RNA–Protein interactions for RNA: ENST00000529896.1

SLC43A3-216, Transcript of solute carrier family 43 member 3, humanhuman

TSL 4

Gene SLC43A3, Length 494 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC43A3-216ENST00000529896 NISCHQ9Y2I1 1504 aa34.25■■■■□ 3.07
SLC43A3-216ENST00000529896 ABCC9O60706 1549 aa31.48■■■□□ 2.63
SLC43A3-216ENST00000529896 CCDC180Q9P1Z9 1646 aa30.93■■■□□ 2.54
SLC43A3-216ENST00000529896 DNAJC5BQ9UF47 199 aa29.95■■■□□ 2.39
SLC43A3-216ENST00000529896 RB1CC1Q8TDY2 1594 aa29.75■■■□□ 2.35
SLC43A3-216ENST00000529896 NACADO15069 1562 aa29.41■■■□□ 2.3
SLC43A3-216ENST00000529896 DCAF8L2P0C7V8 631 aa29.29■■■□□ 2.28
SLC43A3-216ENST00000529896 PABPN1Q86U42 306 aaKnown RBP eCLIP29.27■■■□□ 2.28
SLC43A3-216ENST00000529896 UNC13AQ9UPW8 1703 aa28.94■■■□□ 2.22
SLC43A3-216ENST00000529896 MYO15BQ96JP2 1530 aa28.83■■■□□ 2.21
SLC43A3-216ENST00000529896 BICRAQ9NZM4 1560 aa28.81■■■□□ 2.2
SLC43A3-216ENST00000529896 SHROOM4Q9ULL8 1493 aa28.46■■■□□ 2.15
SLC43A3-216ENST00000529896 CECR2Q9BXF3 1484 aa28.43■■■□□ 2.14
SLC43A3-216ENST00000529896 CC2D2AQ9P2K1 1620 aa28.38■■■□□ 2.13
SLC43A3-216ENST00000529896 DCAF1Q9Y4B6 1507 aa28.26■■■□□ 2.11
SLC43A3-216ENST00000529896 ZCCHC6Q5VYS8 1495 aaKnown RBP28.26■■■□□ 2.11
SLC43A3-216ENST00000529896 EIF4G1Q04637 1599 aaKnown RBP28.2■■■□□ 2.1
SLC43A3-216ENST00000529896 SCRIBQ14160 1630 aa28.18■■■□□ 2.1
SLC43A3-216ENST00000529896 DNAJC5Q9H3Z4 198 aa27.95■■■□□ 2.06
SLC43A3-216ENST00000529896 CUX2O14529 1486 aa27.36■■□□□ 1.97
SLC43A3-216ENST00000529896 ERCC6Q03468 1493 aa27.28■■□□□ 1.96
SLC43A3-216ENST00000529896 NCAPD3P42695 1498 aa27.16■■□□□ 1.94
SLC43A3-216ENST00000529896 ATAD2BQ9ULI0 1458 aa27■■□□□ 1.91
SLC43A3-216ENST00000529896 SMARCA2P51531 1590 aa26.92■■□□□ 1.9
SLC43A3-216ENST00000529896 HMGXB3Q12766 1538 aa26.89■■□□□ 1.89
SLC43A3-216ENST00000529896 NESP48681 1621 aa26.86■■□□□ 1.89
SLC43A3-216ENST00000529896 SMARCA4P51532 1647 aa26.81■■□□□ 1.88
SLC43A3-216ENST00000529896 BAZ1BQ9UIG0 1483 aaKnown RBP26.74■■□□□ 1.87
SLC43A3-216ENST00000529896 THOC2Q8NI27 1593 aaKnown RBP26.66■■□□□ 1.86
SLC43A3-216ENST00000529896 BAZ1AQ9NRL2 1556 aaPredicted RBP26.65■■□□□ 1.86
SLC43A3-216ENST00000529896 LAMC3Q9Y6N6 1575 aa26.63■■□□□ 1.85
SLC43A3-216ENST00000529896 TRIM41Q8WV44 630 aa26.56■■□□□ 1.84
SLC43A3-216ENST00000529896 PDS5BQ9NTI5 1447 aa26.56■■□□□ 1.84
SLC43A3-216ENST00000529896 PEG3Q9GZU2 1588 aa26.54■■□□□ 1.84
SLC43A3-216ENST00000529896 KIF21AQ7Z4S6 1674 aa26.47■■□□□ 1.83
SLC43A3-216ENST00000529896 MROH2BQ7Z745 1585 aa26.37■■□□□ 1.81
SLC43A3-216ENST00000529896 CADPSQ9ULU8 1353 aa26.34■■□□□ 1.81
SLC43A3-216ENST00000529896 MRC2Q9UBG0 1479 aa26.3■■□□□ 1.8
SLC43A3-216ENST00000529896 WDR62O43379 1518 aa26.21■■□□□ 1.79
SLC43A3-216ENST00000529896 CEP164Q9UPV0 1460 aa26.11■■□□□ 1.77
SLC43A3-216ENST00000529896 OSCARQ8IYS5 282 aa26.1■■□□□ 1.77
SLC43A3-216ENST00000529896 FANCD2Q9BXW9 1451 aa26.03■■□□□ 1.76
SLC43A3-216ENST00000529896 WIZO95785 1651 aa26.02■■□□□ 1.76
SLC43A3-216ENST00000529896 CFTRP13569 1480 aa25.9■■□□□ 1.74
SLC43A3-216ENST00000529896 URB2Q14146 1524 aaKnown RBP25.8■■□□□ 1.72
SLC43A3-216ENST00000529896 RIMBP3CA6NJZ7 1639 aa25.7■■□□□ 1.7
SLC43A3-216ENST00000529896 RIMBP3BA6NNM3 1639 aa25.7■■□□□ 1.7
SLC43A3-216ENST00000529896 RIMBP3Q9UFD9 1639 aa25.7■■□□□ 1.7
SLC43A3-216ENST00000529896 TOP2AP11388 1531 aaKnown RBP25.68■■□□□ 1.7
SLC43A3-216ENST00000529896 RSF1Q96T23 1441 aaPredicted RBP25.66■■□□□ 1.7
SLC43A3-216ENST00000529896 IFT140Q96RY7 1462 aa25.61■■□□□ 1.69
SLC43A3-216ENST00000529896 ARHGEF11O15085 1522 aa25.58■■□□□ 1.68
SLC43A3-216ENST00000529896 ZNF608Q9ULD9 1512 aaPredicted RBP25.57■■□□□ 1.68
SLC43A3-216ENST00000529896 PRDM2Q13029 1718 aa25.52■■□□□ 1.68
SLC43A3-216ENST00000529896 CYB5RLQ6IPT4 315 aa25.52■■□□□ 1.68
SLC43A3-216ENST00000529896 TRHP20396 242 aaPredicted RBP25.45■■□□□ 1.66
SLC43A3-216ENST00000529896 TOPBP1Q92547 1522 aa25.45■■□□□ 1.66
SLC43A3-216ENST00000529896 ABCC8Q09428 1581 aa25.43■■□□□ 1.66
SLC43A3-216ENST00000529896 CCDC88BA6NC98 1476 aa25.41■■□□□ 1.66
SLC43A3-216ENST00000529896 EIF4G3O43432 1585 aaKnown RBP25.39■■□□□ 1.65
SLC43A3-216ENST00000529896 FBLN2P98095 1184 aa25.35■■□□□ 1.65
SLC43A3-216ENST00000529896 DNMBPQ6XZF7 1577 aa25.31■■□□□ 1.64
SLC43A3-216ENST00000529896 AQRO60306 1485 aaKnown RBP eCLIP25.31■■□□□ 1.641e-9■■■■□ 26.1
SLC43A3-216ENST00000529896 CHD1O14646 1710 aa25.28■■□□□ 1.64
SLC43A3-216ENST00000529896 ARAP1Q96P48 1450 aa25.28■■□□□ 1.64
SLC43A3-216ENST00000529896 TARBP1Q13395 1621 aaKnown RBP25.23■■□□□ 1.63
SLC43A3-216ENST00000529896 POLA1P09884 1462 aaPredicted RBP25.15■■□□□ 1.62
SLC43A3-216ENST00000529896 AEBP2Q6ZN18 517 aaPredicted RBP25.12■■□□□ 1.61
SLC43A3-216ENST00000529896 SOGA1O94964 1423 aa25.1■■□□□ 1.61
SLC43A3-216ENST00000529896 TDRD9Q8NDG6 1382 aaKnown RBP25.09■■□□□ 1.61
SLC43A3-216ENST00000529896 RAD54L2Q9Y4B4 1467 aa25.09■■□□□ 1.61
SLC43A3-216ENST00000529896 CHMP7Q8WUX9 453 aaPredicted RBP25.08■■□□□ 1.61
SLC43A3-216ENST00000529896 SNAPC4Q5SXM2 1469 aa25.02■■□□□ 1.6
SLC43A3-216ENST00000529896 SYNJ1O43426 1573 aa25■■□□□ 1.59
SLC43A3-216ENST00000529896 CLASP1Q7Z460 1538 aa24.99■■□□□ 1.59
SLC43A3-216ENST00000529896 WDR97A6NE52 1622 aa24.98■■□□□ 1.59
SLC43A3-216ENST00000529896 MAGI1Q96QZ7 1491 aaPredicted RBP24.96■■□□□ 1.59
SLC43A3-216ENST00000529896 FGD5Q6ZNL6 1462 aa24.94■■□□□ 1.58
SLC43A3-216ENST00000529896 GRIN2BQ13224 1484 aa24.92■■□□□ 1.58
SLC43A3-216ENST00000529896 SYNJ2O15056 1496 aa24.89■■□□□ 1.57
SLC43A3-216ENST00000529896 GAPVD1Q14C86 1478 aa24.83■■□□□ 1.56
SLC43A3-216ENST00000529896 CUX1P39880 1505 aa24.8■■□□□ 1.56
SLC43A3-216ENST00000529896 PBRM1Q86U86 1689 aa24.7■■□□□ 1.54
SLC43A3-216ENST00000529896 ABCA10Q8WWZ4 1543 aa24.63■■□□□ 1.53
SLC43A3-216ENST00000529896 ABCA5Q8WWZ7 1642 aa24.59■■□□□ 1.53
SLC43A3-216ENST00000529896 GRIN2AQ12879 1464 aa24.57■■□□□ 1.52
SLC43A3-216ENST00000529896 ERCC6L2Q5T890 1561 aa24.54■■□□□ 1.52
SLC43A3-216ENST00000529896 CEP170Q5SW79 1584 aa24.51■■□□□ 1.51
SLC43A3-216ENST00000529896 NUP160Q12769 1436 aa24.49■■□□□ 1.51
SLC43A3-216ENST00000529896 WRNQ14191 1432 aaPredicted RBP eCLIP24.49■■□□□ 1.51
SLC43A3-216ENST00000529896 ADAMTS12P58397 1594 aa24.45■■□□□ 1.5
SLC43A3-216ENST00000529896 FHAD1B1AJZ9 1412 aa24.44■■□□□ 1.5
SLC43A3-216ENST00000529896 SHROOM2Q13796 1616 aa24.4■■□□□ 1.5
SLC43A3-216ENST00000529896 PRG4Q92954 1404 aaPredicted RBP24.35■■□□□ 1.49
SLC43A3-216ENST00000529896 NPM1P06748 294 aaKnown RBP eCLIP24.35■■□□□ 1.49
SLC43A3-216ENST00000529896 KIF13AQ9H1H9 1805 aa24.33■■□□□ 1.49
SLC43A3-216ENST00000529896 JPH4Q96JJ6 628 aa24.33■■□□□ 1.49
SLC43A3-216ENST00000529896 ERICH3Q5RHP9 1530 aa24.32■■□□□ 1.48
SLC43A3-216ENST00000529896 FAM69CQ0P6D2 419 aa24.32■■□□□ 1.48
SLC43A3-216ENST00000529896 TOP2BQ02880 1626 aa24.28■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms