RNA–Protein interactions for RNA: ENST00000528310.1

SNRPCP6-201, Transcript of small nuclear ribonucleoprotein polypeptide C pseudogene 6, humanhuman

BASIC

Gene SNRPCP6, Length 210 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPCP6-201ENST00000528310 NISCHQ9Y2I1 1504 aa16.09■□□□□ 0.17
SNRPCP6-201ENST00000528310 CCDC180Q9P1Z9 1646 aa14.25□□□□□ -0.13
SNRPCP6-201ENST00000528310 ABCC9O60706 1549 aa13.79□□□□□ -0.2
SNRPCP6-201ENST00000528310 ZCCHC6Q5VYS8 1495 aaKnown RBP13.45□□□□□ -0.26
SNRPCP6-201ENST00000528310 DCAF8L2P0C7V8 631 aa13.39□□□□□ -0.27
SNRPCP6-201ENST00000528310 NACADO15069 1562 aa13.36□□□□□ -0.27
SNRPCP6-201ENST00000528310 RB1CC1Q8TDY2 1594 aa13.34□□□□□ -0.27
SNRPCP6-201ENST00000528310 DCAF1Q9Y4B6 1507 aa13.32□□□□□ -0.28
SNRPCP6-201ENST00000528310 MYO15BQ96JP2 1530 aa13.31□□□□□ -0.28
SNRPCP6-201ENST00000528310 SCRIBQ14160 1630 aa13.03□□□□□ -0.32
SNRPCP6-201ENST00000528310 UNC13AQ9UPW8 1703 aa12.98□□□□□ -0.33
SNRPCP6-201ENST00000528310 PABPN1Q86U42 306 aaKnown RBP eCLIP12.9□□□□□ -0.34
SNRPCP6-201ENST00000528310 BICRAQ9NZM4 1560 aa12.88□□□□□ -0.35
SNRPCP6-201ENST00000528310 SHROOM4Q9ULL8 1493 aa12.84□□□□□ -0.35
SNRPCP6-201ENST00000528310 EIF4G1Q04637 1599 aaKnown RBP12.56□□□□□ -0.4
SNRPCP6-201ENST00000528310 CECR2Q9BXF3 1484 aa12.5□□□□□ -0.41
SNRPCP6-201ENST00000528310 BAZ1AQ9NRL2 1556 aaPredicted RBP12.48□□□□□ -0.41
SNRPCP6-201ENST00000528310 CC2D2AQ9P2K1 1620 aa12.47□□□□□ -0.41
SNRPCP6-201ENST00000528310 SMARCA4P51532 1647 aa12.46□□□□□ -0.41
SNRPCP6-201ENST00000528310 DNAJC5BQ9UF47 199 aa12.43□□□□□ -0.42
SNRPCP6-201ENST00000528310 MROH2BQ7Z745 1585 aa12.39□□□□□ -0.43
SNRPCP6-201ENST00000528310 SMARCA2P51531 1590 aa12.36□□□□□ -0.43
SNRPCP6-201ENST00000528310 ATAD2BQ9ULI0 1458 aa12.34□□□□□ -0.43
SNRPCP6-201ENST00000528310 PEG3Q9GZU2 1588 aa12.31□□□□□ -0.44
SNRPCP6-201ENST00000528310 RSF1Q96T23 1441 aaPredicted RBP12.31□□□□□ -0.44
SNRPCP6-201ENST00000528310 NCAPD3P42695 1498 aa12.29□□□□□ -0.44
SNRPCP6-201ENST00000528310 BAZ1BQ9UIG0 1483 aaKnown RBP12.28□□□□□ -0.44
SNRPCP6-201ENST00000528310 HMGXB3Q12766 1538 aa12.28□□□□□ -0.44
SNRPCP6-201ENST00000528310 WIZO95785 1651 aa12.26□□□□□ -0.45
SNRPCP6-201ENST00000528310 TOP2AP11388 1531 aaKnown RBP12.18□□□□□ -0.46
SNRPCP6-201ENST00000528310 SUPT5HO00267 1087 aaKnown RBP12.14□□□□□ -0.47
SNRPCP6-201ENST00000528310 CCDC88BA6NC98 1476 aa12.01□□□□□ -0.49
SNRPCP6-201ENST00000528310 LAMC3Q9Y6N6 1575 aa11.96□□□□□ -0.49
SNRPCP6-201ENST00000528310 CADPSQ9ULU8 1353 aa11.96□□□□□ -0.49
SNRPCP6-201ENST00000528310 NESP48681 1621 aa11.96□□□□□ -0.5
SNRPCP6-201ENST00000528310 CFTRP13569 1480 aa11.92□□□□□ -0.5
SNRPCP6-201ENST00000528310 ERCC6Q03468 1493 aa11.91□□□□□ -0.5
SNRPCP6-201ENST00000528310 PDS5BQ9NTI5 1447 aa11.9□□□□□ -0.5
SNRPCP6-201ENST00000528310 PRDM2Q13029 1718 aa11.85□□□□□ -0.51
SNRPCP6-201ENST00000528310 FANCD2Q9BXW9 1451 aa11.84□□□□□ -0.51
SNRPCP6-201ENST00000528310 CEP164Q9UPV0 1460 aa11.83□□□□□ -0.52
SNRPCP6-201ENST00000528310 KIF21AQ7Z4S6 1674 aa11.82□□□□□ -0.52
SNRPCP6-201ENST00000528310 MRC2Q9UBG0 1479 aa11.77□□□□□ -0.52
SNRPCP6-201ENST00000528310 THOC2Q8NI27 1593 aaKnown RBP11.75□□□□□ -0.53
SNRPCP6-201ENST00000528310 WDR62O43379 1518 aa11.71□□□□□ -0.53
SNRPCP6-201ENST00000528310 URB2Q14146 1524 aaKnown RBP11.7□□□□□ -0.54
SNRPCP6-201ENST00000528310 CUX2O14529 1486 aa11.7□□□□□ -0.54
SNRPCP6-201ENST00000528310 ABCC8Q09428 1581 aa11.68□□□□□ -0.54
SNRPCP6-201ENST00000528310 DNMBPQ6XZF7 1577 aa11.67□□□□□ -0.54
SNRPCP6-201ENST00000528310 TOPBP1Q92547 1522 aa11.66□□□□□ -0.54
SNRPCP6-201ENST00000528310 WRNQ14191 1432 aaPredicted RBP eCLIP11.63□□□□□ -0.55
SNRPCP6-201ENST00000528310 CUX1P39880 1505 aa11.63□□□□□ -0.55
SNRPCP6-201ENST00000528310 SYNJ1O43426 1573 aa11.58□□□□□ -0.55
SNRPCP6-201ENST00000528310 POLA1P09884 1462 aaPredicted RBP11.57□□□□□ -0.56
SNRPCP6-201ENST00000528310 FGD5Q6ZNL6 1462 aa11.57□□□□□ -0.56
SNRPCP6-201ENST00000528310 TOP2BQ02880 1626 aa11.57□□□□□ -0.56
SNRPCP6-201ENST00000528310 IFT140Q96RY7 1462 aa11.57□□□□□ -0.56
SNRPCP6-201ENST00000528310 BIVM-ERCC5R4GMW8 1640 aa11.57□□□□□ -0.56
SNRPCP6-201ENST00000528310 SOGA1O94964 1423 aa11.52□□□□□ -0.56
SNRPCP6-201ENST00000528310 RAD54L2Q9Y4B4 1467 aa11.51□□□□□ -0.57
SNRPCP6-201ENST00000528310 TARBP1Q13395 1621 aaKnown RBP11.5□□□□□ -0.57
SNRPCP6-201ENST00000528310 ZNF608Q9ULD9 1512 aaPredicted RBP11.48□□□□□ -0.57
SNRPCP6-201ENST00000528310 ABCA10Q8WWZ4 1543 aa11.47□□□□□ -0.57
SNRPCP6-201ENST00000528310 TRIM41Q8WV44 630 aa11.47□□□□□ -0.57
SNRPCP6-201ENST00000528310 EIF4G3O43432 1585 aaKnown RBP11.46□□□□□ -0.57
SNRPCP6-201ENST00000528310 WDR97A6NE52 1622 aa11.46□□□□□ -0.58
SNRPCP6-201ENST00000528310 TDRD9Q8NDG6 1382 aaKnown RBP11.43□□□□□ -0.58
SNRPCP6-201ENST00000528310 AQRO60306 1485 aaKnown RBP eCLIP11.43□□□□□ -0.58
SNRPCP6-201ENST00000528310 ABCA5Q8WWZ7 1642 aa11.41□□□□□ -0.58
SNRPCP6-201ENST00000528310 GAPVD1Q14C86 1478 aa11.4□□□□□ -0.58
SNRPCP6-201ENST00000528310 GRIN2BQ13224 1484 aa11.39□□□□□ -0.59
SNRPCP6-201ENST00000528310 CHIC1Q5VXU3 224 aa11.39□□□□□ -0.59
SNRPCP6-201ENST00000528310 KIF27Q86VH2 1401 aa11.39□□□□□ -0.59
SNRPCP6-201ENST00000528310 PBRM1Q86U86 1689 aa11.36□□□□□ -0.59
SNRPCP6-201ENST00000528310 SNAPC4Q5SXM2 1469 aa11.36□□□□□ -0.59
SNRPCP6-201ENST00000528310 MAGI1Q96QZ7 1491 aaPredicted RBP11.35□□□□□ -0.59
SNRPCP6-201ENST00000528310 ERICH3Q5RHP9 1530 aa11.34□□□□□ -0.59
SNRPCP6-201ENST00000528310 ADAMTS12P58397 1594 aa11.31□□□□□ -0.6
SNRPCP6-201ENST00000528310 SYNJ2O15056 1496 aa11.3□□□□□ -0.6
SNRPCP6-201ENST00000528310 FBLN2P98095 1184 aa11.29□□□□□ -0.6
SNRPCP6-201ENST00000528310 FHAD1B1AJZ9 1412 aa11.28□□□□□ -0.6
SNRPCP6-201ENST00000528310 EEA1Q15075 1411 aa11.28□□□□□ -0.6
SNRPCP6-201ENST00000528310 CUL7Q14999 1698 aa11.28□□□□□ -0.6
SNRPCP6-201ENST00000528310 CHMP7Q8WUX9 453 aaPredicted RBP11.28□□□□□ -0.6
SNRPCP6-201ENST00000528310 RUSC2Q8N2Y8 1516 aa11.27□□□□□ -0.61
SNRPCP6-201ENST00000528310 IGF1RP08069 1367 aa11.27□□□□□ -0.61
SNRPCP6-201ENST00000528310 CHD1O14646 1710 aa11.26□□□□□ -0.61
SNRPCP6-201ENST00000528310 GRIN2AQ12879 1464 aa11.24□□□□□ -0.61
SNRPCP6-201ENST00000528310 FAM9AQ8IZU1 332 aaPredicted RBP11.23□□□□□ -0.61
SNRPCP6-201ENST00000528310 DNAJC5Q9H3Z4 198 aa11.23□□□□□ -0.61
SNRPCP6-201ENST00000528310 CARMIL1Q5VZK9 1371 aa11.23□□□□□ -0.61
SNRPCP6-201ENST00000528310 OSCARQ8IYS5 282 aa11.22□□□□□ -0.61
SNRPCP6-201ENST00000528310 CSRNP3Q8WYN3 585 aa11.2□□□□□ -0.62
SNRPCP6-201ENST00000528310 RAPGEF2Q9Y4G8 1499 aa11.19□□□□□ -0.62
SNRPCP6-201ENST00000528310 PRXQ9BXM0 1461 aa11.18□□□□□ -0.62
SNRPCP6-201ENST00000528310 NUP160Q12769 1436 aa11.17□□□□□ -0.62
SNRPCP6-201ENST00000528310 CEP170Q5SW79 1584 aa11.16□□□□□ -0.62
SNRPCP6-201ENST00000528310 CLASP1Q7Z460 1538 aa11.14□□□□□ -0.63
SNRPCP6-201ENST00000528310 KIF21BO75037 1637 aa11.14□□□□□ -0.63
SNRPCP6-201ENST00000528310 KIAA0586Q9BVV6 1533 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms