RNA–Protein interactions for RNA: ENST00000529170.5

MKNK1-222, Transcript of MAP kinase interacting serine/threonine kinase 1, humanhuman

TSL 4

Gene MKNK1, Length 530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKNK1-222ENST00000529170 NISCHQ9Y2I1 1504 aa21.24■□□□□ 0.99
MKNK1-222ENST00000529170 ABCC9O60706 1549 aa19.44■□□□□ 0.7
MKNK1-222ENST00000529170 CCDC180Q9P1Z9 1646 aa19.07■□□□□ 0.64
MKNK1-222ENST00000529170 DNAJC5BQ9UF47 199 aa18.59■□□□□ 0.57
MKNK1-222ENST00000529170 RB1CC1Q8TDY2 1594 aa18.32■□□□□ 0.52
MKNK1-222ENST00000529170 NACADO15069 1562 aa18.15■□□□□ 0.5
MKNK1-222ENST00000529170 PABPN1Q86U42 306 aaKnown RBP eCLIP18.13■□□□□ 0.49
MKNK1-222ENST00000529170 DCAF8L2P0C7V8 631 aa18.1■□□□□ 0.49
MKNK1-222ENST00000529170 UNC13AQ9UPW8 1703 aa17.89■□□□□ 0.46
MKNK1-222ENST00000529170 BICRAQ9NZM4 1560 aa17.87■□□□□ 0.45
MKNK1-222ENST00000529170 MYO15BQ96JP2 1530 aa17.82■□□□□ 0.44
MKNK1-222ENST00000529170 ZCCHC6Q5VYS8 1495 aaKnown RBP17.54■□□□□ 0.4
MKNK1-222ENST00000529170 CECR2Q9BXF3 1484 aa17.53■□□□□ 0.4
MKNK1-222ENST00000529170 CC2D2AQ9P2K1 1620 aa17.51■□□□□ 0.39
MKNK1-222ENST00000529170 SHROOM4Q9ULL8 1493 aa17.5■□□□□ 0.39
MKNK1-222ENST00000529170 DCAF1Q9Y4B6 1507 aa17.5■□□□□ 0.39
MKNK1-222ENST00000529170 SCRIBQ14160 1630 aa17.42■□□□□ 0.38
MKNK1-222ENST00000529170 EIF4G1Q04637 1599 aaKnown RBP17.41■□□□□ 0.38
MKNK1-222ENST00000529170 DNAJC5Q9H3Z4 198 aa17.2■□□□□ 0.34
MKNK1-222ENST00000529170 CUX2O14529 1486 aa16.81■□□□□ 0.28
MKNK1-222ENST00000529170 NCAPD3P42695 1498 aa16.81■□□□□ 0.28
MKNK1-222ENST00000529170 ERCC6Q03468 1493 aa16.75■□□□□ 0.27
MKNK1-222ENST00000529170 ATAD2BQ9ULI0 1458 aa16.73■□□□□ 0.27
MKNK1-222ENST00000529170 NESP48681 1621 aa16.65■□□□□ 0.26
MKNK1-222ENST00000529170 SMARCA2P51531 1590 aa16.6■□□□□ 0.25
MKNK1-222ENST00000529170 HMGXB3Q12766 1538 aa16.6■□□□□ 0.25
MKNK1-222ENST00000529170 SMARCA4P51532 1647 aa16.59■□□□□ 0.25
MKNK1-222ENST00000529170 BAZ1BQ9UIG0 1483 aaKnown RBP16.5■□□□□ 0.23
MKNK1-222ENST00000529170 THOC2Q8NI27 1593 aaKnown RBP16.46■□□□□ 0.23
MKNK1-222ENST00000529170 BAZ1AQ9NRL2 1556 aaPredicted RBP16.46■□□□□ 0.23
MKNK1-222ENST00000529170 PEG3Q9GZU2 1588 aa16.43■□□□□ 0.22
MKNK1-222ENST00000529170 LAMC3Q9Y6N6 1575 aa16.4■□□□□ 0.22
MKNK1-222ENST00000529170 MROH2BQ7Z745 1585 aa16.39■□□□□ 0.21
MKNK1-222ENST00000529170 PDS5BQ9NTI5 1447 aa16.36■□□□□ 0.21
MKNK1-222ENST00000529170 KIF21AQ7Z4S6 1674 aa16.34■□□□□ 0.21
MKNK1-222ENST00000529170 TRIM41Q8WV44 630 aa16.32■□□□□ 0.2
MKNK1-222ENST00000529170 CADPSQ9ULU8 1353 aa16.3■□□□□ 0.2
MKNK1-222ENST00000529170 MRC2Q9UBG0 1479 aa16.22■□□□□ 0.19
MKNK1-222ENST00000529170 WDR62O43379 1518 aa16.19■□□□□ 0.18
MKNK1-222ENST00000529170 WIZO95785 1651 aa16.14■□□□□ 0.18
MKNK1-222ENST00000529170 CEP164Q9UPV0 1460 aa16.1■□□□□ 0.17
MKNK1-222ENST00000529170 FANCD2Q9BXW9 1451 aa16.09■□□□□ 0.17
MKNK1-222ENST00000529170 OSCARQ8IYS5 282 aa16.08■□□□□ 0.16
MKNK1-222ENST00000529170 CFTRP13569 1480 aa16.04■□□□□ 0.16
MKNK1-222ENST00000529170 URB2Q14146 1524 aaKnown RBP15.99■□□□□ 0.15
MKNK1-222ENST00000529170 RSF1Q96T23 1441 aaPredicted RBP15.98■□□□□ 0.15
MKNK1-222ENST00000529170 TOP2AP11388 1531 aaKnown RBP15.9■□□□□ 0.14
MKNK1-222ENST00000529170 ZNF608Q9ULD9 1512 aaPredicted RBP15.85■□□□□ 0.13
MKNK1-222ENST00000529170 RIMBP3CA6NJZ7 1639 aa15.83■□□□□ 0.13
MKNK1-222ENST00000529170 RIMBP3BA6NNM3 1639 aa15.83■□□□□ 0.13
MKNK1-222ENST00000529170 RIMBP3Q9UFD9 1639 aa15.83■□□□□ 0.13
MKNK1-222ENST00000529170 IFT140Q96RY7 1462 aa15.8■□□□□ 0.12
MKNK1-222ENST00000529170 CCDC88BA6NC98 1476 aa15.78■□□□□ 0.12
MKNK1-222ENST00000529170 ARHGEF11O15085 1522 aa15.77■□□□□ 0.11
MKNK1-222ENST00000529170 TOPBP1Q92547 1522 aa15.75■□□□□ 0.11
MKNK1-222ENST00000529170 CYB5RLQ6IPT4 315 aa15.74■□□□□ 0.11
MKNK1-222ENST00000529170 PRDM2Q13029 1718 aa15.72■□□□□ 0.11
MKNK1-222ENST00000529170 AQRO60306 1485 aaKnown RBP eCLIP15.68■□□□□ 0.17e-6■■□□□ 12.2
MKNK1-222ENST00000529170 EIF4G3O43432 1585 aaKnown RBP15.66■□□□□ 0.1
MKNK1-222ENST00000529170 ABCC8Q09428 1581 aa15.66■□□□□ 0.1
MKNK1-222ENST00000529170 DNMBPQ6XZF7 1577 aa15.63■□□□□ 0.09
MKNK1-222ENST00000529170 TARBP1Q13395 1621 aaKnown RBP15.62■□□□□ 0.09
MKNK1-222ENST00000529170 FBLN2P98095 1184 aa15.62■□□□□ 0.09
MKNK1-222ENST00000529170 ARAP1Q96P48 1450 aa15.62■□□□□ 0.09
MKNK1-222ENST00000529170 TRHP20396 242 aaPredicted RBP15.61■□□□□ 0.09
MKNK1-222ENST00000529170 CHD1O14646 1710 aa15.59■□□□□ 0.09
MKNK1-222ENST00000529170 POLA1P09884 1462 aaPredicted RBP15.59■□□□□ 0.09
MKNK1-222ENST00000529170 RAD54L2Q9Y4B4 1467 aa15.57■□□□□ 0.08
MKNK1-222ENST00000529170 TDRD9Q8NDG6 1382 aaKnown RBP15.55■□□□□ 0.08
MKNK1-222ENST00000529170 SOGA1O94964 1423 aa15.52■□□□□ 0.08
MKNK1-222ENST00000529170 SNAPC4Q5SXM2 1469 aa15.47■□□□□ 0.07
MKNK1-222ENST00000529170 CHMP7Q8WUX9 453 aaPredicted RBP15.46■□□□□ 0.07
MKNK1-222ENST00000529170 CLASP1Q7Z460 1538 aa15.44■□□□□ 0.06
MKNK1-222ENST00000529170 FGD5Q6ZNL6 1462 aa15.44■□□□□ 0.06
MKNK1-222ENST00000529170 CUX1P39880 1505 aa15.41■□□□□ 0.06
MKNK1-222ENST00000529170 GRIN2BQ13224 1484 aa15.39■□□□□ 0.05
MKNK1-222ENST00000529170 MAGI1Q96QZ7 1491 aaPredicted RBP15.39■□□□□ 0.05
MKNK1-222ENST00000529170 SYNJ1O43426 1573 aa15.37■□□□□ 0.05
MKNK1-222ENST00000529170 WDR97A6NE52 1622 aa15.37■□□□□ 0.05
MKNK1-222ENST00000529170 SYNJ2O15056 1496 aa15.35■□□□□ 0.05
MKNK1-222ENST00000529170 GAPVD1Q14C86 1478 aa15.32■□□□□ 0.04
MKNK1-222ENST00000529170 AEBP2Q6ZN18 517 aaPredicted RBP15.31■□□□□ 0.04
MKNK1-222ENST00000529170 ABCA10Q8WWZ4 1543 aa15.25■□□□□ 0.03
MKNK1-222ENST00000529170 PBRM1Q86U86 1689 aa15.24■□□□□ 0.03
MKNK1-222ENST00000529170 ERCC6L2Q5T890 1561 aa15.24■□□□□ 0.03
MKNK1-222ENST00000529170 ABCA5Q8WWZ7 1642 aa15.21■□□□□ 0.03
MKNK1-222ENST00000529170 GRIN2AQ12879 1464 aa15.19■□□□□ 0.02
MKNK1-222ENST00000529170 NUP160Q12769 1436 aa15.17■□□□□ 0.02
MKNK1-222ENST00000529170 CEP170Q5SW79 1584 aa15.15■□□□□ 0.02
MKNK1-222ENST00000529170 WRNQ14191 1432 aaPredicted RBP eCLIP15.13■□□□□ 0.01
MKNK1-222ENST00000529170 ADAMTS12P58397 1594 aa15.12■□□□□ 0.01
MKNK1-222ENST00000529170 FHAD1B1AJZ9 1412 aa15.1■□□□□ 0.01
MKNK1-222ENST00000529170 SUPT5HO00267 1087 aaKnown RBP15.09■□□□□ 0.01
MKNK1-222ENST00000529170 SHROOM2Q13796 1616 aa15.08■□□□□ 0
MKNK1-222ENST00000529170 JPH4Q96JJ6 628 aa15.06■□□□□ 0
MKNK1-222ENST00000529170 TOP2BQ02880 1626 aa15.04■□□□□ -0
MKNK1-222ENST00000529170 PRG4Q92954 1404 aaPredicted RBP15.04■□□□□ -0
MKNK1-222ENST00000529170 BIVM-ERCC5R4GMW8 1640 aa15.03■□□□□ -0
MKNK1-222ENST00000529170 ERICH3Q5RHP9 1530 aa15.02■□□□□ -0
MKNK1-222ENST00000529170 CHIC1Q5VXU3 224 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms