RNA–Protein interactions for RNA: ENST00000530092.2

ABCA7-212, Transcript of ATP binding cassette subfamily A member 7, humanhuman

TSL 4

Gene ABCA7, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA7-212ENST00000530092 NISCHQ9Y2I1 1504 aa44.45■■■■■ 4.71
ABCA7-212ENST00000530092 CCDC180Q9P1Z9 1646 aa39.98■■■■□ 3.99
ABCA7-212ENST00000530092 ABCC9O60706 1549 aa39.96■■■■□ 3.99
ABCA7-212ENST00000530092 RB1CC1Q8TDY2 1594 aa37.99■■■■□ 3.67
ABCA7-212ENST00000530092 NACADO15069 1562 aa37.72■■■■□ 3.63
ABCA7-212ENST00000530092 DNAJC5BQ9UF47 199 aa37.59■■■■□ 3.61
ABCA7-212ENST00000530092 UNC13AQ9UPW8 1703 aa37.43■■■■□ 3.58
ABCA7-212ENST00000530092 DCAF8L2P0C7V8 631 aa37.36■■■■□ 3.57
ABCA7-212ENST00000530092 MYO15BQ96JP2 1530 aa37.15■■■■□ 3.54
ABCA7-212ENST00000530092 PABPN1Q86U42 306 aaKnown RBP eCLIP37.15■■■■□ 3.541e-6■■□□□ 13.6
ABCA7-212ENST00000530092 BICRAQ9NZM4 1560 aa37.04■■■■□ 3.52
ABCA7-212ENST00000530092 ZCCHC6Q5VYS8 1495 aaKnown RBP36.85■■■■□ 3.49
ABCA7-212ENST00000530092 DCAF1Q9Y4B6 1507 aa36.69■■■■□ 3.46
ABCA7-212ENST00000530092 SCRIBQ14160 1630 aa36.43■■■■□ 3.42
ABCA7-212ENST00000530092 SHROOM4Q9ULL8 1493 aa36.33■■■■□ 3.41
ABCA7-212ENST00000530092 CC2D2AQ9P2K1 1620 aa36.16■■■■□ 3.38
ABCA7-212ENST00000530092 EIF4G1Q04637 1599 aaKnown RBP36.06■■■■□ 3.36
ABCA7-212ENST00000530092 CECR2Q9BXF3 1484 aa35.97■■■■□ 3.35
ABCA7-212ENST00000530092 NCAPD3P42695 1498 aa34.8■■■■□ 3.16
ABCA7-212ENST00000530092 SMARCA4P51532 1647 aa34.75■■■■□ 3.15
ABCA7-212ENST00000530092 ATAD2BQ9ULI0 1458 aa34.72■■■■□ 3.15
ABCA7-212ENST00000530092 SMARCA2P51531 1590 aa34.59■■■■□ 3.13
ABCA7-212ENST00000530092 HMGXB3Q12766 1538 aa34.59■■■■□ 3.13
ABCA7-212ENST00000530092 BAZ1AQ9NRL2 1556 aaPredicted RBP34.47■■■■□ 3.11
ABCA7-212ENST00000530092 DNAJC5Q9H3Z4 198 aa34.43■■■■□ 3.1
ABCA7-212ENST00000530092 CUX2O14529 1486 aa34.41■■■■□ 3.1
ABCA7-212ENST00000530092 ERCC6Q03468 1493 aa34.41■■■■□ 3.1
ABCA7-212ENST00000530092 NESP48681 1621 aa34.39■■■■□ 3.1
ABCA7-212ENST00000530092 PEG3Q9GZU2 1588 aa34.39■■■■□ 3.1
ABCA7-212ENST00000530092 BAZ1BQ9UIG0 1483 aaKnown RBP34.34■■■■□ 3.09
ABCA7-212ENST00000530092 MROH2BQ7Z745 1585 aa34.3■■■■□ 3.08
ABCA7-212ENST00000530092 THOC2Q8NI27 1593 aaKnown RBP34.1■■■■□ 3.05
ABCA7-212ENST00000530092 LAMC3Q9Y6N6 1575 aa34.06■■■■□ 3.04
ABCA7-212ENST00000530092 KIF21AQ7Z4S6 1674 aa34.03■■■■□ 3.04
ABCA7-212ENST00000530092 WIZO95785 1651 aa33.95■■■■□ 3.03
ABCA7-212ENST00000530092 PDS5BQ9NTI5 1447 aa33.76■■■□□ 2.99
ABCA7-212ENST00000530092 CADPSQ9ULU8 1353 aa33.71■■■□□ 2.99
ABCA7-212ENST00000530092 MRC2Q9UBG0 1479 aa33.56■■■□□ 2.96
ABCA7-212ENST00000530092 WDR62O43379 1518 aa33.53■■■□□ 2.96
ABCA7-212ENST00000530092 RSF1Q96T23 1441 aaPredicted RBP33.51■■■□□ 2.95
ABCA7-212ENST00000530092 TOP2AP11388 1531 aaKnown RBP33.42■■■□□ 2.94
ABCA7-212ENST00000530092 CEP164Q9UPV0 1460 aa33.39■■■□□ 2.94
ABCA7-212ENST00000530092 CFTRP13569 1480 aa33.37■■■□□ 2.93
ABCA7-212ENST00000530092 FANCD2Q9BXW9 1451 aa33.37■■■□□ 2.93
ABCA7-212ENST00000530092 PRDM2Q13029 1718 aa33.23■■■□□ 2.91
ABCA7-212ENST00000530092 URB2Q14146 1524 aaKnown RBP33.18■■■□□ 2.9
ABCA7-212ENST00000530092 CCDC88BA6NC98 1476 aa33.03■■■□□ 2.88
ABCA7-212ENST00000530092 TRIM41Q8WV44 630 aa32.88■■■□□ 2.85
ABCA7-212ENST00000530092 ZNF608Q9ULD9 1512 aaPredicted RBP32.77■■■□□ 2.84
ABCA7-212ENST00000530092 TOPBP1Q92547 1522 aa32.77■■■□□ 2.84
ABCA7-212ENST00000530092 OSCARQ8IYS5 282 aa32.73■■■□□ 2.83
ABCA7-212ENST00000530092 IFT140Q96RY7 1462 aa32.71■■■□□ 2.83
ABCA7-212ENST00000530092 DNMBPQ6XZF7 1577 aa32.66■■■□□ 2.82
ABCA7-212ENST00000530092 EIF4G3O43432 1585 aaKnown RBP32.62■■■□□ 2.81
ABCA7-212ENST00000530092 TARBP1Q13395 1621 aaKnown RBP32.57■■■□□ 2.8
ABCA7-212ENST00000530092 ABCC8Q09428 1581 aa32.57■■■□□ 2.8
ABCA7-212ENST00000530092 RIMBP3CA6NJZ7 1639 aa32.55■■■□□ 2.8
ABCA7-212ENST00000530092 RIMBP3BA6NNM3 1639 aa32.55■■■□□ 2.8
ABCA7-212ENST00000530092 RIMBP3Q9UFD9 1639 aa32.55■■■□□ 2.8
ABCA7-212ENST00000530092 CHD1O14646 1710 aa32.47■■■□□ 2.79
ABCA7-212ENST00000530092 POLA1P09884 1462 aaPredicted RBP32.43■■■□□ 2.78
ABCA7-212ENST00000530092 AQRO60306 1485 aaKnown RBP eCLIP32.42■■■□□ 2.787e-8■■■■□ 24.7
ABCA7-212ENST00000530092 ARHGEF11O15085 1522 aa32.37■■■□□ 2.77
ABCA7-212ENST00000530092 RAD54L2Q9Y4B4 1467 aa32.33■■■□□ 2.77
ABCA7-212ENST00000530092 CUX1P39880 1505 aa32.24■■■□□ 2.75
ABCA7-212ENST00000530092 FGD5Q6ZNL6 1462 aa32.22■■■□□ 2.75
ABCA7-212ENST00000530092 SOGA1O94964 1423 aa32.19■■■□□ 2.74
ABCA7-212ENST00000530092 TDRD9Q8NDG6 1382 aaKnown RBP32.17■■■□□ 2.74
ABCA7-212ENST00000530092 WDR97A6NE52 1622 aa32.14■■■□□ 2.74
ABCA7-212ENST00000530092 SNAPC4Q5SXM2 1469 aa32.1■■■□□ 2.73
ABCA7-212ENST00000530092 ARAP1Q96P48 1450 aa32.08■■■□□ 2.73
ABCA7-212ENST00000530092 FBLN2P98095 1184 aa32.07■■■□□ 2.72
ABCA7-212ENST00000530092 CLASP1Q7Z460 1538 aa32.01■■■□□ 2.72
ABCA7-212ENST00000530092 CYB5RLQ6IPT4 315 aa32.01■■■□□ 2.71
ABCA7-212ENST00000530092 PBRM1Q86U86 1689 aa32.01■■■□□ 2.71
ABCA7-212ENST00000530092 MAGI1Q96QZ7 1491 aaPredicted RBP31.96■■■□□ 2.71
ABCA7-212ENST00000530092 GRIN2BQ13224 1484 aa31.94■■■□□ 2.7
ABCA7-212ENST00000530092 SYNJ1O43426 1573 aa31.89■■■□□ 2.7
ABCA7-212ENST00000530092 ABCA5Q8WWZ7 1642 aa31.88■■■□□ 2.69
ABCA7-212ENST00000530092 SUPT5HO00267 1087 aaKnown RBP31.87■■■□□ 2.69
ABCA7-212ENST00000530092 SYNJ2O15056 1496 aa31.86■■■□□ 2.69
ABCA7-212ENST00000530092 GAPVD1Q14C86 1478 aa31.84■■■□□ 2.69
ABCA7-212ENST00000530092 ABCA10Q8WWZ4 1543 aa31.83■■■□□ 2.69
ABCA7-212ENST00000530092 CHMP7Q8WUX9 453 aaPredicted RBP31.82■■■□□ 2.68
ABCA7-212ENST00000530092 BIVM-ERCC5R4GMW8 1640 aa31.74■■■□□ 2.67
ABCA7-212ENST00000530092 TOP2BQ02880 1626 aa31.68■■■□□ 2.66
ABCA7-212ENST00000530092 ADAMTS12P58397 1594 aa31.63■■■□□ 2.65
ABCA7-212ENST00000530092 TRHP20396 242 aaPredicted RBP31.62■■■□□ 2.65
ABCA7-212ENST00000530092 WRNQ14191 1432 aaPredicted RBP eCLIP31.59■■■□□ 2.65
ABCA7-212ENST00000530092 GRIN2AQ12879 1464 aa31.57■■■□□ 2.64
ABCA7-212ENST00000530092 ERCC6L2Q5T890 1561 aa31.56■■■□□ 2.64
ABCA7-212ENST00000530092 CEP170Q5SW79 1584 aa31.56■■■□□ 2.64
ABCA7-212ENST00000530092 NUP160Q12769 1436 aa31.48■■■□□ 2.63
ABCA7-212ENST00000530092 SHROOM2Q13796 1616 aa31.44■■■□□ 2.62
ABCA7-212ENST00000530092 ERICH3Q5RHP9 1530 aa31.42■■■□□ 2.62
ABCA7-212ENST00000530092 FHAD1B1AJZ9 1412 aa31.4■■■□□ 2.62
ABCA7-212ENST00000530092 RUSC2Q8N2Y8 1516 aa31.19■■■□□ 2.58
ABCA7-212ENST00000530092 KIF13AQ9H1H9 1805 aa31.14■■■□□ 2.58
ABCA7-212ENST00000530092 PRG4Q92954 1404 aaPredicted RBP31.13■■■□□ 2.57
ABCA7-212ENST00000530092 JPH4Q96JJ6 628 aa31.05■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms