RNA–Protein interactions for RNA: ENST00000528926.5

RCOR3-211, Transcript of REST corepressor 3, humanhuman

TSL 2

Gene RCOR3, Length 1,497 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCOR3-211ENST00000528926 NISCHQ9Y2I1 1504 aa33.05■■■□□ 2.88
RCOR3-211ENST00000528926 CCDC180Q9P1Z9 1646 aa29.54■■■□□ 2.32
RCOR3-211ENST00000528926 ABCC9O60706 1549 aa28.96■■■□□ 2.23
RCOR3-211ENST00000528926 RB1CC1Q8TDY2 1594 aa27.81■■■□□ 2.04
RCOR3-211ENST00000528926 DCAF8L2P0C7V8 631 aa27.74■■■□□ 2.03
RCOR3-211ENST00000528926 NACADO15069 1562 aa27.7■■■□□ 2.03
RCOR3-211ENST00000528926 ZCCHC6Q5VYS8 1495 aaKnown RBP27.51■■□□□ 1.99
RCOR3-211ENST00000528926 MYO15BQ96JP2 1530 aa27.4■■□□□ 1.98
RCOR3-211ENST00000528926 UNC13AQ9UPW8 1703 aa27.37■■□□□ 1.97
RCOR3-211ENST00000528926 DCAF1Q9Y4B6 1507 aa27.28■■□□□ 1.96
RCOR3-211ENST00000528926 PABPN1Q86U42 306 aaKnown RBP eCLIP27■■□□□ 1.91
RCOR3-211ENST00000528926 SCRIBQ14160 1630 aa26.99■■□□□ 1.91
RCOR3-211ENST00000528926 BICRAQ9NZM4 1560 aa26.94■■□□□ 1.9
RCOR3-211ENST00000528926 SHROOM4Q9ULL8 1493 aa26.56■■□□□ 1.84
RCOR3-211ENST00000528926 DNAJC5BQ9UF47 199 aa26.55■■□□□ 1.84
RCOR3-211ENST00000528926 EIF4G1Q04637 1599 aaKnown RBP26.27■■□□□ 1.8
RCOR3-211ENST00000528926 CC2D2AQ9P2K1 1620 aa26.22■■□□□ 1.79
RCOR3-211ENST00000528926 CECR2Q9BXF3 1484 aa26■■□□□ 1.75
RCOR3-211ENST00000528926 SMARCA4P51532 1647 aa25.75■■□□□ 1.71
RCOR3-211ENST00000528926 BAZ1AQ9NRL2 1556 aaPredicted RBP25.66■■□□□ 1.7
RCOR3-211ENST00000528926 SMARCA2P51531 1590 aa25.55■■□□□ 1.68
RCOR3-211ENST00000528926 ATAD2BQ9ULI0 1458 aa25.52■■□□□ 1.68
RCOR3-211ENST00000528926 MROH2BQ7Z745 1585 aa25.5■■□□□ 1.67
RCOR3-211ENST00000528926 NCAPD3P42695 1498 aa25.48■■□□□ 1.67
RCOR3-211ENST00000528926 HMGXB3Q12766 1538 aa25.43■■□□□ 1.66
RCOR3-211ENST00000528926 PEG3Q9GZU2 1588 aa25.41■■□□□ 1.66
RCOR3-211ENST00000528926 BAZ1BQ9UIG0 1483 aaKnown RBP25.38■■□□□ 1.65
RCOR3-211ENST00000528926 WIZO95785 1651 aa25.33■■□□□ 1.64
RCOR3-211ENST00000528926 RSF1Q96T23 1441 aaPredicted RBP25.11■■□□□ 1.61
RCOR3-211ENST00000528926 NESP48681 1621 aa25.03■■□□□ 1.6
RCOR3-211ENST00000528926 ERCC6Q03468 1493 aa24.99■■□□□ 1.59
RCOR3-211ENST00000528926 TOP2AP11388 1531 aaKnown RBP24.95■■□□□ 1.59
RCOR3-211ENST00000528926 LAMC3Q9Y6N6 1575 aa24.94■■□□□ 1.58
RCOR3-211ENST00000528926 KIF21AQ7Z4S6 1674 aa24.87■■□□□ 1.57
RCOR3-211ENST00000528926 CADPSQ9ULU8 1353 aa24.75■■□□□ 1.55
RCOR3-211ENST00000528926 PDS5BQ9NTI5 1447 aa24.72■■□□□ 1.55
RCOR3-211ENST00000528926 THOC2Q8NI27 1593 aaKnown RBP24.7■■□□□ 1.54
RCOR3-211ENST00000528926 PRDM2Q13029 1718 aa24.69■■□□□ 1.54
RCOR3-211ENST00000528926 CUX2O14529 1486 aa24.67■■□□□ 1.54
RCOR3-211ENST00000528926 CCDC88BA6NC98 1476 aa24.63■■□□□ 1.53
RCOR3-211ENST00000528926 CFTRP13569 1480 aa24.6■■□□□ 1.53
RCOR3-211ENST00000528926 CEP164Q9UPV0 1460 aa24.55■■□□□ 1.52
RCOR3-211ENST00000528926 FANCD2Q9BXW9 1451 aa24.54■■□□□ 1.52
RCOR3-211ENST00000528926 MRC2Q9UBG0 1479 aa24.51■■□□□ 1.51
RCOR3-211ENST00000528926 SUPT5HO00267 1087 aaKnown RBP24.5■■□□□ 1.51
RCOR3-211ENST00000528926 WDR62O43379 1518 aa24.43■■□□□ 1.5
RCOR3-211ENST00000528926 URB2Q14146 1524 aaKnown RBP24.3■■□□□ 1.48
RCOR3-211ENST00000528926 TOPBP1Q92547 1522 aa24.14■■□□□ 1.45
RCOR3-211ENST00000528926 DNMBPQ6XZF7 1577 aa24.13■■□□□ 1.45
RCOR3-211ENST00000528926 ABCC8Q09428 1581 aa24.09■■□□□ 1.45
RCOR3-211ENST00000528926 IFT140Q96RY7 1462 aa23.99■■□□□ 1.43
RCOR3-211ENST00000528926 DNAJC5Q9H3Z4 198 aa23.96■■□□□ 1.43
RCOR3-211ENST00000528926 CUX1P39880 1505 aa23.94■■□□□ 1.42
RCOR3-211ENST00000528926 POLA1P09884 1462 aaPredicted RBP23.93■■□□□ 1.42
RCOR3-211ENST00000528926 ZNF608Q9ULD9 1512 aaPredicted RBP23.92■■□□□ 1.42
RCOR3-211ENST00000528926 TARBP1Q13395 1621 aaKnown RBP23.91■■□□□ 1.42
RCOR3-211ENST00000528926 EIF4G3O43432 1585 aaKnown RBP23.91■■□□□ 1.42
RCOR3-211ENST00000528926 FGD5Q6ZNL6 1462 aa23.88■■□□□ 1.41
RCOR3-211ENST00000528926 RAD54L2Q9Y4B4 1467 aa23.84■■□□□ 1.41
RCOR3-211ENST00000528926 SOGA1O94964 1423 aa23.8■■□□□ 1.4
RCOR3-211ENST00000528926 WDR97A6NE52 1622 aa23.77■■□□□ 1.4
RCOR3-211ENST00000528926 BIVM-ERCC5R4GMW8 1640 aa23.77■■□□□ 1.39
RCOR3-211ENST00000528926 AQRO60306 1485 aaKnown RBP eCLIP23.76■■□□□ 1.398e-7■■■□□ 18
RCOR3-211ENST00000528926 SYNJ1O43426 1573 aa23.74■■□□□ 1.39
RCOR3-211ENST00000528926 TOP2BQ02880 1626 aa23.73■■□□□ 1.39
RCOR3-211ENST00000528926 CHD1O14646 1710 aa23.72■■□□□ 1.39
RCOR3-211ENST00000528926 WRNQ14191 1432 aaPredicted RBP eCLIP23.72■■□□□ 1.39
RCOR3-211ENST00000528926 PBRM1Q86U86 1689 aa23.69■■□□□ 1.38
RCOR3-211ENST00000528926 TDRD9Q8NDG6 1382 aaKnown RBP23.69■■□□□ 1.38
RCOR3-211ENST00000528926 OSCARQ8IYS5 282 aa23.61■■□□□ 1.37
RCOR3-211ENST00000528926 ABCA10Q8WWZ4 1543 aa23.59■■□□□ 1.37
RCOR3-211ENST00000528926 ABCA5Q8WWZ7 1642 aa23.59■■□□□ 1.37
RCOR3-211ENST00000528926 SNAPC4Q5SXM2 1469 aa23.57■■□□□ 1.36
RCOR3-211ENST00000528926 GAPVD1Q14C86 1478 aa23.55■■□□□ 1.36
RCOR3-211ENST00000528926 FBLN2P98095 1184 aa23.55■■□□□ 1.36
RCOR3-211ENST00000528926 GRIN2BQ13224 1484 aa23.54■■□□□ 1.36
RCOR3-211ENST00000528926 MAGI1Q96QZ7 1491 aaPredicted RBP23.5■■□□□ 1.35
RCOR3-211ENST00000528926 SYNJ2O15056 1496 aa23.41■■□□□ 1.34
RCOR3-211ENST00000528926 CHMP7Q8WUX9 453 aaPredicted RBP23.41■■□□□ 1.34
RCOR3-211ENST00000528926 RIMBP3CA6NJZ7 1639 aa23.39■■□□□ 1.33
RCOR3-211ENST00000528926 RIMBP3BA6NNM3 1639 aa23.39■■□□□ 1.33
RCOR3-211ENST00000528926 RIMBP3Q9UFD9 1639 aa23.39■■□□□ 1.33
RCOR3-211ENST00000528926 ADAMTS12P58397 1594 aa23.38■■□□□ 1.33
RCOR3-211ENST00000528926 ERICH3Q5RHP9 1530 aa23.33■■□□□ 1.33
RCOR3-211ENST00000528926 ARHGEF11O15085 1522 aa23.3■■□□□ 1.32
RCOR3-211ENST00000528926 TRIM41Q8WV44 630 aa23.29■■□□□ 1.32
RCOR3-211ENST00000528926 CLASP1Q7Z460 1538 aa23.29■■□□□ 1.32
RCOR3-211ENST00000528926 GRIN2AQ12879 1464 aa23.26■■□□□ 1.31
RCOR3-211ENST00000528926 FHAD1B1AJZ9 1412 aa23.23■■□□□ 1.31
RCOR3-211ENST00000528926 KIF27Q86VH2 1401 aa23.22■■□□□ 1.31
RCOR3-211ENST00000528926 CEP170Q5SW79 1584 aa23.2■■□□□ 1.3
RCOR3-211ENST00000528926 CUL7Q14999 1698 aa23.19■■□□□ 1.3
RCOR3-211ENST00000528926 NUP160Q12769 1436 aa23.1■■□□□ 1.29
RCOR3-211ENST00000528926 ARAP1Q96P48 1450 aa23.09■■□□□ 1.29
RCOR3-211ENST00000528926 IGF1RP08069 1367 aa23.07■■□□□ 1.28
RCOR3-211ENST00000528926 CYB5RLQ6IPT4 315 aa23.06■■□□□ 1.28
RCOR3-211ENST00000528926 RUSC2Q8N2Y8 1516 aa23.05■■□□□ 1.28
RCOR3-211ENST00000528926 SHROOM2Q13796 1616 aa23.03■■□□□ 1.28
RCOR3-211ENST00000528926 ERCC6L2Q5T890 1561 aa23.01■■□□□ 1.27
RCOR3-211ENST00000528926 CARMIL1Q5VZK9 1371 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 129.7 ms