RNA–Protein interactions for RNA: ENST00000531229.1

SUMF2-219, Transcript of sulfatase modifying factor 2, humanhuman

TSL 2

Gene SUMF2, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMF2-219ENST00000531229 NISCHQ9Y2I1 1504 aa34.53■■■■□ 3.12
SUMF2-219ENST00000531229 CCDC180Q9P1Z9 1646 aa31.09■■■□□ 2.57
SUMF2-219ENST00000531229 ABCC9O60706 1549 aa30.98■■■□□ 2.55
SUMF2-219ENST00000531229 RB1CC1Q8TDY2 1594 aa29.57■■■□□ 2.32
SUMF2-219ENST00000531229 NACADO15069 1562 aa29.36■■■□□ 2.29
SUMF2-219ENST00000531229 DCAF8L2P0C7V8 631 aa29.16■■■□□ 2.26
SUMF2-219ENST00000531229 DNAJC5BQ9UF47 199 aa28.96■■■□□ 2.23
SUMF2-219ENST00000531229 MYO15BQ96JP2 1530 aa28.94■■■□□ 2.22
SUMF2-219ENST00000531229 UNC13AQ9UPW8 1703 aa28.88■■■□□ 2.21
SUMF2-219ENST00000531229 PABPN1Q86U42 306 aaKnown RBP eCLIP28.8■■■□□ 2.2
SUMF2-219ENST00000531229 BICRAQ9NZM4 1560 aa28.62■■■□□ 2.17
SUMF2-219ENST00000531229 ZCCHC6Q5VYS8 1495 aaKnown RBP28.61■■■□□ 2.17
SUMF2-219ENST00000531229 DCAF1Q9Y4B6 1507 aa28.56■■■□□ 2.16
SUMF2-219ENST00000531229 SHROOM4Q9ULL8 1493 aa28.35■■■□□ 2.13
SUMF2-219ENST00000531229 SCRIBQ14160 1630 aa28.25■■■□□ 2.11
SUMF2-219ENST00000531229 CC2D2AQ9P2K1 1620 aa28.02■■■□□ 2.08
SUMF2-219ENST00000531229 EIF4G1Q04637 1599 aaKnown RBP27.95■■■□□ 2.07
SUMF2-219ENST00000531229 CECR2Q9BXF3 1484 aa27.94■■■□□ 2.06
SUMF2-219ENST00000531229 NCAPD3P42695 1498 aa27.05■■□□□ 1.92
SUMF2-219ENST00000531229 SMARCA4P51532 1647 aa26.97■■□□□ 1.91
SUMF2-219ENST00000531229 SMARCA2P51531 1590 aa26.96■■□□□ 1.91
SUMF2-219ENST00000531229 ATAD2BQ9ULI0 1458 aa26.95■■□□□ 1.91
SUMF2-219ENST00000531229 HMGXB3Q12766 1538 aa26.89■■□□□ 1.89
SUMF2-219ENST00000531229 BAZ1AQ9NRL2 1556 aaPredicted RBP26.85■■□□□ 1.89
SUMF2-219ENST00000531229 ERCC6Q03468 1493 aa26.82■■□□□ 1.88
SUMF2-219ENST00000531229 CUX2O14529 1486 aa26.77■■□□□ 1.88
SUMF2-219ENST00000531229 BAZ1BQ9UIG0 1483 aaKnown RBP26.74■■□□□ 1.87
SUMF2-219ENST00000531229 DNAJC5Q9H3Z4 198 aa26.7■■□□□ 1.86
SUMF2-219ENST00000531229 PEG3Q9GZU2 1588 aa26.7■■□□□ 1.86
SUMF2-219ENST00000531229 NESP48681 1621 aa26.58■■□□□ 1.85
SUMF2-219ENST00000531229 MROH2BQ7Z745 1585 aa26.57■■□□□ 1.84
SUMF2-219ENST00000531229 LAMC3Q9Y6N6 1575 aa26.5■■□□□ 1.83
SUMF2-219ENST00000531229 THOC2Q8NI27 1593 aaKnown RBP26.37■■□□□ 1.81
SUMF2-219ENST00000531229 PDS5BQ9NTI5 1447 aa26.34■■□□□ 1.81
SUMF2-219ENST00000531229 KIF21AQ7Z4S6 1674 aa26.32■■□□□ 1.8
SUMF2-219ENST00000531229 WIZO95785 1651 aa26.28■■□□□ 1.8
SUMF2-219ENST00000531229 CADPSQ9ULU8 1353 aa26.23■■□□□ 1.79
SUMF2-219ENST00000531229 MRC2Q9UBG0 1479 aa26.09■■□□□ 1.77
SUMF2-219ENST00000531229 WDR62O43379 1518 aa26.02■■□□□ 1.76
SUMF2-219ENST00000531229 RSF1Q96T23 1441 aaPredicted RBP26.01■■□□□ 1.75
SUMF2-219ENST00000531229 CEP164Q9UPV0 1460 aa26■■□□□ 1.75
SUMF2-219ENST00000531229 TOP2AP11388 1531 aaKnown RBP25.98■■□□□ 1.75
SUMF2-219ENST00000531229 FANCD2Q9BXW9 1451 aa25.94■■□□□ 1.74
SUMF2-219ENST00000531229 CFTRP13569 1480 aa25.92■■□□□ 1.74
SUMF2-219ENST00000531229 PRDM2Q13029 1718 aa25.79■■□□□ 1.72
SUMF2-219ENST00000531229 URB2Q14146 1524 aaKnown RBP25.69■■□□□ 1.7
SUMF2-219ENST00000531229 CCDC88BA6NC98 1476 aa25.64■■□□□ 1.69
SUMF2-219ENST00000531229 TRIM41Q8WV44 630 aa25.54■■□□□ 1.68
SUMF2-219ENST00000531229 OSCARQ8IYS5 282 aa25.53■■□□□ 1.68
SUMF2-219ENST00000531229 IFT140Q96RY7 1462 aa25.47■■□□□ 1.67
SUMF2-219ENST00000531229 ABCC8Q09428 1581 aa25.47■■□□□ 1.67
SUMF2-219ENST00000531229 TOPBP1Q92547 1522 aa25.44■■□□□ 1.66
SUMF2-219ENST00000531229 DNMBPQ6XZF7 1577 aa25.39■■□□□ 1.65
SUMF2-219ENST00000531229 ZNF608Q9ULD9 1512 aaPredicted RBP25.36■■□□□ 1.65
SUMF2-219ENST00000531229 EIF4G3O43432 1585 aaKnown RBP25.29■■□□□ 1.64
SUMF2-219ENST00000531229 TARBP1Q13395 1621 aaKnown RBP25.22■■□□□ 1.63
SUMF2-219ENST00000531229 RIMBP3CA6NJZ7 1639 aa25.19■■□□□ 1.62
SUMF2-219ENST00000531229 RIMBP3BA6NNM3 1639 aa25.19■■□□□ 1.62
SUMF2-219ENST00000531229 RIMBP3Q9UFD9 1639 aa25.19■■□□□ 1.62
SUMF2-219ENST00000531229 POLA1P09884 1462 aaPredicted RBP25.17■■□□□ 1.62
SUMF2-219ENST00000531229 AQRO60306 1485 aaKnown RBP eCLIP25.14■■□□□ 1.611e-13■■■■■ 64.3
SUMF2-219ENST00000531229 CHD1O14646 1710 aa25.13■■□□□ 1.61
SUMF2-219ENST00000531229 ARHGEF11O15085 1522 aa25.1■■□□□ 1.61
SUMF2-219ENST00000531229 SOGA1O94964 1423 aa25.07■■□□□ 1.6
SUMF2-219ENST00000531229 WDR97A6NE52 1622 aa25.05■■□□□ 1.6
SUMF2-219ENST00000531229 RAD54L2Q9Y4B4 1467 aa25.05■■□□□ 1.6
SUMF2-219ENST00000531229 FBLN2P98095 1184 aa25.03■■□□□ 1.6
SUMF2-219ENST00000531229 FGD5Q6ZNL6 1462 aa25.02■■□□□ 1.6
SUMF2-219ENST00000531229 TDRD9Q8NDG6 1382 aaKnown RBP24.99■■□□□ 1.59
SUMF2-219ENST00000531229 CUX1P39880 1505 aa24.97■■□□□ 1.59
SUMF2-219ENST00000531229 SNAPC4Q5SXM2 1469 aa24.92■■□□□ 1.58
SUMF2-219ENST00000531229 CYB5RLQ6IPT4 315 aa24.9■■□□□ 1.58
SUMF2-219ENST00000531229 MAGI1Q96QZ7 1491 aaPredicted RBP24.89■■□□□ 1.58
SUMF2-219ENST00000531229 SUPT5HO00267 1087 aaKnown RBP24.88■■□□□ 1.57
SUMF2-219ENST00000531229 GRIN2BQ13224 1484 aa24.88■■□□□ 1.57
SUMF2-219ENST00000531229 CHMP7Q8WUX9 453 aaPredicted RBP24.86■■□□□ 1.57
SUMF2-219ENST00000531229 SYNJ1O43426 1573 aa24.85■■□□□ 1.57
SUMF2-219ENST00000531229 PBRM1Q86U86 1689 aa24.82■■□□□ 1.56
SUMF2-219ENST00000531229 ARAP1Q96P48 1450 aa24.82■■□□□ 1.56
SUMF2-219ENST00000531229 SYNJ2O15056 1496 aa24.8■■□□□ 1.56
SUMF2-219ENST00000531229 CLASP1Q7Z460 1538 aa24.79■■□□□ 1.56
SUMF2-219ENST00000531229 GAPVD1Q14C86 1478 aa24.78■■□□□ 1.56
SUMF2-219ENST00000531229 ABCA10Q8WWZ4 1543 aa24.75■■□□□ 1.55
SUMF2-219ENST00000531229 ABCA5Q8WWZ7 1642 aa24.72■■□□□ 1.55
SUMF2-219ENST00000531229 TRHP20396 242 aaPredicted RBP24.67■■□□□ 1.54
SUMF2-219ENST00000531229 WRNQ14191 1432 aaPredicted RBP eCLIP24.67■■□□□ 1.54
SUMF2-219ENST00000531229 BIVM-ERCC5R4GMW8 1640 aa24.64■■□□□ 1.54
SUMF2-219ENST00000531229 TOP2BQ02880 1626 aa24.62■■□□□ 1.53
SUMF2-219ENST00000531229 GRIN2AQ12879 1464 aa24.55■■□□□ 1.52
SUMF2-219ENST00000531229 ADAMTS12P58397 1594 aa24.54■■□□□ 1.52
SUMF2-219ENST00000531229 ERICH3Q5RHP9 1530 aa24.47■■□□□ 1.51
SUMF2-219ENST00000531229 FHAD1B1AJZ9 1412 aa24.47■■□□□ 1.51
SUMF2-219ENST00000531229 NUP160Q12769 1436 aa24.44■■□□□ 1.5
SUMF2-219ENST00000531229 CEP170Q5SW79 1584 aa24.43■■□□□ 1.5
SUMF2-219ENST00000531229 SHROOM2Q13796 1616 aa24.37■■□□□ 1.49
SUMF2-219ENST00000531229 ERCC6L2Q5T890 1561 aa24.35■■□□□ 1.49
SUMF2-219ENST00000531229 PRG4Q92954 1404 aaPredicted RBP24.22■■□□□ 1.47
SUMF2-219ENST00000531229 JPH4Q96JJ6 628 aa24.2■■□□□ 1.46
SUMF2-219ENST00000531229 RUSC2Q8N2Y8 1516 aa24.2■■□□□ 1.46
SUMF2-219ENST00000531229 KIF27Q86VH2 1401 aa24.17■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms