RNA–Protein interactions for RNA: ENST00000529981.1

SCYL1-211, Transcript of SCY1 like pseudokinase 1, humanhuman

TSL 3

Gene SCYL1, Length 497 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCYL1-211ENST00000529981 NISCHQ9Y2I1 1504 aa34.36■■■■□ 3.09
SCYL1-211ENST00000529981 CCDC180Q9P1Z9 1646 aa30.48■■■□□ 2.47
SCYL1-211ENST00000529981 ABCC9O60706 1549 aa29.46■■■□□ 2.31
SCYL1-211ENST00000529981 ZCCHC6Q5VYS8 1495 aaKnown RBP28.71■■■□□ 2.19
SCYL1-211ENST00000529981 NACADO15069 1562 aa28.58■■■□□ 2.17
SCYL1-211ENST00000529981 MYO15BQ96JP2 1530 aa28.57■■■□□ 2.16
SCYL1-211ENST00000529981 RB1CC1Q8TDY2 1594 aa28.52■■■□□ 2.16
SCYL1-211ENST00000529981 DCAF1Q9Y4B6 1507 aa28.52■■■□□ 2.16
SCYL1-211ENST00000529981 DCAF8L2P0C7V8 631 aa28.36■■■□□ 2.13
SCYL1-211ENST00000529981 UNC13AQ9UPW8 1703 aa27.88■■■□□ 2.05
SCYL1-211ENST00000529981 SCRIBQ14160 1630 aa27.74■■■□□ 2.03
SCYL1-211ENST00000529981 BICRAQ9NZM4 1560 aa27.69■■■□□ 2.02
SCYL1-211ENST00000529981 PABPN1Q86U42 306 aaKnown RBP eCLIP27.53■■■□□ 2
SCYL1-211ENST00000529981 SHROOM4Q9ULL8 1493 aa27.49■■□□□ 1.99
SCYL1-211ENST00000529981 EIF4G1Q04637 1599 aaKnown RBP26.91■■□□□ 1.9
SCYL1-211ENST00000529981 DNAJC5BQ9UF47 199 aa26.84■■□□□ 1.89
SCYL1-211ENST00000529981 CC2D2AQ9P2K1 1620 aa26.72■■□□□ 1.87
SCYL1-211ENST00000529981 CECR2Q9BXF3 1484 aa26.71■■□□□ 1.87
SCYL1-211ENST00000529981 BAZ1AQ9NRL2 1556 aaPredicted RBP26.61■■□□□ 1.85
SCYL1-211ENST00000529981 SMARCA4P51532 1647 aa26.61■■□□□ 1.85
SCYL1-211ENST00000529981 MROH2BQ7Z745 1585 aa26.46■■□□□ 1.83
SCYL1-211ENST00000529981 PEG3Q9GZU2 1588 aa26.41■■□□□ 1.82
SCYL1-211ENST00000529981 ATAD2BQ9ULI0 1458 aa26.41■■□□□ 1.82
SCYL1-211ENST00000529981 SMARCA2P51531 1590 aa26.38■■□□□ 1.81
SCYL1-211ENST00000529981 NCAPD3P42695 1498 aa26.37■■□□□ 1.81
SCYL1-211ENST00000529981 HMGXB3Q12766 1538 aa26.29■■□□□ 1.8
SCYL1-211ENST00000529981 RSF1Q96T23 1441 aaPredicted RBP26.25■■□□□ 1.79
SCYL1-211ENST00000529981 WIZO95785 1651 aa26.17■■□□□ 1.78
SCYL1-211ENST00000529981 BAZ1BQ9UIG0 1483 aaKnown RBP26.16■■□□□ 1.78
SCYL1-211ENST00000529981 TOP2AP11388 1531 aaKnown RBP25.96■■□□□ 1.75
SCYL1-211ENST00000529981 LAMC3Q9Y6N6 1575 aa25.62■■□□□ 1.69
SCYL1-211ENST00000529981 CCDC88BA6NC98 1476 aa25.61■■□□□ 1.69
SCYL1-211ENST00000529981 NESP48681 1621 aa25.59■■□□□ 1.69
SCYL1-211ENST00000529981 SUPT5HO00267 1087 aaKnown RBP25.59■■□□□ 1.69
SCYL1-211ENST00000529981 CADPSQ9ULU8 1353 aa25.58■■□□□ 1.69
SCYL1-211ENST00000529981 CFTRP13569 1480 aa25.51■■□□□ 1.67
SCYL1-211ENST00000529981 PDS5BQ9NTI5 1447 aa25.41■■□□□ 1.66
SCYL1-211ENST00000529981 ERCC6Q03468 1493 aa25.36■■□□□ 1.65
SCYL1-211ENST00000529981 PRDM2Q13029 1718 aa25.34■■□□□ 1.65
SCYL1-211ENST00000529981 KIF21AQ7Z4S6 1674 aa25.31■■□□□ 1.64
SCYL1-211ENST00000529981 FANCD2Q9BXW9 1451 aa25.28■■□□□ 1.64
SCYL1-211ENST00000529981 THOC2Q8NI27 1593 aaKnown RBP25.23■■□□□ 1.63
SCYL1-211ENST00000529981 CEP164Q9UPV0 1460 aa25.21■■□□□ 1.63
SCYL1-211ENST00000529981 MRC2Q9UBG0 1479 aa25.15■■□□□ 1.62
SCYL1-211ENST00000529981 CUX2O14529 1486 aa25.11■■□□□ 1.61
SCYL1-211ENST00000529981 WDR62O43379 1518 aa25.1■■□□□ 1.61
SCYL1-211ENST00000529981 URB2Q14146 1524 aaKnown RBP25.02■■□□□ 1.6
SCYL1-211ENST00000529981 ABCC8Q09428 1581 aa24.93■■□□□ 1.58
SCYL1-211ENST00000529981 DNMBPQ6XZF7 1577 aa24.92■■□□□ 1.58
SCYL1-211ENST00000529981 TOPBP1Q92547 1522 aa24.91■■□□□ 1.58
SCYL1-211ENST00000529981 CUX1P39880 1505 aa24.82■■□□□ 1.56
SCYL1-211ENST00000529981 POLA1P09884 1462 aaPredicted RBP24.72■■□□□ 1.55
SCYL1-211ENST00000529981 WRNQ14191 1432 aaPredicted RBP eCLIP24.72■■□□□ 1.55
SCYL1-211ENST00000529981 IFT140Q96RY7 1462 aa24.7■■□□□ 1.55
SCYL1-211ENST00000529981 TOP2BQ02880 1626 aa24.68■■□□□ 1.54
SCYL1-211ENST00000529981 BIVM-ERCC5R4GMW8 1640 aa24.68■■□□□ 1.54
SCYL1-211ENST00000529981 FGD5Q6ZNL6 1462 aa24.68■■□□□ 1.54
SCYL1-211ENST00000529981 SYNJ1O43426 1573 aa24.67■■□□□ 1.54
SCYL1-211ENST00000529981 TARBP1Q13395 1621 aaKnown RBP24.64■■□□□ 1.54
SCYL1-211ENST00000529981 SOGA1O94964 1423 aa24.58■■□□□ 1.53
SCYL1-211ENST00000529981 RAD54L2Q9Y4B4 1467 aa24.57■■□□□ 1.52
SCYL1-211ENST00000529981 ZNF608Q9ULD9 1512 aaPredicted RBP24.55■■□□□ 1.52
SCYL1-211ENST00000529981 WDR97A6NE52 1622 aa24.52■■□□□ 1.52
SCYL1-211ENST00000529981 ABCA10Q8WWZ4 1543 aa24.5■■□□□ 1.51
SCYL1-211ENST00000529981 EIF4G3O43432 1585 aaKnown RBP24.48■■□□□ 1.51
SCYL1-211ENST00000529981 AQRO60306 1485 aaKnown RBP eCLIP24.41■■□□□ 1.54e-7■■■■■ 29.5
SCYL1-211ENST00000529981 TDRD9Q8NDG6 1382 aaKnown RBP24.39■■□□□ 1.49
SCYL1-211ENST00000529981 ABCA5Q8WWZ7 1642 aa24.39■■□□□ 1.49
SCYL1-211ENST00000529981 GAPVD1Q14C86 1478 aa24.32■■□□□ 1.48
SCYL1-211ENST00000529981 GRIN2BQ13224 1484 aa24.3■■□□□ 1.48
SCYL1-211ENST00000529981 PBRM1Q86U86 1689 aa24.26■■□□□ 1.47
SCYL1-211ENST00000529981 MAGI1Q96QZ7 1491 aaPredicted RBP24.23■■□□□ 1.47
SCYL1-211ENST00000529981 SNAPC4Q5SXM2 1469 aa24.22■■□□□ 1.47
SCYL1-211ENST00000529981 ERICH3Q5RHP9 1530 aa24.2■■□□□ 1.47
SCYL1-211ENST00000529981 TRIM41Q8WV44 630 aa24.2■■□□□ 1.46
SCYL1-211ENST00000529981 KIF27Q86VH2 1401 aa24.18■■□□□ 1.46
SCYL1-211ENST00000529981 ADAMTS12P58397 1594 aa24.12■■□□□ 1.45
SCYL1-211ENST00000529981 CHIC1Q5VXU3 224 aa24.12■■□□□ 1.45
SCYL1-211ENST00000529981 SYNJ2O15056 1496 aa24.12■■□□□ 1.45
SCYL1-211ENST00000529981 CHD1O14646 1710 aa24.1■■□□□ 1.45
SCYL1-211ENST00000529981 IGF1RP08069 1367 aa24.07■■□□□ 1.44
SCYL1-211ENST00000529981 FHAD1B1AJZ9 1412 aa24.07■■□□□ 1.44
SCYL1-211ENST00000529981 RUSC2Q8N2Y8 1516 aa24.02■■□□□ 1.44
SCYL1-211ENST00000529981 CUL7Q14999 1698 aa24.02■■□□□ 1.44
SCYL1-211ENST00000529981 OSCARQ8IYS5 282 aa24.01■■□□□ 1.43
SCYL1-211ENST00000529981 DNAJC5Q9H3Z4 198 aa23.99■■□□□ 1.43
SCYL1-211ENST00000529981 GRIN2AQ12879 1464 aa23.99■■□□□ 1.43
SCYL1-211ENST00000529981 CHMP7Q8WUX9 453 aaPredicted RBP23.98■■□□□ 1.43
SCYL1-211ENST00000529981 FBLN2P98095 1184 aa23.95■■□□□ 1.42
SCYL1-211ENST00000529981 EEA1Q15075 1411 aa23.93■■□□□ 1.42
SCYL1-211ENST00000529981 NUP160Q12769 1436 aa23.92■■□□□ 1.42
SCYL1-211ENST00000529981 CLASP1Q7Z460 1538 aa23.91■■□□□ 1.42
SCYL1-211ENST00000529981 CARMIL1Q5VZK9 1371 aa23.91■■□□□ 1.42
SCYL1-211ENST00000529981 CEP170Q5SW79 1584 aa23.86■■□□□ 1.41
SCYL1-211ENST00000529981 PRXQ9BXM0 1461 aa23.84■■□□□ 1.41
SCYL1-211ENST00000529981 RAPGEF2Q9Y4G8 1499 aa23.81■■□□□ 1.4
SCYL1-211ENST00000529981 CSRNP3Q8WYN3 585 aa23.77■■□□□ 1.4
SCYL1-211ENST00000529981 SHROOM2Q13796 1616 aa23.72■■□□□ 1.39
SCYL1-211ENST00000529981 KIAA0586Q9BVV6 1533 aa23.71■■□□□ 1.39
SCYL1-211ENST00000529981 ARHGEF11O15085 1522 aa23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms