RNA–Protein interactions for RNA: ENST00000528559.5

PITPNM1-211, Transcript of phosphatidylinositol transfer protein membrane associated 1, humanhuman

TSL 4

Gene PITPNM1, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITPNM1-211ENST00000528559 NISCHQ9Y2I1 1504 aa35.57■■■■□ 3.28
PITPNM1-211ENST00000528559 ABCC9O60706 1549 aa32.53■■■□□ 2.8
PITPNM1-211ENST00000528559 CCDC180Q9P1Z9 1646 aa32.11■■■□□ 2.73
PITPNM1-211ENST00000528559 DNAJC5BQ9UF47 199 aa30.91■■■□□ 2.54
PITPNM1-211ENST00000528559 RB1CC1Q8TDY2 1594 aa30.79■■■□□ 2.52
PITPNM1-211ENST00000528559 NACADO15069 1562 aa30.48■■■□□ 2.47
PITPNM1-211ENST00000528559 PABPN1Q86U42 306 aaKnown RBP eCLIP30.22■■■□□ 2.43
PITPNM1-211ENST00000528559 DCAF8L2P0C7V8 631 aa30.21■■■□□ 2.43
PITPNM1-211ENST00000528559 UNC13AQ9UPW8 1703 aa30.05■■■□□ 2.4
PITPNM1-211ENST00000528559 MYO15BQ96JP2 1530 aa29.91■■■□□ 2.38
PITPNM1-211ENST00000528559 BICRAQ9NZM4 1560 aa29.89■■■□□ 2.38
PITPNM1-211ENST00000528559 SHROOM4Q9ULL8 1493 aa29.48■■■□□ 2.31
PITPNM1-211ENST00000528559 CC2D2AQ9P2K1 1620 aa29.37■■■□□ 2.29
PITPNM1-211ENST00000528559 ZCCHC6Q5VYS8 1495 aaKnown RBP29.36■■■□□ 2.29
PITPNM1-211ENST00000528559 CECR2Q9BXF3 1484 aa29.36■■■□□ 2.29
PITPNM1-211ENST00000528559 DCAF1Q9Y4B6 1507 aa29.36■■■□□ 2.29
PITPNM1-211ENST00000528559 SCRIBQ14160 1630 aa29.2■■■□□ 2.27
PITPNM1-211ENST00000528559 EIF4G1Q04637 1599 aaKnown RBP29.2■■■□□ 2.26
PITPNM1-211ENST00000528559 DNAJC5Q9H3Z4 198 aa28.74■■■□□ 2.19
PITPNM1-211ENST00000528559 CUX2O14529 1486 aa28.25■■■□□ 2.11
PITPNM1-211ENST00000528559 NCAPD3P42695 1498 aa28.15■■■□□ 2.1
PITPNM1-211ENST00000528559 ERCC6Q03468 1493 aa28.13■■■□□ 2.09
PITPNM1-211ENST00000528559 ATAD2BQ9ULI0 1458 aa27.98■■■□□ 2.07
PITPNM1-211ENST00000528559 SMARCA2P51531 1590 aa27.89■■■□□ 2.05
PITPNM1-211ENST00000528559 HMGXB3Q12766 1538 aa27.88■■■□□ 2.05
PITPNM1-211ENST00000528559 SMARCA4P51532 1647 aa27.83■■■□□ 2.05
PITPNM1-211ENST00000528559 NESP48681 1621 aa27.81■■■□□ 2.04
PITPNM1-211ENST00000528559 BAZ1BQ9UIG0 1483 aaKnown RBP27.68■■■□□ 2.02
PITPNM1-211ENST00000528559 BAZ1AQ9NRL2 1556 aaPredicted RBP27.64■■■□□ 2.01
PITPNM1-211ENST00000528559 THOC2Q8NI27 1593 aaKnown RBP27.62■■■□□ 2.01
PITPNM1-211ENST00000528559 PEG3Q9GZU2 1588 aa27.57■■■□□ 2
PITPNM1-211ENST00000528559 LAMC3Q9Y6N6 1575 aa27.57■■■□□ 2
PITPNM1-211ENST00000528559 PDS5BQ9NTI5 1447 aa27.44■■□□□ 1.98
PITPNM1-211ENST00000528559 KIF21AQ7Z4S6 1674 aa27.44■■□□□ 1.98
PITPNM1-211ENST00000528559 MROH2BQ7Z745 1585 aa27.38■■□□□ 1.97
PITPNM1-211ENST00000528559 TRIM41Q8WV44 630 aa27.29■■□□□ 1.96
PITPNM1-211ENST00000528559 CADPSQ9ULU8 1353 aa27.26■■□□□ 1.95
PITPNM1-211ENST00000528559 MRC2Q9UBG0 1479 aa27.21■■□□□ 1.95
PITPNM1-211ENST00000528559 WDR62O43379 1518 aa27.16■■□□□ 1.94
PITPNM1-211ENST00000528559 WIZO95785 1651 aa27.03■■□□□ 1.92
PITPNM1-211ENST00000528559 CEP164Q9UPV0 1460 aa27.02■■□□□ 1.92
PITPNM1-211ENST00000528559 FANCD2Q9BXW9 1451 aa26.94■■□□□ 1.9
PITPNM1-211ENST00000528559 OSCARQ8IYS5 282 aa26.89■■□□□ 1.9
PITPNM1-211ENST00000528559 CFTRP13569 1480 aa26.85■■□□□ 1.89
PITPNM1-211ENST00000528559 URB2Q14146 1524 aaKnown RBP26.74■■□□□ 1.87
PITPNM1-211ENST00000528559 TOP2AP11388 1531 aaKnown RBP26.67■■□□□ 1.86
PITPNM1-211ENST00000528559 RSF1Q96T23 1441 aaPredicted RBP26.65■■□□□ 1.86
PITPNM1-211ENST00000528559 RIMBP3CA6NJZ7 1639 aa26.56■■□□□ 1.84
PITPNM1-211ENST00000528559 RIMBP3BA6NNM3 1639 aa26.56■■□□□ 1.84
PITPNM1-211ENST00000528559 RIMBP3Q9UFD9 1639 aa26.56■■□□□ 1.84
PITPNM1-211ENST00000528559 PRDM2Q13029 1718 aa26.53■■□□□ 1.84
PITPNM1-211ENST00000528559 IFT140Q96RY7 1462 aa26.49■■□□□ 1.83
PITPNM1-211ENST00000528559 ZNF608Q9ULD9 1512 aaPredicted RBP26.47■■□□□ 1.83
PITPNM1-211ENST00000528559 ARHGEF11O15085 1522 aa26.44■■□□□ 1.82
PITPNM1-211ENST00000528559 TOPBP1Q92547 1522 aa26.38■■□□□ 1.81
PITPNM1-211ENST00000528559 CCDC88BA6NC98 1476 aa26.37■■□□□ 1.81
PITPNM1-211ENST00000528559 ABCC8Q09428 1581 aa26.33■■□□□ 1.8
PITPNM1-211ENST00000528559 EIF4G3O43432 1585 aaKnown RBP26.31■■□□□ 1.8
PITPNM1-211ENST00000528559 CYB5RLQ6IPT4 315 aa26.28■■□□□ 1.8
PITPNM1-211ENST00000528559 DNMBPQ6XZF7 1577 aa26.24■■□□□ 1.79
PITPNM1-211ENST00000528559 CHD1O14646 1710 aa26.19■■□□□ 1.78
PITPNM1-211ENST00000528559 AQRO60306 1485 aaKnown RBP eCLIP26.19■■□□□ 1.781e-9■■□□□ 11.8
PITPNM1-211ENST00000528559 TARBP1Q13395 1621 aaKnown RBP26.18■■□□□ 1.78
PITPNM1-211ENST00000528559 TRHP20396 242 aaPredicted RBP26.14■■□□□ 1.78
PITPNM1-211ENST00000528559 ARAP1Q96P48 1450 aa26.14■■□□□ 1.78
PITPNM1-211ENST00000528559 FBLN2P98095 1184 aa26.12■■□□□ 1.77
PITPNM1-211ENST00000528559 POLA1P09884 1462 aaPredicted RBP26.08■■□□□ 1.77
PITPNM1-211ENST00000528559 RAD54L2Q9Y4B4 1467 aa25.98■■□□□ 1.75
PITPNM1-211ENST00000528559 SOGA1O94964 1423 aa25.97■■□□□ 1.75
PITPNM1-211ENST00000528559 TDRD9Q8NDG6 1382 aaKnown RBP25.96■■□□□ 1.75
PITPNM1-211ENST00000528559 WDR97A6NE52 1622 aa25.91■■□□□ 1.74
PITPNM1-211ENST00000528559 SNAPC4Q5SXM2 1469 aa25.91■■□□□ 1.74
PITPNM1-211ENST00000528559 CLASP1Q7Z460 1538 aa25.9■■□□□ 1.74
PITPNM1-211ENST00000528559 CHMP7Q8WUX9 453 aaPredicted RBP25.87■■□□□ 1.73
PITPNM1-211ENST00000528559 SYNJ1O43426 1573 aa25.86■■□□□ 1.73
PITPNM1-211ENST00000528559 FGD5Q6ZNL6 1462 aa25.85■■□□□ 1.73
PITPNM1-211ENST00000528559 MAGI1Q96QZ7 1491 aaPredicted RBP25.84■■□□□ 1.73
PITPNM1-211ENST00000528559 GRIN2BQ13224 1484 aa25.79■■□□□ 1.72
PITPNM1-211ENST00000528559 SYNJ2O15056 1496 aa25.76■■□□□ 1.71
PITPNM1-211ENST00000528559 CUX1P39880 1505 aa25.75■■□□□ 1.71
PITPNM1-211ENST00000528559 AEBP2Q6ZN18 517 aaPredicted RBP25.73■■□□□ 1.71
PITPNM1-211ENST00000528559 GAPVD1Q14C86 1478 aa25.66■■□□□ 1.7
PITPNM1-211ENST00000528559 PBRM1Q86U86 1689 aa25.64■■□□□ 1.69
PITPNM1-211ENST00000528559 ABCA10Q8WWZ4 1543 aa25.54■■□□□ 1.68
PITPNM1-211ENST00000528559 ABCA5Q8WWZ7 1642 aa25.53■■□□□ 1.68
PITPNM1-211ENST00000528559 GRIN2AQ12879 1464 aa25.45■■□□□ 1.66
PITPNM1-211ENST00000528559 ERCC6L2Q5T890 1561 aa25.44■■□□□ 1.66
PITPNM1-211ENST00000528559 CEP170Q5SW79 1584 aa25.39■■□□□ 1.65
PITPNM1-211ENST00000528559 NUP160Q12769 1436 aa25.38■■□□□ 1.65
PITPNM1-211ENST00000528559 ADAMTS12P58397 1594 aa25.37■■□□□ 1.65
PITPNM1-211ENST00000528559 WRNQ14191 1432 aaPredicted RBP eCLIP25.36■■□□□ 1.65
PITPNM1-211ENST00000528559 SHROOM2Q13796 1616 aa25.32■■□□□ 1.64
PITPNM1-211ENST00000528559 FHAD1B1AJZ9 1412 aa25.3■■□□□ 1.64
PITPNM1-211ENST00000528559 BIVM-ERCC5R4GMW8 1640 aa25.23■■□□□ 1.63
PITPNM1-211ENST00000528559 TOP2BQ02880 1626 aa25.23■■□□□ 1.63
PITPNM1-211ENST00000528559 KIF13AQ9H1H9 1805 aa25.22■■□□□ 1.63
PITPNM1-211ENST00000528559 ERICH3Q5RHP9 1530 aa25.22■■□□□ 1.63
PITPNM1-211ENST00000528559 PRG4Q92954 1404 aaPredicted RBP25.19■■□□□ 1.62
PITPNM1-211ENST00000528559 SUPT5HO00267 1087 aaKnown RBP25.15■■□□□ 1.62
PITPNM1-211ENST00000528559 JPH4Q96JJ6 628 aa25.14■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms