RNA–Protein interactions for RNA: ENST00000531186.5

EIF3M-209, Transcript of eukaryotic translation initiation factor 3 subunit M, humanhuman

TSL 2

Gene EIF3M, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3M-209ENST00000531186 NISCHQ9Y2I1 1504 aa34.23■■■■□ 3.07
EIF3M-209ENST00000531186 ABCC9O60706 1549 aa30.68■■■□□ 2.5
EIF3M-209ENST00000531186 CCDC180Q9P1Z9 1646 aa30.62■■■□□ 2.49
EIF3M-209ENST00000531186 RB1CC1Q8TDY2 1594 aa29.17■■■□□ 2.26
EIF3M-209ENST00000531186 DCAF8L2P0C7V8 631 aa28.98■■■□□ 2.23
EIF3M-209ENST00000531186 NACADO15069 1562 aa28.96■■■□□ 2.23
EIF3M-209ENST00000531186 DNAJC5BQ9UF47 199 aa28.72■■■□□ 2.19
EIF3M-209ENST00000531186 PABPN1Q86U42 306 aaKnown RBP eCLIP28.61■■■□□ 2.17
EIF3M-209ENST00000531186 MYO15BQ96JP2 1530 aa28.55■■■□□ 2.16
EIF3M-209ENST00000531186 UNC13AQ9UPW8 1703 aa28.45■■■□□ 2.14
EIF3M-209ENST00000531186 ZCCHC6Q5VYS8 1495 aaKnown RBP28.38■■■□□ 2.13
EIF3M-209ENST00000531186 BICRAQ9NZM4 1560 aa28.31■■■□□ 2.12
EIF3M-209ENST00000531186 DCAF1Q9Y4B6 1507 aa28.23■■■□□ 2.11
EIF3M-209ENST00000531186 SCRIBQ14160 1630 aa28■■■□□ 2.07
EIF3M-209ENST00000531186 SHROOM4Q9ULL8 1493 aa27.89■■■□□ 2.06
EIF3M-209ENST00000531186 CC2D2AQ9P2K1 1620 aa27.67■■■□□ 2.02
EIF3M-209ENST00000531186 EIF4G1Q04637 1599 aaKnown RBP27.62■■■□□ 2.01
EIF3M-209ENST00000531186 CECR2Q9BXF3 1484 aa27.61■■■□□ 2.01
EIF3M-209ENST00000531186 NCAPD3P42695 1498 aa26.75■■□□□ 1.87
EIF3M-209ENST00000531186 ATAD2BQ9ULI0 1458 aa26.71■■□□□ 1.87
EIF3M-209ENST00000531186 SMARCA4P51532 1647 aa26.68■■□□□ 1.86
EIF3M-209ENST00000531186 SMARCA2P51531 1590 aa26.62■■□□□ 1.85
EIF3M-209ENST00000531186 BAZ1AQ9NRL2 1556 aaPredicted RBP26.56■■□□□ 1.84
EIF3M-209ENST00000531186 HMGXB3Q12766 1538 aa26.55■■□□□ 1.84
EIF3M-209ENST00000531186 ERCC6Q03468 1493 aa26.49■■□□□ 1.83
EIF3M-209ENST00000531186 BAZ1BQ9UIG0 1483 aaKnown RBP26.47■■□□□ 1.83
EIF3M-209ENST00000531186 MROH2BQ7Z745 1585 aa26.4■■□□□ 1.82
EIF3M-209ENST00000531186 PEG3Q9GZU2 1588 aa26.37■■□□□ 1.81
EIF3M-209ENST00000531186 NESP48681 1621 aa26.36■■□□□ 1.81
EIF3M-209ENST00000531186 CUX2O14529 1486 aa26.36■■□□□ 1.81
EIF3M-209ENST00000531186 DNAJC5Q9H3Z4 198 aa26.29■■□□□ 1.8
EIF3M-209ENST00000531186 LAMC3Q9Y6N6 1575 aa26.12■■□□□ 1.77
EIF3M-209ENST00000531186 WIZO95785 1651 aa26.07■■□□□ 1.76
EIF3M-209ENST00000531186 THOC2Q8NI27 1593 aaKnown RBP26.03■■□□□ 1.76
EIF3M-209ENST00000531186 PDS5BQ9NTI5 1447 aa26.02■■□□□ 1.76
EIF3M-209ENST00000531186 CADPSQ9ULU8 1353 aa25.97■■□□□ 1.75
EIF3M-209ENST00000531186 KIF21AQ7Z4S6 1674 aa25.97■■□□□ 1.75
EIF3M-209ENST00000531186 RSF1Q96T23 1441 aaPredicted RBP25.88■■□□□ 1.73
EIF3M-209ENST00000531186 MRC2Q9UBG0 1479 aa25.79■■□□□ 1.72
EIF3M-209ENST00000531186 TOP2AP11388 1531 aaKnown RBP25.74■■□□□ 1.71
EIF3M-209ENST00000531186 CEP164Q9UPV0 1460 aa25.71■■□□□ 1.71
EIF3M-209ENST00000531186 WDR62O43379 1518 aa25.69■■□□□ 1.7
EIF3M-209ENST00000531186 FANCD2Q9BXW9 1451 aa25.69■■□□□ 1.7
EIF3M-209ENST00000531186 CFTRP13569 1480 aa25.67■■□□□ 1.7
EIF3M-209ENST00000531186 CCDC88BA6NC98 1476 aa25.47■■□□□ 1.67
EIF3M-209ENST00000531186 URB2Q14146 1524 aaKnown RBP25.47■■□□□ 1.67
EIF3M-209ENST00000531186 PRDM2Q13029 1718 aa25.34■■□□□ 1.65
EIF3M-209ENST00000531186 TRIM41Q8WV44 630 aa25.26■■□□□ 1.63
EIF3M-209ENST00000531186 OSCARQ8IYS5 282 aa25.21■■□□□ 1.63
EIF3M-209ENST00000531186 TOPBP1Q92547 1522 aa25.2■■□□□ 1.62
EIF3M-209ENST00000531186 IFT140Q96RY7 1462 aa25.18■■□□□ 1.62
EIF3M-209ENST00000531186 ZNF608Q9ULD9 1512 aaPredicted RBP25.17■■□□□ 1.62
EIF3M-209ENST00000531186 ABCC8Q09428 1581 aa25.11■■□□□ 1.61
EIF3M-209ENST00000531186 DNMBPQ6XZF7 1577 aa25.1■■□□□ 1.61
EIF3M-209ENST00000531186 EIF4G3O43432 1585 aaKnown RBP24.99■■□□□ 1.59
EIF3M-209ENST00000531186 AQRO60306 1485 aaKnown RBP eCLIP24.95■■□□□ 1.584e-7■□□□□ 8.6
EIF3M-209ENST00000531186 POLA1P09884 1462 aaPredicted RBP24.95■■□□□ 1.58
EIF3M-209ENST00000531186 TARBP1Q13395 1621 aaKnown RBP24.94■■□□□ 1.58
EIF3M-209ENST00000531186 RAD54L2Q9Y4B4 1467 aa24.89■■□□□ 1.57
EIF3M-209ENST00000531186 SUPT5HO00267 1087 aaKnown RBP24.88■■□□□ 1.57
EIF3M-209ENST00000531186 SOGA1O94964 1423 aa24.86■■□□□ 1.57
EIF3M-209ENST00000531186 RIMBP3CA6NJZ7 1639 aa24.84■■□□□ 1.57
EIF3M-209ENST00000531186 RIMBP3BA6NNM3 1639 aa24.84■■□□□ 1.57
EIF3M-209ENST00000531186 RIMBP3Q9UFD9 1639 aa24.84■■□□□ 1.57
EIF3M-209ENST00000531186 FBLN2P98095 1184 aa24.83■■□□□ 1.57
EIF3M-209ENST00000531186 TDRD9Q8NDG6 1382 aaKnown RBP24.82■■□□□ 1.56
EIF3M-209ENST00000531186 FGD5Q6ZNL6 1462 aa24.82■■□□□ 1.56
EIF3M-209ENST00000531186 CUX1P39880 1505 aa24.8■■□□□ 1.56
EIF3M-209ENST00000531186 ARHGEF11O15085 1522 aa24.78■■□□□ 1.56
EIF3M-209ENST00000531186 CHD1O14646 1710 aa24.78■■□□□ 1.56
EIF3M-209ENST00000531186 SNAPC4Q5SXM2 1469 aa24.7■■□□□ 1.54
EIF3M-209ENST00000531186 WDR97A6NE52 1622 aa24.65■■□□□ 1.54
EIF3M-209ENST00000531186 CYB5RLQ6IPT4 315 aa24.65■■□□□ 1.54
EIF3M-209ENST00000531186 CHMP7Q8WUX9 453 aaPredicted RBP24.62■■□□□ 1.53
EIF3M-209ENST00000531186 GRIN2BQ13224 1484 aa24.62■■□□□ 1.53
EIF3M-209ENST00000531186 MAGI1Q96QZ7 1491 aaPredicted RBP24.59■■□□□ 1.53
EIF3M-209ENST00000531186 ARAP1Q96P48 1450 aa24.56■■□□□ 1.52
EIF3M-209ENST00000531186 GAPVD1Q14C86 1478 aa24.54■■□□□ 1.52
EIF3M-209ENST00000531186 SYNJ2O15056 1496 aa24.51■■□□□ 1.51
EIF3M-209ENST00000531186 ABCA10Q8WWZ4 1543 aa24.51■■□□□ 1.51
EIF3M-209ENST00000531186 SYNJ1O43426 1573 aa24.5■■□□□ 1.51
EIF3M-209ENST00000531186 CLASP1Q7Z460 1538 aa24.5■■□□□ 1.51
EIF3M-209ENST00000531186 PBRM1Q86U86 1689 aa24.48■■□□□ 1.51
EIF3M-209ENST00000531186 ABCA5Q8WWZ7 1642 aa24.45■■□□□ 1.5
EIF3M-209ENST00000531186 WRNQ14191 1432 aaPredicted RBP eCLIP24.44■■□□□ 1.5
EIF3M-209ENST00000531186 TOP2BQ02880 1626 aa24.39■■□□□ 1.49
EIF3M-209ENST00000531186 BIVM-ERCC5R4GMW8 1640 aa24.37■■□□□ 1.49
EIF3M-209ENST00000531186 TRHP20396 242 aaPredicted RBP24.37■■□□□ 1.49
EIF3M-209ENST00000531186 GRIN2AQ12879 1464 aa24.29■■□□□ 1.48
EIF3M-209ENST00000531186 ADAMTS12P58397 1594 aa24.29■■□□□ 1.48
EIF3M-209ENST00000531186 FHAD1B1AJZ9 1412 aa24.23■■□□□ 1.47
EIF3M-209ENST00000531186 CEP170Q5SW79 1584 aa24.2■■□□□ 1.47
EIF3M-209ENST00000531186 NUP160Q12769 1436 aa24.2■■□□□ 1.46
EIF3M-209ENST00000531186 ERICH3Q5RHP9 1530 aa24.2■■□□□ 1.46
EIF3M-209ENST00000531186 ERCC6L2Q5T890 1561 aa24.16■■□□□ 1.46
EIF3M-209ENST00000531186 SHROOM2Q13796 1616 aa24.05■■□□□ 1.44
EIF3M-209ENST00000531186 PRG4Q92954 1404 aaPredicted RBP24.01■■□□□ 1.43
EIF3M-209ENST00000531186 JPH4Q96JJ6 628 aa23.99■■□□□ 1.43
EIF3M-209ENST00000531186 KIF27Q86VH2 1401 aa23.95■■□□□ 1.42
EIF3M-209ENST00000531186 RUSC2Q8N2Y8 1516 aa23.94■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms