RNA–Protein interactions for RNA: ENST00000530468.5

TM9SF1-209, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 2

Gene TM9SF1, Length 1,065 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-209ENST00000530468 NISCHQ9Y2I1 1504 aa39.12■■■■□ 3.85
TM9SF1-209ENST00000530468 CCDC180Q9P1Z9 1646 aa35.13■■■■□ 3.21
TM9SF1-209ENST00000530468 ABCC9O60706 1549 aa35.11■■■■□ 3.21
TM9SF1-209ENST00000530468 RB1CC1Q8TDY2 1594 aa33.47■■■□□ 2.95
TM9SF1-209ENST00000530468 NACADO15069 1562 aa33.24■■■□□ 2.91
TM9SF1-209ENST00000530468 DCAF8L2P0C7V8 631 aa32.98■■■□□ 2.87
TM9SF1-209ENST00000530468 DNAJC5BQ9UF47 199 aa32.93■■■□□ 2.86
TM9SF1-209ENST00000530468 MYO15BQ96JP2 1530 aa32.81■■■□□ 2.84
TM9SF1-209ENST00000530468 PABPN1Q86U42 306 aaKnown RBP eCLIP32.67■■■□□ 2.82
TM9SF1-209ENST00000530468 UNC13AQ9UPW8 1703 aa32.6■■■□□ 2.81
TM9SF1-209ENST00000530468 BICRAQ9NZM4 1560 aa32.44■■■□□ 2.78
TM9SF1-209ENST00000530468 ZCCHC6Q5VYS8 1495 aaKnown RBP32.42■■■□□ 2.78
TM9SF1-209ENST00000530468 DCAF1Q9Y4B6 1507 aa32.36■■■□□ 2.77
TM9SF1-209ENST00000530468 SHROOM4Q9ULL8 1493 aa32.12■■■□□ 2.73
TM9SF1-209ENST00000530468 SCRIBQ14160 1630 aa31.95■■■□□ 2.71
TM9SF1-209ENST00000530468 CC2D2AQ9P2K1 1620 aa31.72■■■□□ 2.67
TM9SF1-209ENST00000530468 EIF4G1Q04637 1599 aaKnown RBP31.67■■■□□ 2.66
TM9SF1-209ENST00000530468 CECR2Q9BXF3 1484 aa31.66■■■□□ 2.66
TM9SF1-209ENST00000530468 NCAPD3P42695 1498 aa30.69■■■□□ 2.5
TM9SF1-209ENST00000530468 ATAD2BQ9ULI0 1458 aa30.57■■■□□ 2.48
TM9SF1-209ENST00000530468 SMARCA4P51532 1647 aa30.51■■■□□ 2.47
TM9SF1-209ENST00000530468 SMARCA2P51531 1590 aa30.5■■■□□ 2.47
TM9SF1-209ENST00000530468 HMGXB3Q12766 1538 aa30.46■■■□□ 2.47
TM9SF1-209ENST00000530468 BAZ1AQ9NRL2 1556 aaPredicted RBP30.38■■■□□ 2.45
TM9SF1-209ENST00000530468 ERCC6Q03468 1493 aa30.36■■■□□ 2.45
TM9SF1-209ENST00000530468 CUX2O14529 1486 aa30.35■■■□□ 2.45
TM9SF1-209ENST00000530468 DNAJC5Q9H3Z4 198 aa30.32■■■□□ 2.44
TM9SF1-209ENST00000530468 BAZ1BQ9UIG0 1483 aaKnown RBP30.27■■■□□ 2.44
TM9SF1-209ENST00000530468 PEG3Q9GZU2 1588 aa30.24■■■□□ 2.43
TM9SF1-209ENST00000530468 NESP48681 1621 aa30.14■■■□□ 2.41
TM9SF1-209ENST00000530468 MROH2BQ7Z745 1585 aa30.11■■■□□ 2.41
TM9SF1-209ENST00000530468 LAMC3Q9Y6N6 1575 aa29.99■■■□□ 2.39
TM9SF1-209ENST00000530468 THOC2Q8NI27 1593 aaKnown RBP29.87■■■□□ 2.37
TM9SF1-209ENST00000530468 PDS5BQ9NTI5 1447 aa29.84■■■□□ 2.37
TM9SF1-209ENST00000530468 CADPSQ9ULU8 1353 aa29.75■■■□□ 2.35
TM9SF1-209ENST00000530468 KIF21AQ7Z4S6 1674 aa29.74■■■□□ 2.35
TM9SF1-209ENST00000530468 WIZO95785 1651 aa29.72■■■□□ 2.35
TM9SF1-209ENST00000530468 MRC2Q9UBG0 1479 aa29.56■■■□□ 2.32
TM9SF1-209ENST00000530468 RSF1Q96T23 1441 aaPredicted RBP29.5■■■□□ 2.31
TM9SF1-209ENST00000530468 WDR62O43379 1518 aa29.48■■■□□ 2.31
TM9SF1-209ENST00000530468 CEP164Q9UPV0 1460 aa29.44■■■□□ 2.3
TM9SF1-209ENST00000530468 TOP2AP11388 1531 aaKnown RBP29.4■■■□□ 2.3
TM9SF1-209ENST00000530468 CFTRP13569 1480 aa29.4■■■□□ 2.3
TM9SF1-209ENST00000530468 FANCD2Q9BXW9 1451 aa29.39■■■□□ 2.3
TM9SF1-209ENST00000530468 URB2Q14146 1524 aaKnown RBP29.13■■■□□ 2.25
TM9SF1-209ENST00000530468 PRDM2Q13029 1718 aa29.05■■■□□ 2.24
TM9SF1-209ENST00000530468 CCDC88BA6NC98 1476 aa29.04■■■□□ 2.24
TM9SF1-209ENST00000530468 TRIM41Q8WV44 630 aa28.95■■■□□ 2.22
TM9SF1-209ENST00000530468 OSCARQ8IYS5 282 aa28.94■■■□□ 2.22
TM9SF1-209ENST00000530468 IFT140Q96RY7 1462 aa28.86■■■□□ 2.21
TM9SF1-209ENST00000530468 TOPBP1Q92547 1522 aa28.83■■■□□ 2.21
TM9SF1-209ENST00000530468 ABCC8Q09428 1581 aa28.82■■■□□ 2.2
TM9SF1-209ENST00000530468 ZNF608Q9ULD9 1512 aaPredicted RBP28.76■■■□□ 2.19
TM9SF1-209ENST00000530468 DNMBPQ6XZF7 1577 aa28.72■■■□□ 2.19
TM9SF1-209ENST00000530468 EIF4G3O43432 1585 aaKnown RBP28.62■■■□□ 2.17
TM9SF1-209ENST00000530468 TARBP1Q13395 1621 aaKnown RBP28.55■■■□□ 2.16
TM9SF1-209ENST00000530468 POLA1P09884 1462 aaPredicted RBP28.53■■■□□ 2.16
TM9SF1-209ENST00000530468 RIMBP3CA6NJZ7 1639 aa28.51■■■□□ 2.15
TM9SF1-209ENST00000530468 RIMBP3BA6NNM3 1639 aa28.51■■■□□ 2.15
TM9SF1-209ENST00000530468 RIMBP3Q9UFD9 1639 aa28.51■■■□□ 2.15
TM9SF1-209ENST00000530468 AQRO60306 1485 aaKnown RBP eCLIP28.51■■■□□ 2.15
TM9SF1-209ENST00000530468 ARHGEF11O15085 1522 aa28.45■■■□□ 2.15
TM9SF1-209ENST00000530468 SOGA1O94964 1423 aa28.4■■■□□ 2.14
TM9SF1-209ENST00000530468 RAD54L2Q9Y4B4 1467 aa28.4■■■□□ 2.14
TM9SF1-209ENST00000530468 CHD1O14646 1710 aa28.37■■■□□ 2.13
TM9SF1-209ENST00000530468 WDR97A6NE52 1622 aa28.34■■■□□ 2.13
TM9SF1-209ENST00000530468 FGD5Q6ZNL6 1462 aa28.34■■■□□ 2.13
TM9SF1-209ENST00000530468 FBLN2P98095 1184 aa28.33■■■□□ 2.13
TM9SF1-209ENST00000530468 TDRD9Q8NDG6 1382 aaKnown RBP28.33■■■□□ 2.13
TM9SF1-209ENST00000530468 CUX1P39880 1505 aa28.3■■■□□ 2.12
TM9SF1-209ENST00000530468 SNAPC4Q5SXM2 1469 aa28.23■■■□□ 2.11
TM9SF1-209ENST00000530468 CYB5RLQ6IPT4 315 aa28.22■■■□□ 2.11
TM9SF1-209ENST00000530468 MAGI1Q96QZ7 1491 aaPredicted RBP28.2■■■□□ 2.1
TM9SF1-209ENST00000530468 GRIN2BQ13224 1484 aa28.18■■■□□ 2.1
TM9SF1-209ENST00000530468 ARAP1Q96P48 1450 aa28.16■■■□□ 2.1
TM9SF1-209ENST00000530468 CHMP7Q8WUX9 453 aaPredicted RBP28.14■■■□□ 2.1
TM9SF1-209ENST00000530468 SUPT5HO00267 1087 aaKnown RBP28.13■■■□□ 2.09
TM9SF1-209ENST00000530468 CLASP1Q7Z460 1538 aa28.1■■■□□ 2.09
TM9SF1-209ENST00000530468 SYNJ1O43426 1573 aa28.1■■■□□ 2.09
TM9SF1-209ENST00000530468 SYNJ2O15056 1496 aa28.08■■■□□ 2.09
TM9SF1-209ENST00000530468 GAPVD1Q14C86 1478 aa28.07■■■□□ 2.08
TM9SF1-209ENST00000530468 ABCA10Q8WWZ4 1543 aa28.04■■■□□ 2.08
TM9SF1-209ENST00000530468 PBRM1Q86U86 1689 aa28.01■■■□□ 2.07
TM9SF1-209ENST00000530468 ABCA5Q8WWZ7 1642 aa27.98■■■□□ 2.07
TM9SF1-209ENST00000530468 WRNQ14191 1432 aaPredicted RBP eCLIP27.93■■■□□ 2.06
TM9SF1-209ENST00000530468 TRHP20396 242 aaPredicted RBP27.93■■■□□ 2.06
TM9SF1-209ENST00000530468 TOP2BQ02880 1626 aa27.85■■■□□ 2.05
TM9SF1-209ENST00000530468 BIVM-ERCC5R4GMW8 1640 aa27.85■■■□□ 2.05
TM9SF1-209ENST00000530468 GRIN2AQ12879 1464 aa27.81■■■□□ 2.04
TM9SF1-209ENST00000530468 ADAMTS12P58397 1594 aa27.77■■■□□ 2.04
TM9SF1-209ENST00000530468 FHAD1B1AJZ9 1412 aa27.73■■■□□ 2.03
TM9SF1-209ENST00000530468 NUP160Q12769 1436 aa27.73■■■□□ 2.03
TM9SF1-209ENST00000530468 ERICH3Q5RHP9 1530 aa27.7■■■□□ 2.02
TM9SF1-209ENST00000530468 CEP170Q5SW79 1584 aa27.68■■■□□ 2.02
TM9SF1-209ENST00000530468 ERCC6L2Q5T890 1561 aa27.6■■■□□ 2.01
TM9SF1-209ENST00000530468 SHROOM2Q13796 1616 aa27.58■■■□□ 2.01
TM9SF1-209ENST00000530468 PRG4Q92954 1404 aaPredicted RBP27.44■■□□□ 1.98
TM9SF1-209ENST00000530468 JPH4Q96JJ6 628 aa27.42■■□□□ 1.98
TM9SF1-209ENST00000530468 RUSC2Q8N2Y8 1516 aa27.38■■□□□ 1.97
TM9SF1-209ENST00000530468 KIF27Q86VH2 1401 aa27.34■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms