RNA–Protein interactions for RNA: ENST00000530471.1

SLC35C1-204, Transcript of solute carrier family 35 member C1, humanhuman

TSL 3

Gene SLC35C1, Length 695 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC35C1-204ENST00000530471 NISCHQ9Y2I1 1504 aa51.03■■■■■ 5.76
SLC35C1-204ENST00000530471 CCDC180Q9P1Z9 1646 aa45.52■■■■■ 4.88
SLC35C1-204ENST00000530471 ABCC9O60706 1549 aa44.58■■■■■ 4.73
SLC35C1-204ENST00000530471 RB1CC1Q8TDY2 1594 aa42.92■■■■■ 4.46
SLC35C1-204ENST00000530471 NACADO15069 1562 aa42.87■■■■■ 4.45
SLC35C1-204ENST00000530471 MYO15BQ96JP2 1530 aa42.71■■■■■ 4.43
SLC35C1-204ENST00000530471 ZCCHC6Q5VYS8 1495 aaKnown RBP42.47■■■■■ 4.39
SLC35C1-204ENST00000530471 DCAF1Q9Y4B6 1507 aa42.38■■■■■ 4.37
SLC35C1-204ENST00000530471 DCAF8L2P0C7V8 631 aa42.33■■■■■ 4.37
SLC35C1-204ENST00000530471 UNC13AQ9UPW8 1703 aa41.86■■■■■ 4.29
SLC35C1-204ENST00000530471 BICRAQ9NZM4 1560 aa41.68■■■■■ 4.26
SLC35C1-204ENST00000530471 PABPN1Q86U42 306 aaKnown RBP eCLIP41.56■■■■■ 4.24
SLC35C1-204ENST00000530471 SHROOM4Q9ULL8 1493 aa41.41■■■■■ 4.22
SLC35C1-204ENST00000530471 SCRIBQ14160 1630 aa41.27■■■■■ 4.2
SLC35C1-204ENST00000530471 DNAJC5BQ9UF47 199 aa41.27■■■■■ 4.2
SLC35C1-204ENST00000530471 EIF4G1Q04637 1599 aaKnown RBP40.56■■■■■ 4.08
SLC35C1-204ENST00000530471 CC2D2AQ9P2K1 1620 aa40.41■■■■■ 4.06
SLC35C1-204ENST00000530471 CECR2Q9BXF3 1484 aa40.18■■■■■ 4.02
SLC35C1-204ENST00000530471 NCAPD3P42695 1498 aa39.62■■■■□ 3.93
SLC35C1-204ENST00000530471 SMARCA4P51532 1647 aa39.6■■■■□ 3.93
SLC35C1-204ENST00000530471 BAZ1AQ9NRL2 1556 aaPredicted RBP39.56■■■■□ 3.92
SLC35C1-204ENST00000530471 ATAD2BQ9ULI0 1458 aa39.5■■■■□ 3.91
SLC35C1-204ENST00000530471 SMARCA2P51531 1590 aa39.44■■■■□ 3.9
SLC35C1-204ENST00000530471 PEG3Q9GZU2 1588 aa39.4■■■■□ 3.9
SLC35C1-204ENST00000530471 HMGXB3Q12766 1538 aa39.36■■■■□ 3.89
SLC35C1-204ENST00000530471 MROH2BQ7Z745 1585 aa39.25■■■■□ 3.87
SLC35C1-204ENST00000530471 BAZ1BQ9UIG0 1483 aaKnown RBP39.07■■■■□ 3.85
SLC35C1-204ENST00000530471 RSF1Q96T23 1441 aaPredicted RBP38.74■■■■□ 3.79
SLC35C1-204ENST00000530471 WIZO95785 1651 aa38.74■■■■□ 3.79
SLC35C1-204ENST00000530471 LAMC3Q9Y6N6 1575 aa38.54■■■■□ 3.76
SLC35C1-204ENST00000530471 NESP48681 1621 aa38.52■■■■□ 3.76
SLC35C1-204ENST00000530471 ERCC6Q03468 1493 aa38.43■■■■□ 3.74
SLC35C1-204ENST00000530471 TOP2AP11388 1531 aaKnown RBP38.42■■■■□ 3.74
SLC35C1-204ENST00000530471 CADPSQ9ULU8 1353 aa38.36■■■■□ 3.73
SLC35C1-204ENST00000530471 CUX2O14529 1486 aa38.35■■■■□ 3.73
SLC35C1-204ENST00000530471 PDS5BQ9NTI5 1447 aa38.26■■■■□ 3.72
SLC35C1-204ENST00000530471 THOC2Q8NI27 1593 aaKnown RBP38.12■■■■□ 3.69
SLC35C1-204ENST00000530471 CFTRP13569 1480 aa38.12■■■■□ 3.69
SLC35C1-204ENST00000530471 KIF21AQ7Z4S6 1674 aa38.05■■■■□ 3.68
SLC35C1-204ENST00000530471 CCDC88BA6NC98 1476 aa37.94■■■■□ 3.66
SLC35C1-204ENST00000530471 MRC2Q9UBG0 1479 aa37.86■■■■□ 3.65
SLC35C1-204ENST00000530471 FANCD2Q9BXW9 1451 aa37.85■■■■□ 3.65
SLC35C1-204ENST00000530471 CEP164Q9UPV0 1460 aa37.82■■■■□ 3.64
SLC35C1-204ENST00000530471 WDR62O43379 1518 aa37.81■■■■□ 3.64
SLC35C1-204ENST00000530471 PRDM2Q13029 1718 aa37.7■■■■□ 3.63
SLC35C1-204ENST00000530471 URB2Q14146 1524 aaKnown RBP37.51■■■■□ 3.6
SLC35C1-204ENST00000530471 DNAJC5Q9H3Z4 198 aa37.46■■■■□ 3.59
SLC35C1-204ENST00000530471 ABCC8Q09428 1581 aa37.3■■■■□ 3.56
SLC35C1-204ENST00000530471 TOPBP1Q92547 1522 aa37.23■■■■□ 3.55
SLC35C1-204ENST00000530471 SUPT5HO00267 1087 aaKnown RBP37.22■■■■□ 3.55
SLC35C1-204ENST00000530471 DNMBPQ6XZF7 1577 aa37.18■■■■□ 3.54
SLC35C1-204ENST00000530471 IFT140Q96RY7 1462 aa37.11■■■■□ 3.53
SLC35C1-204ENST00000530471 POLA1P09884 1462 aaPredicted RBP36.91■■■■□ 3.5
SLC35C1-204ENST00000530471 TARBP1Q13395 1621 aaKnown RBP36.89■■■■□ 3.5
SLC35C1-204ENST00000530471 ZNF608Q9ULD9 1512 aaPredicted RBP36.88■■■■□ 3.49
SLC35C1-204ENST00000530471 CUX1P39880 1505 aa36.84■■■■□ 3.49
SLC35C1-204ENST00000530471 FGD5Q6ZNL6 1462 aa36.73■■■■□ 3.47
SLC35C1-204ENST00000530471 EIF4G3O43432 1585 aaKnown RBP36.73■■■■□ 3.47
SLC35C1-204ENST00000530471 SOGA1O94964 1423 aa36.71■■■■□ 3.47
SLC35C1-204ENST00000530471 WDR97A6NE52 1622 aa36.7■■■■□ 3.47
SLC35C1-204ENST00000530471 RAD54L2Q9Y4B4 1467 aa36.66■■■■□ 3.46
SLC35C1-204ENST00000530471 AQRO60306 1485 aaKnown RBP eCLIP36.62■■■■□ 3.45
SLC35C1-204ENST00000530471 OSCARQ8IYS5 282 aa36.59■■■■□ 3.45
SLC35C1-204ENST00000530471 TOP2BQ02880 1626 aa36.49■■■■□ 3.43
SLC35C1-204ENST00000530471 WRNQ14191 1432 aaPredicted RBP eCLIP36.49■■■■□ 3.43
SLC35C1-204ENST00000530471 BIVM-ERCC5R4GMW8 1640 aa36.48■■■■□ 3.43
SLC35C1-204ENST00000530471 TDRD9Q8NDG6 1382 aaKnown RBP36.48■■■■□ 3.43
SLC35C1-204ENST00000530471 ABCA10Q8WWZ4 1543 aa36.47■■■■□ 3.43
SLC35C1-204ENST00000530471 SYNJ1O43426 1573 aa36.39■■■■□ 3.42
SLC35C1-204ENST00000530471 GRIN2BQ13224 1484 aa36.37■■■■□ 3.41
SLC35C1-204ENST00000530471 MAGI1Q96QZ7 1491 aaPredicted RBP36.33■■■■□ 3.41
SLC35C1-204ENST00000530471 ABCA5Q8WWZ7 1642 aa36.32■■■■□ 3.4
SLC35C1-204ENST00000530471 GAPVD1Q14C86 1478 aa36.29■■■■□ 3.4
SLC35C1-204ENST00000530471 SNAPC4Q5SXM2 1469 aa36.28■■■■□ 3.4
SLC35C1-204ENST00000530471 CHD1O14646 1710 aa36.25■■■■□ 3.39
SLC35C1-204ENST00000530471 SYNJ2O15056 1496 aa36.18■■■■□ 3.38
SLC35C1-204ENST00000530471 PBRM1Q86U86 1689 aa36.17■■■■□ 3.38
SLC35C1-204ENST00000530471 FBLN2P98095 1184 aa36.04■■■■□ 3.36
SLC35C1-204ENST00000530471 CHMP7Q8WUX9 453 aaPredicted RBP36.04■■■■□ 3.36
SLC35C1-204ENST00000530471 ARHGEF11O15085 1522 aa36.03■■■■□ 3.36
SLC35C1-204ENST00000530471 ERICH3Q5RHP9 1530 aa36.03■■■■□ 3.36
SLC35C1-204ENST00000530471 CLASP1Q7Z460 1538 aa36.03■■■■□ 3.36
SLC35C1-204ENST00000530471 RIMBP3CA6NJZ7 1639 aa36.01■■■■□ 3.36
SLC35C1-204ENST00000530471 RIMBP3BA6NNM3 1639 aa36.01■■■■□ 3.36
SLC35C1-204ENST00000530471 RIMBP3Q9UFD9 1639 aa36.01■■■■□ 3.36
SLC35C1-204ENST00000530471 ADAMTS12P58397 1594 aa35.95■■■■□ 3.35
SLC35C1-204ENST00000530471 FHAD1B1AJZ9 1412 aa35.91■■■■□ 3.34
SLC35C1-204ENST00000530471 GRIN2AQ12879 1464 aa35.88■■■■□ 3.33
SLC35C1-204ENST00000530471 NUP160Q12769 1436 aa35.82■■■■□ 3.32
SLC35C1-204ENST00000530471 TRIM41Q8WV44 630 aa35.78■■■■□ 3.32
SLC35C1-204ENST00000530471 KIF27Q86VH2 1401 aa35.74■■■■□ 3.31
SLC35C1-204ENST00000530471 ARAP1Q96P48 1450 aa35.72■■■■□ 3.31
SLC35C1-204ENST00000530471 IGF1RP08069 1367 aa35.7■■■■□ 3.31
SLC35C1-204ENST00000530471 CEP170Q5SW79 1584 aa35.69■■■■□ 3.3
SLC35C1-204ENST00000530471 CUL7Q14999 1698 aa35.59■■■■□ 3.29
SLC35C1-204ENST00000530471 SHROOM2Q13796 1616 aa35.57■■■■□ 3.29
SLC35C1-204ENST00000530471 CYB5RLQ6IPT4 315 aa35.56■■■■□ 3.28
SLC35C1-204ENST00000530471 RUSC2Q8N2Y8 1516 aa35.43■■■■□ 3.26
SLC35C1-204ENST00000530471 CARMIL1Q5VZK9 1371 aa35.4■■■■□ 3.26
SLC35C1-204ENST00000530471 ERCC6L2Q5T890 1561 aa35.38■■■■□ 3.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms