RNA–Protein interactions for RNA: ENST00000530796.1

GPAA1-215, Transcript of glycosylphosphatidylinositol anchor attachment 1, humanhuman

TSL 3

Gene GPAA1, Length 936 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPAA1-215ENST00000530796 NISCHQ9Y2I1 1504 aa31.69■■■□□ 2.66
GPAA1-215ENST00000530796 ABCC9O60706 1549 aa28.54■■■□□ 2.16
GPAA1-215ENST00000530796 CCDC180Q9P1Z9 1646 aa28.51■■■□□ 2.15
GPAA1-215ENST00000530796 RB1CC1Q8TDY2 1594 aa27.14■■□□□ 1.93
GPAA1-215ENST00000530796 DNAJC5BQ9UF47 199 aa27.02■■□□□ 1.92
GPAA1-215ENST00000530796 NACADO15069 1562 aa26.95■■□□□ 1.9
GPAA1-215ENST00000530796 UNC13AQ9UPW8 1703 aa26.65■■□□□ 1.86
GPAA1-215ENST00000530796 MYO15BQ96JP2 1530 aa26.62■■□□□ 1.85
GPAA1-215ENST00000530796 DCAF8L2P0C7V8 631 aa26.53■■□□□ 1.84
GPAA1-215ENST00000530796 PABPN1Q86U42 306 aaKnown RBP eCLIP26.52■■□□□ 1.846e-6■□□□□ 9.1
GPAA1-215ENST00000530796 BICRAQ9NZM4 1560 aa26.49■■□□□ 1.83
GPAA1-215ENST00000530796 ZCCHC6Q5VYS8 1495 aaKnown RBP26.25■■□□□ 1.79
GPAA1-215ENST00000530796 DCAF1Q9Y4B6 1507 aa26.22■■□□□ 1.79
GPAA1-215ENST00000530796 SHROOM4Q9ULL8 1493 aa26.04■■□□□ 1.76
GPAA1-215ENST00000530796 SCRIBQ14160 1630 aa25.88■■□□□ 1.73
GPAA1-215ENST00000530796 CC2D2AQ9P2K1 1620 aa25.84■■□□□ 1.73
GPAA1-215ENST00000530796 EIF4G1Q04637 1599 aaKnown RBP25.76■■□□□ 1.71
GPAA1-215ENST00000530796 CECR2Q9BXF3 1484 aa25.73■■□□□ 1.71
GPAA1-215ENST00000530796 NCAPD3P42695 1498 aa24.92■■□□□ 1.58
GPAA1-215ENST00000530796 DNAJC5Q9H3Z4 198 aa24.85■■□□□ 1.57
GPAA1-215ENST00000530796 ATAD2BQ9ULI0 1458 aa24.8■■□□□ 1.56
GPAA1-215ENST00000530796 SMARCA4P51532 1647 aa24.74■■□□□ 1.55
GPAA1-215ENST00000530796 HMGXB3Q12766 1538 aa24.71■■□□□ 1.55
GPAA1-215ENST00000530796 CUX2O14529 1486 aa24.7■■□□□ 1.54
GPAA1-215ENST00000530796 SMARCA2P51531 1590 aa24.67■■□□□ 1.54
GPAA1-215ENST00000530796 PEG3Q9GZU2 1588 aa24.58■■□□□ 1.52
GPAA1-215ENST00000530796 ERCC6Q03468 1493 aa24.57■■□□□ 1.52
GPAA1-215ENST00000530796 BAZ1AQ9NRL2 1556 aaPredicted RBP24.56■■□□□ 1.52
GPAA1-215ENST00000530796 NESP48681 1621 aa24.54■■□□□ 1.52
GPAA1-215ENST00000530796 BAZ1BQ9UIG0 1483 aaKnown RBP24.47■■□□□ 1.51
GPAA1-215ENST00000530796 MROH2BQ7Z745 1585 aa24.42■■□□□ 1.5
GPAA1-215ENST00000530796 THOC2Q8NI27 1593 aaKnown RBP24.37■■□□□ 1.49
GPAA1-215ENST00000530796 LAMC3Q9Y6N6 1575 aa24.34■■□□□ 1.49
GPAA1-215ENST00000530796 KIF21AQ7Z4S6 1674 aa24.23■■□□□ 1.47
GPAA1-215ENST00000530796 PDS5BQ9NTI5 1447 aa24.13■■□□□ 1.45
GPAA1-215ENST00000530796 WIZO95785 1651 aa24.11■■□□□ 1.45
GPAA1-215ENST00000530796 CADPSQ9ULU8 1353 aa24.1■■□□□ 1.45
GPAA1-215ENST00000530796 WDR62O43379 1518 aa23.97■■□□□ 1.43
GPAA1-215ENST00000530796 MRC2Q9UBG0 1479 aa23.97■■□□□ 1.43
GPAA1-215ENST00000530796 RSF1Q96T23 1441 aaPredicted RBP23.86■■□□□ 1.41
GPAA1-215ENST00000530796 CFTRP13569 1480 aa23.84■■□□□ 1.41
GPAA1-215ENST00000530796 CEP164Q9UPV0 1460 aa23.81■■□□□ 1.4
GPAA1-215ENST00000530796 FANCD2Q9BXW9 1451 aa23.81■■□□□ 1.4
GPAA1-215ENST00000530796 TOP2AP11388 1531 aaKnown RBP23.78■■□□□ 1.4
GPAA1-215ENST00000530796 URB2Q14146 1524 aaKnown RBP23.69■■□□□ 1.38
GPAA1-215ENST00000530796 PRDM2Q13029 1718 aa23.59■■□□□ 1.37
GPAA1-215ENST00000530796 TRIM41Q8WV44 630 aa23.53■■□□□ 1.36
GPAA1-215ENST00000530796 CCDC88BA6NC98 1476 aa23.51■■□□□ 1.35
GPAA1-215ENST00000530796 OSCARQ8IYS5 282 aa23.47■■□□□ 1.35
GPAA1-215ENST00000530796 ZNF608Q9ULD9 1512 aaPredicted RBP23.4■■□□□ 1.34
GPAA1-215ENST00000530796 TOPBP1Q92547 1522 aa23.38■■□□□ 1.33
GPAA1-215ENST00000530796 IFT140Q96RY7 1462 aa23.37■■□□□ 1.33
GPAA1-215ENST00000530796 RIMBP3CA6NJZ7 1639 aa23.27■■□□□ 1.32
GPAA1-215ENST00000530796 RIMBP3BA6NNM3 1639 aa23.27■■□□□ 1.32
GPAA1-215ENST00000530796 RIMBP3Q9UFD9 1639 aa23.27■■□□□ 1.32
GPAA1-215ENST00000530796 ABCC8Q09428 1581 aa23.27■■□□□ 1.32
GPAA1-215ENST00000530796 DNMBPQ6XZF7 1577 aa23.27■■□□□ 1.32
GPAA1-215ENST00000530796 EIF4G3O43432 1585 aaKnown RBP23.25■■□□□ 1.31
GPAA1-215ENST00000530796 TARBP1Q13395 1621 aaKnown RBP23.24■■□□□ 1.31
GPAA1-215ENST00000530796 ARHGEF11O15085 1522 aa23.18■■□□□ 1.3
GPAA1-215ENST00000530796 AQRO60306 1485 aaKnown RBP eCLIP23.13■■□□□ 1.294e-8■■■■■ 31.4
GPAA1-215ENST00000530796 POLA1P09884 1462 aaPredicted RBP23.13■■□□□ 1.29
GPAA1-215ENST00000530796 CHD1O14646 1710 aa23.11■■□□□ 1.29
GPAA1-215ENST00000530796 RAD54L2Q9Y4B4 1467 aa23.03■■□□□ 1.28
GPAA1-215ENST00000530796 SOGA1O94964 1423 aa22.96■■□□□ 1.27
GPAA1-215ENST00000530796 ARAP1Q96P48 1450 aa22.96■■□□□ 1.27
GPAA1-215ENST00000530796 CUX1P39880 1505 aa22.95■■□□□ 1.26
GPAA1-215ENST00000530796 TDRD9Q8NDG6 1382 aaKnown RBP22.95■■□□□ 1.26
GPAA1-215ENST00000530796 WDR97A6NE52 1622 aa22.94■■□□□ 1.26
GPAA1-215ENST00000530796 FGD5Q6ZNL6 1462 aa22.94■■□□□ 1.26
GPAA1-215ENST00000530796 CYB5RLQ6IPT4 315 aa22.9■■□□□ 1.26
GPAA1-215ENST00000530796 CLASP1Q7Z460 1538 aa22.89■■□□□ 1.26
GPAA1-215ENST00000530796 SNAPC4Q5SXM2 1469 aa22.88■■□□□ 1.25
GPAA1-215ENST00000530796 FBLN2P98095 1184 aa22.84■■□□□ 1.25
GPAA1-215ENST00000530796 MAGI1Q96QZ7 1491 aaPredicted RBP22.83■■□□□ 1.25
GPAA1-215ENST00000530796 GRIN2BQ13224 1484 aa22.79■■□□□ 1.24
GPAA1-215ENST00000530796 SYNJ2O15056 1496 aa22.75■■□□□ 1.23
GPAA1-215ENST00000530796 SYNJ1O43426 1573 aa22.75■■□□□ 1.23
GPAA1-215ENST00000530796 PBRM1Q86U86 1689 aa22.73■■□□□ 1.23
GPAA1-215ENST00000530796 ABCA10Q8WWZ4 1543 aa22.71■■□□□ 1.23
GPAA1-215ENST00000530796 ABCA5Q8WWZ7 1642 aa22.71■■□□□ 1.23
GPAA1-215ENST00000530796 CHMP7Q8WUX9 453 aaPredicted RBP22.7■■□□□ 1.22
GPAA1-215ENST00000530796 GAPVD1Q14C86 1478 aa22.69■■□□□ 1.22
GPAA1-215ENST00000530796 TRHP20396 242 aaPredicted RBP22.6■■□□□ 1.21
GPAA1-215ENST00000530796 BIVM-ERCC5R4GMW8 1640 aa22.56■■□□□ 1.2
GPAA1-215ENST00000530796 TOP2BQ02880 1626 aa22.53■■□□□ 1.2
GPAA1-215ENST00000530796 GRIN2AQ12879 1464 aa22.53■■□□□ 1.2
GPAA1-215ENST00000530796 ADAMTS12P58397 1594 aa22.51■■□□□ 1.19
GPAA1-215ENST00000530796 ERCC6L2Q5T890 1561 aa22.51■■□□□ 1.19
GPAA1-215ENST00000530796 WRNQ14191 1432 aaPredicted RBP eCLIP22.51■■□□□ 1.19
GPAA1-215ENST00000530796 NUP160Q12769 1436 aa22.5■■□□□ 1.19
GPAA1-215ENST00000530796 SUPT5HO00267 1087 aaKnown RBP22.5■■□□□ 1.19
GPAA1-215ENST00000530796 CEP170Q5SW79 1584 aa22.49■■□□□ 1.19
GPAA1-215ENST00000530796 SHROOM2Q13796 1616 aa22.46■■□□□ 1.19
GPAA1-215ENST00000530796 ERICH3Q5RHP9 1530 aa22.41■■□□□ 1.18
GPAA1-215ENST00000530796 FHAD1B1AJZ9 1412 aa22.4■■□□□ 1.18
GPAA1-215ENST00000530796 KIF13AQ9H1H9 1805 aa22.22■■□□□ 1.15
GPAA1-215ENST00000530796 PRG4Q92954 1404 aaPredicted RBP22.22■■□□□ 1.15
GPAA1-215ENST00000530796 RUSC2Q8N2Y8 1516 aa22.21■■□□□ 1.15
GPAA1-215ENST00000530796 JPH4Q96JJ6 628 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms