV1-220ENST00000531250 NESP48681 1621 aa34.82■■■■□ 3.16
NDUFV1-220ENST00000531250 MROH2BQ7Z745 1585 aa34.7■■■■□ 3.14
NDUFV1-220ENST00000531250 LAMC3Q9Y6N6 1575 aa34.57■■■■□ 3.12
NDUFV1-220ENST00000531250 THOC2Q8NI27 1593 aaKnown RBP34.54■■■■□ 3.12
NDUFV1-220ENST00000531250 KIF21AQ7Z4S6 1674 aa34.39■■■■□ 3.1
NDUFV1-220ENST00000531250 PDS5BQ9NTI5 1447 aa34.33■■■■□ 3.09
NDUFV1-220ENST00000531250 WIZO95785 1651 aa34.27■■■■□ 3.08
NDUFV1-220ENST00000531250 CADPSQ9ULU8 1353 aa34.23■■■■□ 3.07
NDUFV1-220ENST00000531250 MRC2Q9UBG0 1479 aa34.08■■■■□ 3.05
NDUFV1-220ENST00000531250 WDR62O43379 1518 aa34.04■■■■□ 3.04
NDUFV1-220ENST00000531250 CEP164Q9UPV0 1460 aa33.92■■■■□ 3.02
NDUFV1-220ENST00000531250 RSF1Q96T23 1441 aaPredicted RBP33.91■■■■□ 3.02
NDUFV1-220ENST00000531250 FANCD2Q9BXW9 1451 aa33.87■■■■□ 3.01
NDUFV1-220ENST00000531250 TOP2AP11388 1531 aaKnown RBP33.85■■■■□ 3.01
NDUFV1-220ENST00000531250 CFTRP13569 1480 aa33.84■■■■□ 3.01
NDUFV1-220ENST00000531250 URB2Q14146 1524 aaKnown RBP33.62■■■□□ 2.97
NDUFV1-220ENST00000531250 PRDM2Q13029 1718 aa33.53■■■□□ 2.96
NDUFV1-220ENST00000531250 TRIM41Q8WV44 630 aa33.47■■■□□ 2.95
NDUFV1-220ENST00000531250 CCDC88BA6NC98 1476 aa33.43■■■□□ 2.94
NDUFV1-220ENST00000531250 OSCARQ8IYS5 282 aa33.31■■■□□ 2.92
NDUFV1-220ENST00000531250 IFT140Q96RY7 1462 aa33.25■■■□□ 2.91
NDUFV1-220ENST00000531250 TOPBP1Q92547 1522 aa33.23■■■□□ 2.91
NDUFV1-220ENST00000531250 ZNF608Q9ULD9 1512 aaPredicted RBP33.21■■■□□ 2.91
NDUFV1-220ENST00000531250 ABCC8Q09428 1581 aa33.1■■■□□ 2.89
NDUFV1-220ENST00000531250 DNMBPQ6XZF7 1577 aa33.1■■■□□ 2.89
NDUFV1-220ENST00000531250 EIF4G3O43432 1585 aaKnown RBP33.05■■■□□ 2.88
NDUFV1-220ENST00000531250 RIMBP3CA6NJZ7 1639 aa32.99■■■□□ 2.87
NDUFV1-220ENST00000531250 RIMBP3BA6NNM3 1639 aa32.99■■■□□ 2.87
NDUFV1-220ENST00000531250 RIMBP3Q9UFD9 1639 aa32.99■■■□□ 2.87
NDUFV1-220ENST00000531250 TARBP1Q13395 1621 aaKnown RBP32.95■■■□□ 2.87
NDUFV1-220ENST00000531250 POLA1P09884 1462 aaPredicted RBP32.88■■■□□ 2.85
NDUFV1-220ENST00000531250 ARHGEF11O15085 1522 aa32.87■■■□□ 2.85
NDUFV1-220ENST00000531250 AQRO60306 1485 aaKnown RBP eCLIP32.86■■■□□ 2.856e-14■■■■■ 34
NDUFV1-220ENST00000531250 CHD1O14646 1710 aa32.81■■■□□ 2.84
NDUFV1-220ENST00000531250 RAD54L2Q9Y4B4 1467 aa32.74■■■□□ 2.83
NDUFV1-220ENST00000531250 SOGA1O94964 1423 aa32.68■■■□□ 2.82
NDUFV1-220ENST00000531250 FGD5Q6ZNL6 1462 aa32.66■■■□□ 2.82
NDUFV1-220ENST00000531250 TDRD9Q8NDG6 1382 aaKnown RBP32.63■■■□□ 2.81
NDUFV1-220ENST00000531250 WDR97A6NE52 1622 aa32.62■■■□□ 2.81
NDUFV1-220ENST00000531250 CUX1P39880 1505 aa32.61■■■□□ 2.81
NDUFV1-220ENST00000531250 FBLN2P98095 1184 aa32.6■■■□□ 2.81
NDUFV1-220ENST00000531250 SNAPC4Q5SXM2 1469 aa32.56■■■□□ 2.8
NDUFV1-220ENST00000531250 ARAP1Q96P48 1450 aa32.56■■■□□ 2.8
NDUFV1-220ENST00000531250 CYB5RLQ6IPT4 315 aa32.54■■■□□ 2.8
NDUFV1-220ENST00000531250 MAGI1Q96QZ7 1491 aaPredicted RBP32.48■■■□□ 2.79
NDUFV1-220ENST00000531250 CLASP1Q7Z460 1538 aa32.45■■■□□ 2.78
NDUFV1-220ENST00000531250 GRIN2BQ13224 1484 aa32.44■■■□□ 2.78
NDUFV1-220ENST00000531250 SYNJ1O43426 1573 aa32.39■■■□□ 2.78
NDUFV1-220ENST00000531250 CHMP7Q8WUX9 453 aaPredicted RBP32.36■■■□□ 2.77
NDUFV1-220ENST00000531250 SYNJ2O15056 1496 aa32.35■■■□□ 2.77
NDUFV1-220ENST00000531250 PBRM1Q86U86 1689 aa32.34■■■□□ 2.77
NDUFV1-220ENST00000531250 GAPVD1Q14C86 1478 aa32.3■■■□□ 2.76
NDUFV1-220ENST00000531250 ABCA10Q8WWZ4 1543 aa32.28■■■□□ 2.76
NDUFV1-220ENST00000531250 ABCA5Q8WWZ7 1642 aa32.28■■■□□ 2.76
NDUFV1-220ENST00000531250 SUPT5HO00267 1087 aaKnown RBP32.23■■■□□ 2.75
NDUFV1-220ENST00000531250 TRHP20396 242 aaPredicted RBP32.21■■■□□ 2.75
NDUFV1-220ENST00000531250 WRNQ14191 1432 aaPredicted RBP eCLIP32.09■■■□□ 2.73
NDUFV1-220ENST00000531250 BIVM-ERCC5R4GMW8 1640 aa32.08■■■□□ 2.73
NDUFV1-220ENST00000531250 TOP2BQ02880 1626 aa32.05■■■□□ 2.72
NDUFV1-220ENST00000531250 ADAMTS12P58397 1594 aa32.04■■■□□ 2.72
NDUFV1-220ENST00000531250 GRIN2AQ12879 1464 aa32.03■■■□□ 2.72
NDUFV1-220ENST00000531250 CEP170Q5SW79 1584 aa31.95■■■□□ 2.71
NDUFV1-220ENST00000531250 NUP160Q12769 1436 aa31.94■■■□□ 2.7
NDUFV1-220ENST00000531250 ERCC6L2Q5T890 1561 aa31.93■■■□□ 2.7
NDUFV1-220ENST00000531250 FHAD1B1AJZ9 1412 aa31.9■■■□□ 2.7
NDUFV1-220ENST00000531250 ERICH3Q5RHP9 1530 aa31.86■■■□□ 2.69
NDUFV1-220ENST00000531250 SHROOM2Q13796 1616 aa31.83■■■□□ 2.69
NDUFV1-220ENST00000531250 RUSC2Q8N2Y8 1516 aa31.6■■■□□ 2.65
NDUFV1-220ENST00000531250 PRG4Q92954 1404 aaPredicted RBP31.6■■■□□ 2.65
NDUFV1-220ENST00000531250 JPH4Q96JJ6 628 aa31.52■■■□□ 2.64
NDUFV1-220ENST00000531250 KIF13AQ9H1H9 1805 aa31.45■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 271.7 ms