RNA–Protein interactions for RNA: ENST00000528997.5

MVB12A-209, Transcript of multivesicular body subunit 12A, humanhuman

TSL 2

Gene MVB12A, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MVB12A-209ENST00000528997 NISCHQ9Y2I1 1504 aa46.92■■■■■ 5.1
MVB12A-209ENST00000528997 CCDC180Q9P1Z9 1646 aa41.87■■■■■ 4.29
MVB12A-209ENST00000528997 ABCC9O60706 1549 aa41.22■■■■■ 4.19
MVB12A-209ENST00000528997 RB1CC1Q8TDY2 1594 aa39.52■■■■□ 3.92
MVB12A-209ENST00000528997 NACADO15069 1562 aa39.38■■■■□ 3.9
MVB12A-209ENST00000528997 DCAF8L2P0C7V8 631 aa39.27■■■■□ 3.88
MVB12A-209ENST00000528997 ZCCHC6Q5VYS8 1495 aaKnown RBP39.06■■■■□ 3.84
MVB12A-209ENST00000528997 MYO15BQ96JP2 1530 aa39.04■■■■□ 3.84
MVB12A-209ENST00000528997 DCAF1Q9Y4B6 1507 aa38.79■■■■□ 3.8
MVB12A-209ENST00000528997 UNC13AQ9UPW8 1703 aa38.66■■■■□ 3.78
MVB12A-209ENST00000528997 PABPN1Q86U42 306 aaKnown RBP eCLIP38.42■■■■□ 3.74
MVB12A-209ENST00000528997 BICRAQ9NZM4 1560 aa38.34■■■■□ 3.73
MVB12A-209ENST00000528997 SCRIBQ14160 1630 aa38.22■■■■□ 3.71
MVB12A-209ENST00000528997 DNAJC5BQ9UF47 199 aa37.99■■■■□ 3.67
MVB12A-209ENST00000528997 SHROOM4Q9ULL8 1493 aa37.89■■■■□ 3.66
MVB12A-209ENST00000528997 EIF4G1Q04637 1599 aaKnown RBP37.35■■■■□ 3.57
MVB12A-209ENST00000528997 CC2D2AQ9P2K1 1620 aa37.27■■■■□ 3.56
MVB12A-209ENST00000528997 CECR2Q9BXF3 1484 aa37.04■■■■□ 3.52
MVB12A-209ENST00000528997 SMARCA4P51532 1647 aa36.51■■■■□ 3.43
MVB12A-209ENST00000528997 BAZ1AQ9NRL2 1556 aaPredicted RBP36.4■■■■□ 3.42
MVB12A-209ENST00000528997 ATAD2BQ9ULI0 1458 aa36.33■■■■□ 3.41
MVB12A-209ENST00000528997 NCAPD3P42695 1498 aa36.32■■■■□ 3.41
MVB12A-209ENST00000528997 SMARCA2P51531 1590 aa36.28■■■■□ 3.4
MVB12A-209ENST00000528997 MROH2BQ7Z745 1585 aa36.18■■■■□ 3.38
MVB12A-209ENST00000528997 HMGXB3Q12766 1538 aa36.18■■■■□ 3.38
MVB12A-209ENST00000528997 PEG3Q9GZU2 1588 aa36.12■■■■□ 3.37
MVB12A-209ENST00000528997 BAZ1BQ9UIG0 1483 aaKnown RBP36.05■■■■□ 3.36
MVB12A-209ENST00000528997 WIZO95785 1651 aa35.8■■■■□ 3.32
MVB12A-209ENST00000528997 RSF1Q96T23 1441 aaPredicted RBP35.64■■■■□ 3.3
MVB12A-209ENST00000528997 NESP48681 1621 aa35.59■■■■□ 3.29
MVB12A-209ENST00000528997 ERCC6Q03468 1493 aa35.54■■■■□ 3.28
MVB12A-209ENST00000528997 LAMC3Q9Y6N6 1575 aa35.45■■■■□ 3.27
MVB12A-209ENST00000528997 TOP2AP11388 1531 aaKnown RBP35.4■■■■□ 3.26
MVB12A-209ENST00000528997 CADPSQ9ULU8 1353 aa35.25■■■■□ 3.23
MVB12A-209ENST00000528997 CUX2O14529 1486 aa35.23■■■■□ 3.23
MVB12A-209ENST00000528997 KIF21AQ7Z4S6 1674 aa35.2■■■■□ 3.23
MVB12A-209ENST00000528997 PDS5BQ9NTI5 1447 aa35.18■■■■□ 3.22
MVB12A-209ENST00000528997 THOC2Q8NI27 1593 aaKnown RBP35.14■■■■□ 3.22
MVB12A-209ENST00000528997 CFTRP13569 1480 aa35.01■■■■□ 3.19
MVB12A-209ENST00000528997 CCDC88BA6NC98 1476 aa34.94■■■■□ 3.18
MVB12A-209ENST00000528997 FANCD2Q9BXW9 1451 aa34.89■■■■□ 3.18
MVB12A-209ENST00000528997 MRC2Q9UBG0 1479 aa34.89■■■■□ 3.18
MVB12A-209ENST00000528997 CEP164Q9UPV0 1460 aa34.88■■■■□ 3.17
MVB12A-209ENST00000528997 WDR62O43379 1518 aa34.79■■■■□ 3.16
MVB12A-209ENST00000528997 PRDM2Q13029 1718 aa34.78■■■■□ 3.16
MVB12A-209ENST00000528997 URB2Q14146 1524 aaKnown RBP34.57■■■■□ 3.12
MVB12A-209ENST00000528997 SUPT5HO00267 1087 aaKnown RBP34.54■■■■□ 3.12
MVB12A-209ENST00000528997 DNAJC5Q9H3Z4 198 aa34.49■■■■□ 3.11
MVB12A-209ENST00000528997 TOPBP1Q92547 1522 aa34.31■■■■□ 3.08
MVB12A-209ENST00000528997 DNMBPQ6XZF7 1577 aa34.26■■■■□ 3.07
MVB12A-209ENST00000528997 ABCC8Q09428 1581 aa34.23■■■■□ 3.07
MVB12A-209ENST00000528997 IFT140Q96RY7 1462 aa34.14■■■■□ 3.06
MVB12A-209ENST00000528997 ZNF608Q9ULD9 1512 aaPredicted RBP34.03■■■■□ 3.04
MVB12A-209ENST00000528997 POLA1P09884 1462 aaPredicted RBP34.01■■■■□ 3.03
MVB12A-209ENST00000528997 TARBP1Q13395 1621 aaKnown RBP33.97■■■■□ 3.03
MVB12A-209ENST00000528997 CUX1P39880 1505 aa33.96■■■■□ 3.03
MVB12A-209ENST00000528997 EIF4G3O43432 1585 aaKnown RBP33.93■■■■□ 3.02
MVB12A-209ENST00000528997 FGD5Q6ZNL6 1462 aa33.89■■■■□ 3.02
MVB12A-209ENST00000528997 RAD54L2Q9Y4B4 1467 aa33.86■■■■□ 3.01
MVB12A-209ENST00000528997 SOGA1O94964 1423 aa33.81■■■■□ 3
MVB12A-209ENST00000528997 AQRO60306 1485 aaKnown RBP eCLIP33.78■■■■□ 3
MVB12A-209ENST00000528997 TDRD9Q8NDG6 1382 aaKnown RBP33.67■■■□□ 2.98
MVB12A-209ENST00000528997 WDR97A6NE52 1622 aa33.67■■■□□ 2.98
MVB12A-209ENST00000528997 OSCARQ8IYS5 282 aa33.66■■■□□ 2.98
MVB12A-209ENST00000528997 WRNQ14191 1432 aaPredicted RBP eCLIP33.62■■■□□ 2.97
MVB12A-209ENST00000528997 BIVM-ERCC5R4GMW8 1640 aa33.61■■■□□ 2.97
MVB12A-209ENST00000528997 SYNJ1O43426 1573 aa33.6■■■□□ 2.97
MVB12A-209ENST00000528997 TOP2BQ02880 1626 aa33.6■■■□□ 2.97
MVB12A-209ENST00000528997 CHD1O14646 1710 aa33.55■■■□□ 2.96
MVB12A-209ENST00000528997 ABCA10Q8WWZ4 1543 aa33.53■■■□□ 2.96
MVB12A-209ENST00000528997 SNAPC4Q5SXM2 1469 aa33.5■■■□□ 2.95
MVB12A-209ENST00000528997 GRIN2BQ13224 1484 aa33.48■■■□□ 2.95
MVB12A-209ENST00000528997 ABCA5Q8WWZ7 1642 aa33.46■■■□□ 2.95
MVB12A-209ENST00000528997 PBRM1Q86U86 1689 aa33.45■■■□□ 2.95
MVB12A-209ENST00000528997 GAPVD1Q14C86 1478 aa33.44■■■□□ 2.94
MVB12A-209ENST00000528997 MAGI1Q96QZ7 1491 aaPredicted RBP33.42■■■□□ 2.94
MVB12A-209ENST00000528997 FBLN2P98095 1184 aa33.41■■■□□ 2.94
MVB12A-209ENST00000528997 SYNJ2O15056 1496 aa33.3■■■□□ 2.92
MVB12A-209ENST00000528997 CHMP7Q8WUX9 453 aaPredicted RBP33.26■■■□□ 2.91
MVB12A-209ENST00000528997 RIMBP3CA6NJZ7 1639 aa33.26■■■□□ 2.91
MVB12A-209ENST00000528997 RIMBP3BA6NNM3 1639 aa33.26■■■□□ 2.91
MVB12A-209ENST00000528997 RIMBP3Q9UFD9 1639 aa33.26■■■□□ 2.91
MVB12A-209ENST00000528997 TRIM41Q8WV44 630 aa33.22■■■□□ 2.91
MVB12A-209ENST00000528997 ARHGEF11O15085 1522 aa33.22■■■□□ 2.91
MVB12A-209ENST00000528997 ADAMTS12P58397 1594 aa33.18■■■□□ 2.9
MVB12A-209ENST00000528997 CLASP1Q7Z460 1538 aa33.16■■■□□ 2.9
MVB12A-209ENST00000528997 ERICH3Q5RHP9 1530 aa33.12■■■□□ 2.89
MVB12A-209ENST00000528997 GRIN2AQ12879 1464 aa33.06■■■□□ 2.88
MVB12A-209ENST00000528997 FHAD1B1AJZ9 1412 aa33.04■■■□□ 2.88
MVB12A-209ENST00000528997 CEP170Q5SW79 1584 aa32.94■■■□□ 2.86
MVB12A-209ENST00000528997 KIF27Q86VH2 1401 aa32.94■■■□□ 2.86
MVB12A-209ENST00000528997 ARAP1Q96P48 1450 aa32.93■■■□□ 2.86
MVB12A-209ENST00000528997 NUP160Q12769 1436 aa32.91■■■□□ 2.86
MVB12A-209ENST00000528997 CYB5RLQ6IPT4 315 aa32.84■■■□□ 2.85
MVB12A-209ENST00000528997 CUL7Q14999 1698 aa32.81■■■□□ 2.84
MVB12A-209ENST00000528997 IGF1RP08069 1367 aa32.79■■■□□ 2.84
MVB12A-209ENST00000528997 SHROOM2Q13796 1616 aa32.72■■■□□ 2.83
MVB12A-209ENST00000528997 RUSC2Q8N2Y8 1516 aa32.7■■■□□ 2.83
MVB12A-209ENST00000528997 ERCC6L2Q5T890 1561 aa32.69■■■□□ 2.82
MVB12A-209ENST00000528997 CARMIL1Q5VZK9 1371 aa32.61■■■□□ 2.81
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms