RNA–Protein interactions for RNA: ENST00000529939.5

MVB12A-211, Transcript of multivesicular body subunit 12A, humanhuman

TSL 3 BASIC

Gene MVB12A, Length 1,091 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MVB12A-211ENST00000529939 NISCHQ9Y2I1 1504 aa42.34■■■■■ 4.37
MVB12A-211ENST00000529939 ABCC9O60706 1549 aa38.25■■■■□ 3.71
MVB12A-211ENST00000529939 CCDC180Q9P1Z9 1646 aa38.09■■■■□ 3.69
MVB12A-211ENST00000529939 RB1CC1Q8TDY2 1594 aa36.35■■■■□ 3.41
MVB12A-211ENST00000529939 DNAJC5BQ9UF47 199 aa36.09■■■■□ 3.37
MVB12A-211ENST00000529939 NACADO15069 1562 aa36.07■■■■□ 3.37
MVB12A-211ENST00000529939 DCAF8L2P0C7V8 631 aa35.71■■■■□ 3.31
MVB12A-211ENST00000529939 PABPN1Q86U42 306 aaKnown RBP eCLIP35.56■■■■□ 3.28
MVB12A-211ENST00000529939 MYO15BQ96JP2 1530 aa35.55■■■■□ 3.28
MVB12A-211ENST00000529939 UNC13AQ9UPW8 1703 aa35.49■■■■□ 3.27
MVB12A-211ENST00000529939 BICRAQ9NZM4 1560 aa35.31■■■■□ 3.24
MVB12A-211ENST00000529939 ZCCHC6Q5VYS8 1495 aaKnown RBP35.06■■■■□ 3.2
MVB12A-211ENST00000529939 DCAF1Q9Y4B6 1507 aa35.01■■■■□ 3.19
MVB12A-211ENST00000529939 SHROOM4Q9ULL8 1493 aa34.87■■■■□ 3.17
MVB12A-211ENST00000529939 SCRIBQ14160 1630 aa34.64■■■■□ 3.14
MVB12A-211ENST00000529939 CC2D2AQ9P2K1 1620 aa34.56■■■■□ 3.12
MVB12A-211ENST00000529939 CECR2Q9BXF3 1484 aa34.5■■■■□ 3.11
MVB12A-211ENST00000529939 EIF4G1Q04637 1599 aaKnown RBP34.45■■■■□ 3.11
MVB12A-211ENST00000529939 NCAPD3P42695 1498 aa33.31■■■□□ 2.92
MVB12A-211ENST00000529939 DNAJC5Q9H3Z4 198 aa33.31■■■□□ 2.92
MVB12A-211ENST00000529939 ATAD2BQ9ULI0 1458 aa33.16■■■□□ 2.9
MVB12A-211ENST00000529939 CUX2O14529 1486 aa33.11■■■□□ 2.89
MVB12A-211ENST00000529939 SMARCA4P51532 1647 aa33.06■■■□□ 2.88
MVB12A-211ENST00000529939 SMARCA2P51531 1590 aa33.05■■■□□ 2.88
MVB12A-211ENST00000529939 HMGXB3Q12766 1538 aa33.04■■■□□ 2.88
MVB12A-211ENST00000529939 ERCC6Q03468 1493 aa33.04■■■□□ 2.88
MVB12A-211ENST00000529939 BAZ1AQ9NRL2 1556 aaPredicted RBP32.88■■■□□ 2.85
MVB12A-211ENST00000529939 NESP48681 1621 aa32.8■■■□□ 2.84
MVB12A-211ENST00000529939 BAZ1BQ9UIG0 1483 aaKnown RBP32.8■■■□□ 2.84
MVB12A-211ENST00000529939 PEG3Q9GZU2 1588 aa32.79■■■□□ 2.84
MVB12A-211ENST00000529939 MROH2BQ7Z745 1585 aa32.61■■■□□ 2.81
MVB12A-211ENST00000529939 LAMC3Q9Y6N6 1575 aa32.58■■■□□ 2.81
MVB12A-211ENST00000529939 THOC2Q8NI27 1593 aaKnown RBP32.54■■■□□ 2.8
MVB12A-211ENST00000529939 PDS5BQ9NTI5 1447 aa32.39■■■□□ 2.78
MVB12A-211ENST00000529939 KIF21AQ7Z4S6 1674 aa32.37■■■□□ 2.77
MVB12A-211ENST00000529939 CADPSQ9ULU8 1353 aa32.27■■■□□ 2.76
MVB12A-211ENST00000529939 WIZO95785 1651 aa32.18■■■□□ 2.74
MVB12A-211ENST00000529939 MRC2Q9UBG0 1479 aa32.12■■■□□ 2.73
MVB12A-211ENST00000529939 WDR62O43379 1518 aa32.07■■■□□ 2.72
MVB12A-211ENST00000529939 CEP164Q9UPV0 1460 aa31.94■■■□□ 2.7
MVB12A-211ENST00000529939 FANCD2Q9BXW9 1451 aa31.89■■■□□ 2.7
MVB12A-211ENST00000529939 CFTRP13569 1480 aa31.87■■■□□ 2.69
MVB12A-211ENST00000529939 RSF1Q96T23 1441 aaPredicted RBP31.86■■■□□ 2.69
MVB12A-211ENST00000529939 TOP2AP11388 1531 aaKnown RBP31.8■■■□□ 2.68
MVB12A-211ENST00000529939 TRIM41Q8WV44 630 aa31.68■■■□□ 2.66
MVB12A-211ENST00000529939 URB2Q14146 1524 aaKnown RBP31.65■■■□□ 2.66
MVB12A-211ENST00000529939 OSCARQ8IYS5 282 aa31.51■■■□□ 2.63
MVB12A-211ENST00000529939 PRDM2Q13029 1718 aa31.49■■■□□ 2.63
MVB12A-211ENST00000529939 CCDC88BA6NC98 1476 aa31.43■■■□□ 2.62
MVB12A-211ENST00000529939 IFT140Q96RY7 1462 aa31.33■■■□□ 2.61
MVB12A-211ENST00000529939 ZNF608Q9ULD9 1512 aaPredicted RBP31.28■■■□□ 2.6
MVB12A-211ENST00000529939 TOPBP1Q92547 1522 aa31.27■■■□□ 2.6
MVB12A-211ENST00000529939 ABCC8Q09428 1581 aa31.2■■■□□ 2.58
MVB12A-211ENST00000529939 DNMBPQ6XZF7 1577 aa31.13■■■□□ 2.57
MVB12A-211ENST00000529939 RIMBP3CA6NJZ7 1639 aa31.13■■■□□ 2.57
MVB12A-211ENST00000529939 RIMBP3BA6NNM3 1639 aa31.13■■■□□ 2.57
MVB12A-211ENST00000529939 RIMBP3Q9UFD9 1639 aa31.13■■■□□ 2.57
MVB12A-211ENST00000529939 EIF4G3O43432 1585 aaKnown RBP31.1■■■□□ 2.57
MVB12A-211ENST00000529939 ARHGEF11O15085 1522 aa31.03■■■□□ 2.56
MVB12A-211ENST00000529939 TARBP1Q13395 1621 aaKnown RBP31.01■■■□□ 2.55
MVB12A-211ENST00000529939 AQRO60306 1485 aaKnown RBP eCLIP30.96■■■□□ 2.557e-8■■■■□ 23.6
MVB12A-211ENST00000529939 POLA1P09884 1462 aaPredicted RBP30.94■■■□□ 2.54
MVB12A-211ENST00000529939 CHD1O14646 1710 aa30.88■■■□□ 2.53
MVB12A-211ENST00000529939 RAD54L2Q9Y4B4 1467 aa30.81■■■□□ 2.52
MVB12A-211ENST00000529939 SOGA1O94964 1423 aa30.78■■■□□ 2.52
MVB12A-211ENST00000529939 CYB5RLQ6IPT4 315 aa30.77■■■□□ 2.52
MVB12A-211ENST00000529939 FBLN2P98095 1184 aa30.74■■■□□ 2.51
MVB12A-211ENST00000529939 TDRD9Q8NDG6 1382 aaKnown RBP30.73■■■□□ 2.51
MVB12A-211ENST00000529939 ARAP1Q96P48 1450 aa30.72■■■□□ 2.51
MVB12A-211ENST00000529939 WDR97A6NE52 1622 aa30.72■■■□□ 2.51
MVB12A-211ENST00000529939 FGD5Q6ZNL6 1462 aa30.7■■■□□ 2.51
MVB12A-211ENST00000529939 SNAPC4Q5SXM2 1469 aa30.65■■■□□ 2.5
MVB12A-211ENST00000529939 CUX1P39880 1505 aa30.65■■■□□ 2.5
MVB12A-211ENST00000529939 MAGI1Q96QZ7 1491 aaPredicted RBP30.59■■■□□ 2.49
MVB12A-211ENST00000529939 CLASP1Q7Z460 1538 aa30.57■■■□□ 2.49
MVB12A-211ENST00000529939 GRIN2BQ13224 1484 aa30.55■■■□□ 2.48
MVB12A-211ENST00000529939 CHMP7Q8WUX9 453 aaPredicted RBP30.52■■■□□ 2.48
MVB12A-211ENST00000529939 SYNJ1O43426 1573 aa30.52■■■□□ 2.48
MVB12A-211ENST00000529939 SYNJ2O15056 1496 aa30.48■■■□□ 2.47
MVB12A-211ENST00000529939 TRHP20396 242 aaPredicted RBP30.47■■■□□ 2.47
MVB12A-211ENST00000529939 GAPVD1Q14C86 1478 aa30.4■■■□□ 2.46
MVB12A-211ENST00000529939 PBRM1Q86U86 1689 aa30.39■■■□□ 2.45
MVB12A-211ENST00000529939 ABCA10Q8WWZ4 1543 aa30.37■■■□□ 2.45
MVB12A-211ENST00000529939 ABCA5Q8WWZ7 1642 aa30.34■■■□□ 2.45
MVB12A-211ENST00000529939 SUPT5HO00267 1087 aaKnown RBP30.2■■■□□ 2.43
MVB12A-211ENST00000529939 WRNQ14191 1432 aaPredicted RBP eCLIP30.19■■■□□ 2.429e-6■■■■■ 50.1
MVB12A-211ENST00000529939 GRIN2AQ12879 1464 aa30.16■■■□□ 2.42
MVB12A-211ENST00000529939 ADAMTS12P58397 1594 aa30.12■■■□□ 2.41
MVB12A-211ENST00000529939 TOP2BQ02880 1626 aa30.11■■■□□ 2.41
MVB12A-211ENST00000529939 BIVM-ERCC5R4GMW8 1640 aa30.11■■■□□ 2.41
MVB12A-211ENST00000529939 NUP160Q12769 1436 aa30.09■■■□□ 2.41
MVB12A-211ENST00000529939 CEP170Q5SW79 1584 aa30.06■■■□□ 2.4
MVB12A-211ENST00000529939 ERCC6L2Q5T890 1561 aa30.06■■■□□ 2.4
MVB12A-211ENST00000529939 FHAD1B1AJZ9 1412 aa30.03■■■□□ 2.4
MVB12A-211ENST00000529939 ERICH3Q5RHP9 1530 aa29.98■■■□□ 2.39
MVB12A-211ENST00000529939 SHROOM2Q13796 1616 aa29.98■■■□□ 2.39
MVB12A-211ENST00000529939 PRG4Q92954 1404 aaPredicted RBP29.78■■■□□ 2.36
MVB12A-211ENST00000529939 AEBP2Q6ZN18 517 aaPredicted RBP29.73■■■□□ 2.35
MVB12A-211ENST00000529939 JPH4Q96JJ6 628 aa29.73■■■□□ 2.35
MVB12A-211ENST00000529939 RUSC2Q8N2Y8 1516 aa29.71■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms