RNA–Protein interactions for RNA: ENST00000528996.1

SERPING1-208, Transcript of serpin family G member 1, humanhuman

TSL 3

Gene SERPING1, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERPING1-208ENST00000528996 NISCHQ9Y2I1 1504 aa41.59■■■■■ 4.25
SERPING1-208ENST00000528996 ABCC9O60706 1549 aa37.47■■■■□ 3.59
SERPING1-208ENST00000528996 CCDC180Q9P1Z9 1646 aa37.4■■■■□ 3.58
SERPING1-208ENST00000528996 RB1CC1Q8TDY2 1594 aa35.7■■■■□ 3.31
SERPING1-208ENST00000528996 NACADO15069 1562 aa35.42■■■■□ 3.26
SERPING1-208ENST00000528996 DCAF8L2P0C7V8 631 aa35.21■■■■□ 3.23
SERPING1-208ENST00000528996 DNAJC5BQ9UF47 199 aa35.2■■■■□ 3.23
SERPING1-208ENST00000528996 MYO15BQ96JP2 1530 aa34.93■■■■□ 3.18
SERPING1-208ENST00000528996 PABPN1Q86U42 306 aaKnown RBP eCLIP34.87■■■■□ 3.17
SERPING1-208ENST00000528996 UNC13AQ9UPW8 1703 aa34.73■■■■□ 3.15
SERPING1-208ENST00000528996 BICRAQ9NZM4 1560 aa34.53■■■■□ 3.12
SERPING1-208ENST00000528996 ZCCHC6Q5VYS8 1495 aaKnown RBP34.43■■■■□ 3.1
SERPING1-208ENST00000528996 DCAF1Q9Y4B6 1507 aa34.41■■■■□ 3.1
SERPING1-208ENST00000528996 SHROOM4Q9ULL8 1493 aa34.26■■■■□ 3.07
SERPING1-208ENST00000528996 SCRIBQ14160 1630 aa34■■■■□ 3.03
SERPING1-208ENST00000528996 CC2D2AQ9P2K1 1620 aa33.84■■■■□ 3.01
SERPING1-208ENST00000528996 CECR2Q9BXF3 1484 aa33.82■■■■□ 3.01
SERPING1-208ENST00000528996 EIF4G1Q04637 1599 aaKnown RBP33.77■■■■□ 3
SERPING1-208ENST00000528996 NCAPD3P42695 1498 aa32.7■■■□□ 2.83
SERPING1-208ENST00000528996 DNAJC5Q9H3Z4 198 aa32.55■■■□□ 2.8
SERPING1-208ENST00000528996 ATAD2BQ9ULI0 1458 aa32.54■■■□□ 2.8
SERPING1-208ENST00000528996 SMARCA2P51531 1590 aa32.5■■■□□ 2.79
SERPING1-208ENST00000528996 ERCC6Q03468 1493 aa32.46■■■□□ 2.79
SERPING1-208ENST00000528996 SMARCA4P51532 1647 aa32.45■■■□□ 2.79
SERPING1-208ENST00000528996 CUX2O14529 1486 aa32.45■■■□□ 2.79
SERPING1-208ENST00000528996 HMGXB3Q12766 1538 aa32.43■■■□□ 2.78
SERPING1-208ENST00000528996 BAZ1AQ9NRL2 1556 aaPredicted RBP32.34■■■□□ 2.77
SERPING1-208ENST00000528996 BAZ1BQ9UIG0 1483 aaKnown RBP32.25■■■□□ 2.75
SERPING1-208ENST00000528996 PEG3Q9GZU2 1588 aa32.18■■■□□ 2.74
SERPING1-208ENST00000528996 NESP48681 1621 aa32.11■■■□□ 2.73
SERPING1-208ENST00000528996 MROH2BQ7Z745 1585 aa31.99■■■□□ 2.71
SERPING1-208ENST00000528996 LAMC3Q9Y6N6 1575 aa31.98■■■□□ 2.71
SERPING1-208ENST00000528996 PDS5BQ9NTI5 1447 aa31.85■■■□□ 2.69
SERPING1-208ENST00000528996 THOC2Q8NI27 1593 aaKnown RBP31.83■■■□□ 2.69
SERPING1-208ENST00000528996 CADPSQ9ULU8 1353 aa31.7■■■□□ 2.67
SERPING1-208ENST00000528996 KIF21AQ7Z4S6 1674 aa31.7■■■□□ 2.66
SERPING1-208ENST00000528996 WIZO95785 1651 aa31.58■■■□□ 2.65
SERPING1-208ENST00000528996 MRC2Q9UBG0 1479 aa31.52■■■□□ 2.64
SERPING1-208ENST00000528996 WDR62O43379 1518 aa31.42■■■□□ 2.62
SERPING1-208ENST00000528996 CEP164Q9UPV0 1460 aa31.38■■■□□ 2.61
SERPING1-208ENST00000528996 RSF1Q96T23 1441 aaPredicted RBP31.32■■■□□ 2.61
SERPING1-208ENST00000528996 FANCD2Q9BXW9 1451 aa31.32■■■□□ 2.6
SERPING1-208ENST00000528996 CFTRP13569 1480 aa31.3■■■□□ 2.6
SERPING1-208ENST00000528996 TOP2AP11388 1531 aaKnown RBP31.25■■■□□ 2.59
SERPING1-208ENST00000528996 TRIM41Q8WV44 630 aa31.04■■■□□ 2.56
SERPING1-208ENST00000528996 URB2Q14146 1524 aaKnown RBP31.01■■■□□ 2.55
SERPING1-208ENST00000528996 OSCARQ8IYS5 282 aa30.98■■■□□ 2.55
SERPING1-208ENST00000528996 PRDM2Q13029 1718 aa30.93■■■□□ 2.54
SERPING1-208ENST00000528996 CCDC88BA6NC98 1476 aa30.88■■■□□ 2.53
SERPING1-208ENST00000528996 IFT140Q96RY7 1462 aa30.78■■■□□ 2.52
SERPING1-208ENST00000528996 ABCC8Q09428 1581 aa30.74■■■□□ 2.51
SERPING1-208ENST00000528996 TOPBP1Q92547 1522 aa30.69■■■□□ 2.5
SERPING1-208ENST00000528996 ZNF608Q9ULD9 1512 aaPredicted RBP30.63■■■□□ 2.49
SERPING1-208ENST00000528996 DNMBPQ6XZF7 1577 aa30.58■■■□□ 2.49
SERPING1-208ENST00000528996 EIF4G3O43432 1585 aaKnown RBP30.49■■■□□ 2.47
SERPING1-208ENST00000528996 RIMBP3CA6NJZ7 1639 aa30.46■■■□□ 2.47
SERPING1-208ENST00000528996 RIMBP3BA6NNM3 1639 aa30.46■■■□□ 2.47
SERPING1-208ENST00000528996 RIMBP3Q9UFD9 1639 aa30.46■■■□□ 2.47
SERPING1-208ENST00000528996 TARBP1Q13395 1621 aaKnown RBP30.39■■■□□ 2.46
SERPING1-208ENST00000528996 ARHGEF11O15085 1522 aa30.38■■■□□ 2.45
SERPING1-208ENST00000528996 AQRO60306 1485 aaKnown RBP eCLIP30.38■■■□□ 2.45
SERPING1-208ENST00000528996 POLA1P09884 1462 aaPredicted RBP30.37■■■□□ 2.45
SERPING1-208ENST00000528996 FBLN2P98095 1184 aa30.29■■■□□ 2.44
SERPING1-208ENST00000528996 SOGA1O94964 1423 aa30.27■■■□□ 2.44
SERPING1-208ENST00000528996 CHD1O14646 1710 aa30.25■■■□□ 2.43
SERPING1-208ENST00000528996 RAD54L2Q9Y4B4 1467 aa30.22■■■□□ 2.43
SERPING1-208ENST00000528996 CYB5RLQ6IPT4 315 aa30.21■■■□□ 2.43
SERPING1-208ENST00000528996 WDR97A6NE52 1622 aa30.2■■■□□ 2.43
SERPING1-208ENST00000528996 TDRD9Q8NDG6 1382 aaKnown RBP30.19■■■□□ 2.42
SERPING1-208ENST00000528996 FGD5Q6ZNL6 1462 aa30.15■■■□□ 2.42
SERPING1-208ENST00000528996 SNAPC4Q5SXM2 1469 aa30.07■■■□□ 2.4
SERPING1-208ENST00000528996 CHMP7Q8WUX9 453 aaPredicted RBP30.07■■■□□ 2.4
SERPING1-208ENST00000528996 CUX1P39880 1505 aa30.06■■■□□ 2.4
SERPING1-208ENST00000528996 MAGI1Q96QZ7 1491 aaPredicted RBP30.06■■■□□ 2.4
SERPING1-208ENST00000528996 ARAP1Q96P48 1450 aa30.05■■■□□ 2.4
SERPING1-208ENST00000528996 GRIN2BQ13224 1484 aa30.04■■■□□ 2.4
SERPING1-208ENST00000528996 SYNJ1O43426 1573 aa29.98■■■□□ 2.39
SERPING1-208ENST00000528996 SYNJ2O15056 1496 aa29.95■■■□□ 2.39
SERPING1-208ENST00000528996 TRHP20396 242 aaPredicted RBP29.95■■■□□ 2.39
SERPING1-208ENST00000528996 CLASP1Q7Z460 1538 aa29.93■■■□□ 2.38
SERPING1-208ENST00000528996 GAPVD1Q14C86 1478 aa29.89■■■□□ 2.38
SERPING1-208ENST00000528996 SUPT5HO00267 1087 aaKnown RBP29.87■■■□□ 2.37
SERPING1-208ENST00000528996 ABCA10Q8WWZ4 1543 aa29.84■■■□□ 2.37
SERPING1-208ENST00000528996 PBRM1Q86U86 1689 aa29.82■■■□□ 2.36
SERPING1-208ENST00000528996 ABCA5Q8WWZ7 1642 aa29.75■■■□□ 2.35
SERPING1-208ENST00000528996 WRNQ14191 1432 aaPredicted RBP eCLIP29.75■■■□□ 2.35
SERPING1-208ENST00000528996 GRIN2AQ12879 1464 aa29.61■■■□□ 2.33
SERPING1-208ENST00000528996 TOP2BQ02880 1626 aa29.6■■■□□ 2.33
SERPING1-208ENST00000528996 BIVM-ERCC5R4GMW8 1640 aa29.58■■■□□ 2.33
SERPING1-208ENST00000528996 ADAMTS12P58397 1594 aa29.54■■■□□ 2.32
SERPING1-208ENST00000528996 FHAD1B1AJZ9 1412 aa29.54■■■□□ 2.32
SERPING1-208ENST00000528996 NUP160Q12769 1436 aa29.52■■■□□ 2.32
SERPING1-208ENST00000528996 ERICH3Q5RHP9 1530 aa29.48■■■□□ 2.31
SERPING1-208ENST00000528996 CEP170Q5SW79 1584 aa29.46■■■□□ 2.31
SERPING1-208ENST00000528996 ERCC6L2Q5T890 1561 aa29.38■■■□□ 2.29
SERPING1-208ENST00000528996 SHROOM2Q13796 1616 aa29.38■■■□□ 2.29
SERPING1-208ENST00000528996 PRG4Q92954 1404 aaPredicted RBP29.27■■■□□ 2.28
SERPING1-208ENST00000528996 JPH4Q96JJ6 628 aa29.26■■■□□ 2.27
SERPING1-208ENST00000528996 AEBP2Q6ZN18 517 aaPredicted RBP29.23■■■□□ 2.27
SERPING1-208ENST00000528996 RUSC2Q8N2Y8 1516 aa29.13■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 231 ms