RNA–Protein interactions for RNA: ENST00000531146.1

VPS51-210, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 2

Gene VPS51, Length 594 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-210ENST00000531146 NISCHQ9Y2I1 1504 aa30.07■■■□□ 2.4
VPS51-210ENST00000531146 ABCC9O60706 1549 aa27■■□□□ 1.91
VPS51-210ENST00000531146 CCDC180Q9P1Z9 1646 aa26.95■■□□□ 1.91
VPS51-210ENST00000531146 RB1CC1Q8TDY2 1594 aa25.66■■□□□ 1.7
VPS51-210ENST00000531146 NACADO15069 1562 aa25.48■■□□□ 1.67
VPS51-210ENST00000531146 DCAF8L2P0C7V8 631 aa25.39■■□□□ 1.66
VPS51-210ENST00000531146 DNAJC5BQ9UF47 199 aa25.38■■□□□ 1.65
VPS51-210ENST00000531146 PABPN1Q86U42 306 aaKnown RBP eCLIP25.16■■□□□ 1.62
VPS51-210ENST00000531146 MYO15BQ96JP2 1530 aa25.13■■□□□ 1.61
VPS51-210ENST00000531146 UNC13AQ9UPW8 1703 aa25.12■■□□□ 1.61
VPS51-210ENST00000531146 BICRAQ9NZM4 1560 aa24.97■■□□□ 1.59
VPS51-210ENST00000531146 ZCCHC6Q5VYS8 1495 aaKnown RBP24.93■■□□□ 1.58
VPS51-210ENST00000531146 DCAF1Q9Y4B6 1507 aa24.82■■□□□ 1.56
VPS51-210ENST00000531146 SCRIBQ14160 1630 aa24.6■■□□□ 1.53
VPS51-210ENST00000531146 SHROOM4Q9ULL8 1493 aa24.56■■□□□ 1.52
VPS51-210ENST00000531146 CC2D2AQ9P2K1 1620 aa24.39■■□□□ 1.49
VPS51-210ENST00000531146 EIF4G1Q04637 1599 aaKnown RBP24.33■■□□□ 1.48
VPS51-210ENST00000531146 CECR2Q9BXF3 1484 aa24.31■■□□□ 1.48
VPS51-210ENST00000531146 NCAPD3P42695 1498 aa23.56■■□□□ 1.36
VPS51-210ENST00000531146 ATAD2BQ9ULI0 1458 aa23.49■■□□□ 1.35
VPS51-210ENST00000531146 SMARCA4P51532 1647 aa23.46■■□□□ 1.35
VPS51-210ENST00000531146 SMARCA2P51531 1590 aa23.39■■□□□ 1.33
VPS51-210ENST00000531146 HMGXB3Q12766 1538 aa23.36■■□□□ 1.33
VPS51-210ENST00000531146 BAZ1AQ9NRL2 1556 aaPredicted RBP23.32■■□□□ 1.32
VPS51-210ENST00000531146 ERCC6Q03468 1493 aa23.27■■□□□ 1.32
VPS51-210ENST00000531146 BAZ1BQ9UIG0 1483 aaKnown RBP23.24■■□□□ 1.31
VPS51-210ENST00000531146 DNAJC5Q9H3Z4 198 aa23.24■■□□□ 1.31
VPS51-210ENST00000531146 CUX2O14529 1486 aa23.23■■□□□ 1.31
VPS51-210ENST00000531146 PEG3Q9GZU2 1588 aa23.23■■□□□ 1.31
VPS51-210ENST00000531146 NESP48681 1621 aa23.22■■□□□ 1.31
VPS51-210ENST00000531146 MROH2BQ7Z745 1585 aa23.2■■□□□ 1.3
VPS51-210ENST00000531146 LAMC3Q9Y6N6 1575 aa23■■□□□ 1.27
VPS51-210ENST00000531146 THOC2Q8NI27 1593 aaKnown RBP22.96■■□□□ 1.27
VPS51-210ENST00000531146 WIZO95785 1651 aa22.92■■□□□ 1.26
VPS51-210ENST00000531146 KIF21AQ7Z4S6 1674 aa22.89■■□□□ 1.25
VPS51-210ENST00000531146 PDS5BQ9NTI5 1447 aa22.86■■□□□ 1.25
VPS51-210ENST00000531146 CADPSQ9ULU8 1353 aa22.84■■□□□ 1.25
VPS51-210ENST00000531146 RSF1Q96T23 1441 aaPredicted RBP22.72■■□□□ 1.23
VPS51-210ENST00000531146 MRC2Q9UBG0 1479 aa22.68■■□□□ 1.22
VPS51-210ENST00000531146 WDR62O43379 1518 aa22.63■■□□□ 1.21
VPS51-210ENST00000531146 TOP2AP11388 1531 aaKnown RBP22.61■■□□□ 1.21
VPS51-210ENST00000531146 CEP164Q9UPV0 1460 aa22.59■■□□□ 1.21
VPS51-210ENST00000531146 CFTRP13569 1480 aa22.58■■□□□ 1.2
VPS51-210ENST00000531146 FANCD2Q9BXW9 1451 aa22.58■■□□□ 1.2
VPS51-210ENST00000531146 URB2Q14146 1524 aaKnown RBP22.41■■□□□ 1.18
VPS51-210ENST00000531146 CCDC88BA6NC98 1476 aa22.37■■□□□ 1.17
VPS51-210ENST00000531146 PRDM2Q13029 1718 aa22.32■■□□□ 1.16
VPS51-210ENST00000531146 TRIM41Q8WV44 630 aa22.23■■□□□ 1.15
VPS51-210ENST00000531146 OSCARQ8IYS5 282 aa22.18■■□□□ 1.14
VPS51-210ENST00000531146 TOPBP1Q92547 1522 aa22.16■■□□□ 1.14
VPS51-210ENST00000531146 ZNF608Q9ULD9 1512 aaPredicted RBP22.15■■□□□ 1.14
VPS51-210ENST00000531146 IFT140Q96RY7 1462 aa22.14■■□□□ 1.13
VPS51-210ENST00000531146 ABCC8Q09428 1581 aa22.06■■□□□ 1.12
VPS51-210ENST00000531146 DNMBPQ6XZF7 1577 aa22.06■■□□□ 1.12
VPS51-210ENST00000531146 EIF4G3O43432 1585 aaKnown RBP21.99■■□□□ 1.11
VPS51-210ENST00000531146 TARBP1Q13395 1621 aaKnown RBP21.97■■□□□ 1.11
VPS51-210ENST00000531146 AQRO60306 1485 aaKnown RBP eCLIP21.94■■□□□ 1.1
VPS51-210ENST00000531146 POLA1P09884 1462 aaPredicted RBP21.94■■□□□ 1.1
VPS51-210ENST00000531146 RIMBP3CA6NJZ7 1639 aa21.91■■□□□ 1.1
VPS51-210ENST00000531146 RIMBP3BA6NNM3 1639 aa21.91■■□□□ 1.1
VPS51-210ENST00000531146 RIMBP3Q9UFD9 1639 aa21.91■■□□□ 1.1
VPS51-210ENST00000531146 RAD54L2Q9Y4B4 1467 aa21.88■■□□□ 1.09
VPS51-210ENST00000531146 ARHGEF11O15085 1522 aa21.85■■□□□ 1.09
VPS51-210ENST00000531146 CHD1O14646 1710 aa21.83■■□□□ 1.09
VPS51-210ENST00000531146 SOGA1O94964 1423 aa21.82■■□□□ 1.08
VPS51-210ENST00000531146 TDRD9Q8NDG6 1382 aaKnown RBP21.81■■□□□ 1.08
VPS51-210ENST00000531146 FGD5Q6ZNL6 1462 aa21.8■■□□□ 1.08
VPS51-210ENST00000531146 CUX1P39880 1505 aa21.8■■□□□ 1.08
VPS51-210ENST00000531146 FBLN2P98095 1184 aa21.77■■□□□ 1.08
VPS51-210ENST00000531146 SUPT5HO00267 1087 aaKnown RBP21.71■■□□□ 1.07
VPS51-210ENST00000531146 SNAPC4Q5SXM2 1469 aa21.7■■□□□ 1.06
VPS51-210ENST00000531146 WDR97A6NE52 1622 aa21.69■■□□□ 1.06
VPS51-210ENST00000531146 CYB5RLQ6IPT4 315 aa21.68■■□□□ 1.06
VPS51-210ENST00000531146 ARAP1Q96P48 1450 aa21.64■■□□□ 1.06
VPS51-210ENST00000531146 GRIN2BQ13224 1484 aa21.63■■□□□ 1.05
VPS51-210ENST00000531146 MAGI1Q96QZ7 1491 aaPredicted RBP21.61■■□□□ 1.05
VPS51-210ENST00000531146 CHMP7Q8WUX9 453 aaPredicted RBP21.59■■□□□ 1.05
VPS51-210ENST00000531146 CLASP1Q7Z460 1538 aa21.59■■□□□ 1.05
VPS51-210ENST00000531146 SYNJ2O15056 1496 aa21.56■■□□□ 1.04
VPS51-210ENST00000531146 GAPVD1Q14C86 1478 aa21.56■■□□□ 1.04
VPS51-210ENST00000531146 PBRM1Q86U86 1689 aa21.54■■□□□ 1.04
VPS51-210ENST00000531146 SYNJ1O43426 1573 aa21.54■■□□□ 1.04
VPS51-210ENST00000531146 ABCA10Q8WWZ4 1543 aa21.54■■□□□ 1.04
VPS51-210ENST00000531146 ABCA5Q8WWZ7 1642 aa21.51■■□□□ 1.03
VPS51-210ENST00000531146 WRNQ14191 1432 aaPredicted RBP eCLIP21.44■■□□□ 1.02
VPS51-210ENST00000531146 TOP2BQ02880 1626 aa21.42■■□□□ 1.02
VPS51-210ENST00000531146 BIVM-ERCC5R4GMW8 1640 aa21.42■■□□□ 1.02
VPS51-210ENST00000531146 TRHP20396 242 aaPredicted RBP21.41■■□□□ 1.02
VPS51-210ENST00000531146 GRIN2AQ12879 1464 aa21.36■■□□□ 1.01
VPS51-210ENST00000531146 ADAMTS12P58397 1594 aa21.35■■□□□ 1.01
VPS51-210ENST00000531146 CEP170Q5SW79 1584 aa21.3■■□□□ 1
VPS51-210ENST00000531146 NUP160Q12769 1436 aa21.29■■□□□ 1
VPS51-210ENST00000531146 ERCC6L2Q5T890 1561 aa21.29■■□□□ 1
VPS51-210ENST00000531146 FHAD1B1AJZ9 1412 aa21.28■■□□□ 1
VPS51-210ENST00000531146 ERICH3Q5RHP9 1530 aa21.25■□□□□ 0.99
VPS51-210ENST00000531146 SHROOM2Q13796 1616 aa21.19■□□□□ 0.98
VPS51-210ENST00000531146 PRG4Q92954 1404 aaPredicted RBP21.09■□□□□ 0.97
VPS51-210ENST00000531146 JPH4Q96JJ6 628 aa21.06■□□□□ 0.96
VPS51-210ENST00000531146 RUSC2Q8N2Y8 1516 aa21.04■□□□□ 0.96
VPS51-210ENST00000531146 IGF1RP08069 1367 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms