RNA–Protein interactions for RNA: ENST00000529494.5

SLC43A3-213, Transcript of solute carrier family 43 member 3, humanhuman

TSL 4

Gene SLC43A3, Length 560 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC43A3-213ENST00000529494 NISCHQ9Y2I1 1504 aa46.12■■■■■ 4.97
SLC43A3-213ENST00000529494 CCDC180Q9P1Z9 1646 aa40.77■■■■■ 4.12
SLC43A3-213ENST00000529494 ABCC9O60706 1549 aa39.21■■■■□ 3.87
SLC43A3-213ENST00000529494 ZCCHC6Q5VYS8 1495 aaKnown RBP38.56■■■■□ 3.76
SLC43A3-213ENST00000529494 DCAF1Q9Y4B6 1507 aa38.27■■■■□ 3.72
SLC43A3-213ENST00000529494 MYO15BQ96JP2 1530 aa38.23■■■■□ 3.71
SLC43A3-213ENST00000529494 NACADO15069 1562 aa38.19■■■■□ 3.7
SLC43A3-213ENST00000529494 DCAF8L2P0C7V8 631 aa38.13■■■■□ 3.69
SLC43A3-213ENST00000529494 RB1CC1Q8TDY2 1594 aa38.06■■■■□ 3.68
SLC43A3-213ENST00000529494 SCRIBQ14160 1630 aa37.15■■■■□ 3.54
SLC43A3-213ENST00000529494 UNC13AQ9UPW8 1703 aa37.1■■■■□ 3.53
SLC43A3-213ENST00000529494 BICRAQ9NZM4 1560 aa36.87■■■■□ 3.49
SLC43A3-213ENST00000529494 PABPN1Q86U42 306 aaKnown RBP eCLIP36.7■■■■□ 3.47
SLC43A3-213ENST00000529494 SHROOM4Q9ULL8 1493 aa36.67■■■■□ 3.46
SLC43A3-213ENST00000529494 EIF4G1Q04637 1599 aaKnown RBP35.85■■■■□ 3.33
SLC43A3-213ENST00000529494 CECR2Q9BXF3 1484 aa35.8■■■■□ 3.32
SLC43A3-213ENST00000529494 BAZ1AQ9NRL2 1556 aaPredicted RBP35.72■■■■□ 3.31
SLC43A3-213ENST00000529494 SMARCA4P51532 1647 aa35.65■■■■□ 3.3
SLC43A3-213ENST00000529494 CC2D2AQ9P2K1 1620 aa35.53■■■■□ 3.28
SLC43A3-213ENST00000529494 MROH2BQ7Z745 1585 aa35.51■■■■□ 3.28
SLC43A3-213ENST00000529494 DNAJC5BQ9UF47 199 aa35.42■■■■□ 3.26
SLC43A3-213ENST00000529494 PEG3Q9GZU2 1588 aa35.35■■■■□ 3.25
SLC43A3-213ENST00000529494 RSF1Q96T23 1441 aaPredicted RBP35.34■■■■□ 3.25
SLC43A3-213ENST00000529494 SMARCA2P51531 1590 aa35.33■■■■□ 3.25
SLC43A3-213ENST00000529494 ATAD2BQ9ULI0 1458 aa35.31■■■■□ 3.24
SLC43A3-213ENST00000529494 NCAPD3P42695 1498 aa35.23■■■■□ 3.23
SLC43A3-213ENST00000529494 HMGXB3Q12766 1538 aa35.13■■■■□ 3.21
SLC43A3-213ENST00000529494 WIZO95785 1651 aa35.12■■■■□ 3.21
SLC43A3-213ENST00000529494 BAZ1BQ9UIG0 1483 aaKnown RBP35.04■■■■□ 3.2
SLC43A3-213ENST00000529494 TOP2AP11388 1531 aaKnown RBP34.87■■■■□ 3.17
SLC43A3-213ENST00000529494 SUPT5HO00267 1087 aaKnown RBP34.78■■■■□ 3.16
SLC43A3-213ENST00000529494 CCDC88BA6NC98 1476 aa34.42■■■■□ 3.1
SLC43A3-213ENST00000529494 CADPSQ9ULU8 1353 aa34.22■■■■□ 3.07
SLC43A3-213ENST00000529494 LAMC3Q9Y6N6 1575 aa34.2■■■■□ 3.07
SLC43A3-213ENST00000529494 CFTRP13569 1480 aa34.15■■■■□ 3.06
SLC43A3-213ENST00000529494 NESP48681 1621 aa34.1■■■■□ 3.05
SLC43A3-213ENST00000529494 PDS5BQ9NTI5 1447 aa33.95■■■■□ 3.02
SLC43A3-213ENST00000529494 PRDM2Q13029 1718 aa33.89■■■■□ 3.02
SLC43A3-213ENST00000529494 FANCD2Q9BXW9 1451 aa33.8■■■■□ 3
SLC43A3-213ENST00000529494 ERCC6Q03468 1493 aa33.78■■■■□ 3
SLC43A3-213ENST00000529494 CEP164Q9UPV0 1460 aa33.72■■■□□ 2.99
SLC43A3-213ENST00000529494 KIF21AQ7Z4S6 1674 aa33.71■■■□□ 2.99
SLC43A3-213ENST00000529494 MRC2Q9UBG0 1479 aa33.55■■■□□ 2.96
SLC43A3-213ENST00000529494 THOC2Q8NI27 1593 aaKnown RBP33.52■■■□□ 2.96
SLC43A3-213ENST00000529494 WDR62O43379 1518 aa33.43■■■□□ 2.94
SLC43A3-213ENST00000529494 URB2Q14146 1524 aaKnown RBP33.42■■■□□ 2.94
SLC43A3-213ENST00000529494 ABCC8Q09428 1581 aa33.42■■■□□ 2.94
SLC43A3-213ENST00000529494 DNMBPQ6XZF7 1577 aa33.36■■■□□ 2.93
SLC43A3-213ENST00000529494 TOPBP1Q92547 1522 aa33.33■■■□□ 2.93
SLC43A3-213ENST00000529494 WRNQ14191 1432 aaPredicted RBP eCLIP33.31■■■□□ 2.92
SLC43A3-213ENST00000529494 CUX1P39880 1505 aa33.29■■■□□ 2.92
SLC43A3-213ENST00000529494 CUX2O14529 1486 aa33.28■■■□□ 2.92
SLC43A3-213ENST00000529494 TOP2BQ02880 1626 aa33.19■■■□□ 2.9
SLC43A3-213ENST00000529494 SYNJ1O43426 1573 aa33.17■■■□□ 2.9
SLC43A3-213ENST00000529494 BIVM-ERCC5R4GMW8 1640 aa33.17■■■□□ 2.9
SLC43A3-213ENST00000529494 POLA1P09884 1462 aaPredicted RBP33.09■■■□□ 2.89
SLC43A3-213ENST00000529494 FGD5Q6ZNL6 1462 aa33.08■■■□□ 2.89
SLC43A3-213ENST00000529494 IFT140Q96RY7 1462 aa33■■■□□ 2.87
SLC43A3-213ENST00000529494 SOGA1O94964 1423 aa32.95■■■□□ 2.87
SLC43A3-213ENST00000529494 TARBP1Q13395 1621 aaKnown RBP32.92■■■□□ 2.86
SLC43A3-213ENST00000529494 RAD54L2Q9Y4B4 1467 aa32.88■■■□□ 2.85
SLC43A3-213ENST00000529494 TRIM41Q8WV44 630 aa32.88■■■□□ 2.85
SLC43A3-213ENST00000529494 CHIC1Q5VXU3 224 aa32.86■■■□□ 2.85
SLC43A3-213ENST00000529494 ABCA10Q8WWZ4 1543 aa32.83■■■□□ 2.85
SLC43A3-213ENST00000529494 WDR97A6NE52 1622 aa32.8■■■□□ 2.84
SLC43A3-213ENST00000529494 ZNF608Q9ULD9 1512 aaPredicted RBP32.73■■■□□ 2.83
SLC43A3-213ENST00000529494 EIF4G3O43432 1585 aaKnown RBP32.66■■■□□ 2.82
SLC43A3-213ENST00000529494 TDRD9Q8NDG6 1382 aaKnown RBP32.66■■■□□ 2.82
SLC43A3-213ENST00000529494 ABCA5Q8WWZ7 1642 aa32.64■■■□□ 2.82
SLC43A3-213ENST00000529494 AQRO60306 1485 aaKnown RBP eCLIP32.62■■■□□ 2.811e-9■■■■■ 38.7
SLC43A3-213ENST00000529494 GAPVD1Q14C86 1478 aa32.59■■■□□ 2.81
SLC43A3-213ENST00000529494 KIF27Q86VH2 1401 aa32.59■■■□□ 2.81
SLC43A3-213ENST00000529494 GRIN2BQ13224 1484 aa32.53■■■□□ 2.8
SLC43A3-213ENST00000529494 ERICH3Q5RHP9 1530 aa32.46■■■□□ 2.79
SLC43A3-213ENST00000529494 PBRM1Q86U86 1689 aa32.45■■■□□ 2.79
SLC43A3-213ENST00000529494 EEA1Q15075 1411 aa32.41■■■□□ 2.78
SLC43A3-213ENST00000529494 MAGI1Q96QZ7 1491 aaPredicted RBP32.4■■■□□ 2.78
SLC43A3-213ENST00000529494 RUSC2Q8N2Y8 1516 aa32.38■■■□□ 2.77
SLC43A3-213ENST00000529494 SNAPC4Q5SXM2 1469 aa32.37■■■□□ 2.77
SLC43A3-213ENST00000529494 IGF1RP08069 1367 aa32.35■■■□□ 2.77
SLC43A3-213ENST00000529494 ADAMTS12P58397 1594 aa32.28■■■□□ 2.76
SLC43A3-213ENST00000529494 CUL7Q14999 1698 aa32.27■■■□□ 2.76
SLC43A3-213ENST00000529494 FHAD1B1AJZ9 1412 aa32.26■■■□□ 2.76
SLC43A3-213ENST00000529494 SYNJ2O15056 1496 aa32.25■■■□□ 2.75
SLC43A3-213ENST00000529494 CSRNP3Q8WYN3 585 aa32.19■■■□□ 2.74
SLC43A3-213ENST00000529494 CARMIL1Q5VZK9 1371 aa32.17■■■□□ 2.74
SLC43A3-213ENST00000529494 CHMP7Q8WUX9 453 aaPredicted RBP32.13■■■□□ 2.73
SLC43A3-213ENST00000529494 PRXQ9BXM0 1461 aa32.12■■■□□ 2.73
SLC43A3-213ENST00000529494 GRIN2AQ12879 1464 aa32.1■■■□□ 2.73
SLC43A3-213ENST00000529494 FAM9AQ8IZU1 332 aaPredicted RBP32.09■■■□□ 2.73
SLC43A3-213ENST00000529494 CHD1O14646 1710 aa32.09■■■□□ 2.73
SLC43A3-213ENST00000529494 FBLN2P98095 1184 aa32.07■■■□□ 2.72
SLC43A3-213ENST00000529494 RAPGEF2Q9Y4G8 1499 aa32.07■■■□□ 2.72
SLC43A3-213ENST00000529494 KIF21BO75037 1637 aa31.98■■■□□ 2.71
SLC43A3-213ENST00000529494 NUP160Q12769 1436 aa31.95■■■□□ 2.71
SLC43A3-213ENST00000529494 OSCARQ8IYS5 282 aa31.94■■■□□ 2.7
SLC43A3-213ENST00000529494 CEP170Q5SW79 1584 aa31.9■■■□□ 2.7
SLC43A3-213ENST00000529494 CLASP1Q7Z460 1538 aa31.83■■■□□ 2.69
SLC43A3-213ENST00000529494 GOLGA3Q08378 1498 aa31.83■■■□□ 2.69
SLC43A3-213ENST00000529494 KIAA0586Q9BVV6 1533 aa31.8■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms