RNA–Protein interactions for RNA: ENST00000529958.1

MRPL17-202, Transcript of mitochondrial ribosomal protein L17, humanhuman

TSL 2

Gene MRPL17, Length 1,002 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL17-202ENST00000529958 NISCHQ9Y2I1 1504 aa38.09■■■■□ 3.69
MRPL17-202ENST00000529958 ABCC9O60706 1549 aa34.78■■■■□ 3.16
MRPL17-202ENST00000529958 CCDC180Q9P1Z9 1646 aa34.45■■■■□ 3.11
MRPL17-202ENST00000529958 DNAJC5BQ9UF47 199 aa33.08■■■□□ 2.89
MRPL17-202ENST00000529958 RB1CC1Q8TDY2 1594 aa32.96■■■□□ 2.87
MRPL17-202ENST00000529958 NACADO15069 1562 aa32.63■■■□□ 2.81
MRPL17-202ENST00000529958 UNC13AQ9UPW8 1703 aa32.33■■■□□ 2.77
MRPL17-202ENST00000529958 PABPN1Q86U42 306 aaKnown RBP eCLIP32.26■■■□□ 2.75
MRPL17-202ENST00000529958 DCAF8L2P0C7V8 631 aa32.16■■■□□ 2.74
MRPL17-202ENST00000529958 BICRAQ9NZM4 1560 aa32.07■■■□□ 2.72
MRPL17-202ENST00000529958 MYO15BQ96JP2 1530 aa32.07■■■□□ 2.72
MRPL17-202ENST00000529958 SHROOM4Q9ULL8 1493 aa31.58■■■□□ 2.65
MRPL17-202ENST00000529958 DCAF1Q9Y4B6 1507 aa31.48■■■□□ 2.63
MRPL17-202ENST00000529958 ZCCHC6Q5VYS8 1495 aaKnown RBP31.47■■■□□ 2.63
MRPL17-202ENST00000529958 CC2D2AQ9P2K1 1620 aa31.46■■■□□ 2.63
MRPL17-202ENST00000529958 CECR2Q9BXF3 1484 aa31.4■■■□□ 2.62
MRPL17-202ENST00000529958 EIF4G1Q04637 1599 aaKnown RBP31.28■■■□□ 2.6
MRPL17-202ENST00000529958 SCRIBQ14160 1630 aa31.27■■■□□ 2.6
MRPL17-202ENST00000529958 DNAJC5Q9H3Z4 198 aa30.71■■■□□ 2.51
MRPL17-202ENST00000529958 CUX2O14529 1486 aa30.22■■■□□ 2.43
MRPL17-202ENST00000529958 NCAPD3P42695 1498 aa30.12■■■□□ 2.41
MRPL17-202ENST00000529958 ERCC6Q03468 1493 aa30.04■■■□□ 2.4
MRPL17-202ENST00000529958 ATAD2BQ9ULI0 1458 aa29.95■■■□□ 2.39
MRPL17-202ENST00000529958 HMGXB3Q12766 1538 aa29.87■■■□□ 2.37
MRPL17-202ENST00000529958 SMARCA2P51531 1590 aa29.85■■■□□ 2.37
MRPL17-202ENST00000529958 SMARCA4P51532 1647 aa29.82■■■□□ 2.36
MRPL17-202ENST00000529958 NESP48681 1621 aa29.78■■■□□ 2.36
MRPL17-202ENST00000529958 THOC2Q8NI27 1593 aaKnown RBP29.63■■■□□ 2.33
MRPL17-202ENST00000529958 BAZ1BQ9UIG0 1483 aaKnown RBP29.6■■■□□ 2.33
MRPL17-202ENST00000529958 BAZ1AQ9NRL2 1556 aaPredicted RBP29.59■■■□□ 2.33
MRPL17-202ENST00000529958 PEG3Q9GZU2 1588 aa29.58■■■□□ 2.33
MRPL17-202ENST00000529958 LAMC3Q9Y6N6 1575 aa29.53■■■□□ 2.32
MRPL17-202ENST00000529958 KIF21AQ7Z4S6 1674 aa29.44■■■□□ 2.3
MRPL17-202ENST00000529958 MROH2BQ7Z745 1585 aa29.34■■■□□ 2.29
MRPL17-202ENST00000529958 PDS5BQ9NTI5 1447 aa29.31■■■□□ 2.28
MRPL17-202ENST00000529958 CADPSQ9ULU8 1353 aa29.14■■■□□ 2.26
MRPL17-202ENST00000529958 MRC2Q9UBG0 1479 aa29.11■■■□□ 2.25
MRPL17-202ENST00000529958 WDR62O43379 1518 aa29.1■■■□□ 2.25
MRPL17-202ENST00000529958 TRIM41Q8WV44 630 aa29.06■■■□□ 2.24
MRPL17-202ENST00000529958 WIZO95785 1651 aa28.98■■■□□ 2.23
MRPL17-202ENST00000529958 CEP164Q9UPV0 1460 aa28.89■■■□□ 2.22
MRPL17-202ENST00000529958 FANCD2Q9BXW9 1451 aa28.82■■■□□ 2.2
MRPL17-202ENST00000529958 CFTRP13569 1480 aa28.75■■■□□ 2.19
MRPL17-202ENST00000529958 OSCARQ8IYS5 282 aa28.69■■■□□ 2.18
MRPL17-202ENST00000529958 URB2Q14146 1524 aaKnown RBP28.64■■■□□ 2.17
MRPL17-202ENST00000529958 TOP2AP11388 1531 aaKnown RBP28.57■■■□□ 2.16
MRPL17-202ENST00000529958 RSF1Q96T23 1441 aaPredicted RBP28.53■■■□□ 2.16
MRPL17-202ENST00000529958 PRDM2Q13029 1718 aa28.53■■■□□ 2.16
MRPL17-202ENST00000529958 RIMBP3CA6NJZ7 1639 aa28.47■■■□□ 2.15
MRPL17-202ENST00000529958 RIMBP3BA6NNM3 1639 aa28.47■■■□□ 2.15
MRPL17-202ENST00000529958 RIMBP3Q9UFD9 1639 aa28.47■■■□□ 2.15
MRPL17-202ENST00000529958 ZNF608Q9ULD9 1512 aaPredicted RBP28.34■■■□□ 2.13
MRPL17-202ENST00000529958 IFT140Q96RY7 1462 aa28.34■■■□□ 2.13
MRPL17-202ENST00000529958 ARHGEF11O15085 1522 aa28.29■■■□□ 2.12
MRPL17-202ENST00000529958 TOPBP1Q92547 1522 aa28.24■■■□□ 2.11
MRPL17-202ENST00000529958 CCDC88BA6NC98 1476 aa28.22■■■□□ 2.11
MRPL17-202ENST00000529958 EIF4G3O43432 1585 aaKnown RBP28.2■■■□□ 2.1
MRPL17-202ENST00000529958 ABCC8Q09428 1581 aa28.14■■■□□ 2.1
MRPL17-202ENST00000529958 CHD1O14646 1710 aa28.11■■■□□ 2.09
MRPL17-202ENST00000529958 DNMBPQ6XZF7 1577 aa28.11■■■□□ 2.09
MRPL17-202ENST00000529958 TARBP1Q13395 1621 aaKnown RBP28.07■■■□□ 2.08
MRPL17-202ENST00000529958 CYB5RLQ6IPT4 315 aa28.03■■■□□ 2.08
MRPL17-202ENST00000529958 AQRO60306 1485 aaKnown RBP eCLIP28.01■■■□□ 2.077e-9■■■■■ 56.6
MRPL17-202ENST00000529958 ARAP1Q96P48 1450 aa27.99■■■□□ 2.07
MRPL17-202ENST00000529958 POLA1P09884 1462 aaPredicted RBP27.92■■■□□ 2.06
MRPL17-202ENST00000529958 TRHP20396 242 aaPredicted RBP27.82■■■□□ 2.04
MRPL17-202ENST00000529958 FBLN2P98095 1184 aa27.82■■■□□ 2.04
MRPL17-202ENST00000529958 RAD54L2Q9Y4B4 1467 aa27.8■■■□□ 2.04
MRPL17-202ENST00000529958 CLASP1Q7Z460 1538 aa27.77■■■□□ 2.04
MRPL17-202ENST00000529958 WDR97A6NE52 1622 aa27.76■■■□□ 2.03
MRPL17-202ENST00000529958 SOGA1O94964 1423 aa27.75■■■□□ 2.03
MRPL17-202ENST00000529958 TDRD9Q8NDG6 1382 aaKnown RBP27.73■■■□□ 2.03
MRPL17-202ENST00000529958 SNAPC4Q5SXM2 1469 aa27.71■■■□□ 2.03
MRPL17-202ENST00000529958 SYNJ1O43426 1573 aa27.66■■■□□ 2.02
MRPL17-202ENST00000529958 FGD5Q6ZNL6 1462 aa27.66■■■□□ 2.02
MRPL17-202ENST00000529958 MAGI1Q96QZ7 1491 aaPredicted RBP27.64■■■□□ 2.02
MRPL17-202ENST00000529958 CUX1P39880 1505 aa27.59■■■□□ 2.01
MRPL17-202ENST00000529958 GRIN2BQ13224 1484 aa27.57■■■□□ 2
MRPL17-202ENST00000529958 CHMP7Q8WUX9 453 aaPredicted RBP27.57■■■□□ 2
MRPL17-202ENST00000529958 SYNJ2O15056 1496 aa27.56■■■□□ 2
MRPL17-202ENST00000529958 PBRM1Q86U86 1689 aa27.51■■□□□ 1.99
MRPL17-202ENST00000529958 GAPVD1Q14C86 1478 aa27.44■■□□□ 1.98
MRPL17-202ENST00000529958 ABCA5Q8WWZ7 1642 aa27.38■■□□□ 1.97
MRPL17-202ENST00000529958 ABCA10Q8WWZ4 1543 aa27.36■■□□□ 1.97
MRPL17-202ENST00000529958 AEBP2Q6ZN18 517 aaPredicted RBP27.35■■□□□ 1.97
MRPL17-202ENST00000529958 ERCC6L2Q5T890 1561 aa27.27■■□□□ 1.96
MRPL17-202ENST00000529958 GRIN2AQ12879 1464 aa27.24■■□□□ 1.95
MRPL17-202ENST00000529958 ADAMTS12P58397 1594 aa27.19■■□□□ 1.94
MRPL17-202ENST00000529958 CEP170Q5SW79 1584 aa27.19■■□□□ 1.94
MRPL17-202ENST00000529958 NUP160Q12769 1436 aa27.18■■□□□ 1.94
MRPL17-202ENST00000529958 SHROOM2Q13796 1616 aa27.17■■□□□ 1.94
MRPL17-202ENST00000529958 SUPT5HO00267 1087 aaKnown RBP27.13■■□□□ 1.93
MRPL17-202ENST00000529958 KIF13AQ9H1H9 1805 aa27.09■■□□□ 1.93
MRPL17-202ENST00000529958 WRNQ14191 1432 aaPredicted RBP eCLIP27.09■■□□□ 1.93
MRPL17-202ENST00000529958 BIVM-ERCC5R4GMW8 1640 aa27.07■■□□□ 1.92
MRPL17-202ENST00000529958 FHAD1B1AJZ9 1412 aa27.05■■□□□ 1.92
MRPL17-202ENST00000529958 TOP2BQ02880 1626 aa27.04■■□□□ 1.92
MRPL17-202ENST00000529958 ERICH3Q5RHP9 1530 aa27■■□□□ 1.91
MRPL17-202ENST00000529958 PRG4Q92954 1404 aaPredicted RBP26.9■■□□□ 1.9
MRPL17-202ENST00000529958 JPH4Q96JJ6 628 aa26.84■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms