RNA–Protein interactions for RNA: ENST00000529693.1

PUF60-214, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 2

Gene PUF60, Length 684 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-214ENST00000529693 NISCHQ9Y2I1 1504 aa41.79■■■■■ 4.28
PUF60-214ENST00000529693 CCDC180Q9P1Z9 1646 aa36.99■■■■□ 3.51
PUF60-214ENST00000529693 ABCC9O60706 1549 aa35.79■■■■□ 3.32
PUF60-214ENST00000529693 ZCCHC6Q5VYS8 1495 aaKnown RBP34.9■■■■□ 3.18
PUF60-214ENST00000529693 DCAF8L2P0C7V8 631 aa34.71■■■■□ 3.15
PUF60-214ENST00000529693 NACADO15069 1562 aa34.63■■■■□ 3.13
PUF60-214ENST00000529693 RB1CC1Q8TDY2 1594 aa34.57■■■■□ 3.13
PUF60-214ENST00000529693 DCAF1Q9Y4B6 1507 aa34.56■■■■□ 3.12
PUF60-214ENST00000529693 MYO15BQ96JP2 1530 aa34.54■■■■□ 3.12
PUF60-214ENST00000529693 UNC13AQ9UPW8 1703 aa33.97■■■■□ 3.03
PUF60-214ENST00000529693 SCRIBQ14160 1630 aa33.81■■■■□ 3
PUF60-214ENST00000529693 BICRAQ9NZM4 1560 aa33.61■■■□□ 2.97
PUF60-214ENST00000529693 PABPN1Q86U42 306 aaKnown RBP eCLIP33.51■■■□□ 2.953e-7■□□□□ 10.7
PUF60-214ENST00000529693 SHROOM4Q9ULL8 1493 aa33.28■■■□□ 2.92
PUF60-214ENST00000529693 EIF4G1Q04637 1599 aaKnown RBP32.62■■■□□ 2.81
PUF60-214ENST00000529693 CECR2Q9BXF3 1484 aa32.56■■■□□ 2.8
PUF60-214ENST00000529693 DNAJC5BQ9UF47 199 aa32.53■■■□□ 2.8
PUF60-214ENST00000529693 CC2D2AQ9P2K1 1620 aa32.42■■■□□ 2.78
PUF60-214ENST00000529693 SMARCA4P51532 1647 aa32.37■■■□□ 2.77
PUF60-214ENST00000529693 BAZ1AQ9NRL2 1556 aaPredicted RBP32.33■■■□□ 2.77
PUF60-214ENST00000529693 MROH2BQ7Z745 1585 aa32.25■■■□□ 2.75
PUF60-214ENST00000529693 ATAD2BQ9ULI0 1458 aa32.05■■■□□ 2.72
PUF60-214ENST00000529693 PEG3Q9GZU2 1588 aa32.02■■■□□ 2.72
PUF60-214ENST00000529693 SMARCA2P51531 1590 aa32.01■■■□□ 2.71
PUF60-214ENST00000529693 RSF1Q96T23 1441 aaPredicted RBP32■■■□□ 2.71
PUF60-214ENST00000529693 WIZO95785 1651 aa31.96■■■□□ 2.71
PUF60-214ENST00000529693 NCAPD3P42695 1498 aa31.95■■■□□ 2.7
PUF60-214ENST00000529693 HMGXB3Q12766 1538 aa31.84■■■□□ 2.69
PUF60-214ENST00000529693 BAZ1BQ9UIG0 1483 aaKnown RBP31.78■■■□□ 2.68
PUF60-214ENST00000529693 TOP2AP11388 1531 aaKnown RBP31.57■■■□□ 2.64
PUF60-214ENST00000529693 SUPT5HO00267 1087 aaKnown RBP31.49■■■□□ 2.63
PUF60-214ENST00000529693 CCDC88BA6NC98 1476 aa31.21■■■□□ 2.59
PUF60-214ENST00000529693 NESP48681 1621 aa31.13■■■□□ 2.57
PUF60-214ENST00000529693 LAMC3Q9Y6N6 1575 aa31.05■■■□□ 2.56
PUF60-214ENST00000529693 CADPSQ9ULU8 1353 aa31.04■■■□□ 2.56
PUF60-214ENST00000529693 CFTRP13569 1480 aa30.95■■■□□ 2.55
PUF60-214ENST00000529693 PRDM2Q13029 1718 aa30.86■■■□□ 2.53
PUF60-214ENST00000529693 KIF21AQ7Z4S6 1674 aa30.82■■■□□ 2.52
PUF60-214ENST00000529693 PDS5BQ9NTI5 1447 aa30.78■■■□□ 2.52
PUF60-214ENST00000529693 ERCC6Q03468 1493 aa30.76■■■□□ 2.51
PUF60-214ENST00000529693 FANCD2Q9BXW9 1451 aa30.7■■■□□ 2.5
PUF60-214ENST00000529693 CEP164Q9UPV0 1460 aa30.6■■■□□ 2.49
PUF60-214ENST00000529693 THOC2Q8NI27 1593 aaKnown RBP30.57■■■□□ 2.48
PUF60-214ENST00000529693 MRC2Q9UBG0 1479 aa30.48■■■□□ 2.47
PUF60-214ENST00000529693 URB2Q14146 1524 aaKnown RBP30.41■■■□□ 2.46
PUF60-214ENST00000529693 WDR62O43379 1518 aa30.39■■■□□ 2.46
PUF60-214ENST00000529693 CUX2O14529 1486 aa30.28■■■□□ 2.44
PUF60-214ENST00000529693 TOPBP1Q92547 1522 aa30.27■■■□□ 2.44
PUF60-214ENST00000529693 DNMBPQ6XZF7 1577 aa30.27■■■□□ 2.44
PUF60-214ENST00000529693 ABCC8Q09428 1581 aa30.24■■■□□ 2.43
PUF60-214ENST00000529693 CUX1P39880 1505 aa30.22■■■□□ 2.43
PUF60-214ENST00000529693 WRNQ14191 1432 aaPredicted RBP eCLIP30.13■■■□□ 2.41
PUF60-214ENST00000529693 SYNJ1O43426 1573 aa30.11■■■□□ 2.41
PUF60-214ENST00000529693 BIVM-ERCC5R4GMW8 1640 aa30.08■■■□□ 2.41
PUF60-214ENST00000529693 TOP2BQ02880 1626 aa30.06■■■□□ 2.4
PUF60-214ENST00000529693 POLA1P09884 1462 aaPredicted RBP30.05■■■□□ 2.4
PUF60-214ENST00000529693 FGD5Q6ZNL6 1462 aa30.03■■■□□ 2.4
PUF60-214ENST00000529693 TARBP1Q13395 1621 aaKnown RBP29.95■■■□□ 2.38
PUF60-214ENST00000529693 IFT140Q96RY7 1462 aa29.93■■■□□ 2.38
PUF60-214ENST00000529693 RAD54L2Q9Y4B4 1467 aa29.93■■■□□ 2.38
PUF60-214ENST00000529693 SOGA1O94964 1423 aa29.9■■■□□ 2.38
PUF60-214ENST00000529693 ZNF608Q9ULD9 1512 aaPredicted RBP29.84■■■□□ 2.37
PUF60-214ENST00000529693 WDR97A6NE52 1622 aa29.83■■■□□ 2.37
PUF60-214ENST00000529693 ABCA10Q8WWZ4 1543 aa29.75■■■□□ 2.35
PUF60-214ENST00000529693 EIF4G3O43432 1585 aaKnown RBP29.73■■■□□ 2.35
PUF60-214ENST00000529693 AQRO60306 1485 aaKnown RBP eCLIP29.7■■■□□ 2.35
PUF60-214ENST00000529693 TDRD9Q8NDG6 1382 aaKnown RBP29.7■■■□□ 2.35
PUF60-214ENST00000529693 TRIM41Q8WV44 630 aa29.67■■■□□ 2.34
PUF60-214ENST00000529693 CHIC1Q5VXU3 224 aa29.64■■■□□ 2.34
PUF60-214ENST00000529693 ABCA5Q8WWZ7 1642 aa29.63■■■□□ 2.33
PUF60-214ENST00000529693 PBRM1Q86U86 1689 aa29.56■■■□□ 2.32
PUF60-214ENST00000529693 GAPVD1Q14C86 1478 aa29.56■■■□□ 2.32
PUF60-214ENST00000529693 GRIN2BQ13224 1484 aa29.49■■■□□ 2.31
PUF60-214ENST00000529693 KIF27Q86VH2 1401 aa29.44■■■□□ 2.3
PUF60-214ENST00000529693 SNAPC4Q5SXM2 1469 aa29.42■■■□□ 2.3
PUF60-214ENST00000529693 RUSC2Q8N2Y8 1516 aa29.42■■■□□ 2.3
PUF60-214ENST00000529693 ERICH3Q5RHP9 1530 aa29.39■■■□□ 2.3
PUF60-214ENST00000529693 MAGI1Q96QZ7 1491 aaPredicted RBP29.36■■■□□ 2.29
PUF60-214ENST00000529693 CHD1O14646 1710 aa29.34■■■□□ 2.29
PUF60-214ENST00000529693 IGF1RP08069 1367 aa29.31■■■□□ 2.28
PUF60-214ENST00000529693 ADAMTS12P58397 1594 aa29.3■■■□□ 2.28
PUF60-214ENST00000529693 SYNJ2O15056 1496 aa29.25■■■□□ 2.27
PUF60-214ENST00000529693 CUL7Q14999 1698 aa29.22■■■□□ 2.27
PUF60-214ENST00000529693 FHAD1B1AJZ9 1412 aa29.22■■■□□ 2.27
PUF60-214ENST00000529693 FBLN2P98095 1184 aa29.21■■■□□ 2.27
PUF60-214ENST00000529693 CHMP7Q8WUX9 453 aaPredicted RBP29.18■■■□□ 2.26
PUF60-214ENST00000529693 GRIN2AQ12879 1464 aa29.13■■■□□ 2.25
PUF60-214ENST00000529693 CARMIL1Q5VZK9 1371 aa29.13■■■□□ 2.25
PUF60-214ENST00000529693 EEA1Q15075 1411 aa29.12■■■□□ 2.25
PUF60-214ENST00000529693 FAM9AQ8IZU1 332 aaPredicted RBP29.11■■■□□ 2.25
PUF60-214ENST00000529693 OSCARQ8IYS5 282 aa29.1■■■□□ 2.25
PUF60-214ENST00000529693 CSRNP3Q8WYN3 585 aa29.06■■■□□ 2.24
PUF60-214ENST00000529693 CEP170Q5SW79 1584 aa29.02■■■□□ 2.24
PUF60-214ENST00000529693 PRXQ9BXM0 1461 aa29.02■■■□□ 2.24
PUF60-214ENST00000529693 RAPGEF2Q9Y4G8 1499 aa29■■■□□ 2.23
PUF60-214ENST00000529693 NUP160Q12769 1436 aa28.98■■■□□ 2.23
PUF60-214ENST00000529693 CLASP1Q7Z460 1538 aa28.96■■■□□ 2.23
PUF60-214ENST00000529693 DNAJC5Q9H3Z4 198 aa28.9■■■□□ 2.22
PUF60-214ENST00000529693 KIF21BO75037 1637 aa28.87■■■□□ 2.21
PUF60-214ENST00000529693 CTTNBP2Q8WZ74 1663 aa28.8■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms