RNA–Protein interactions for RNA: ENST00000528246.5

MSRA-210, Transcript of methionine sulfoxide reductase A, humanhuman

TSL 1 (best) BASIC

Gene MSRA, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRA-210ENST00000528246 NISCHQ9Y2I1 1504 aa21.12■□□□□ 0.97
MSRA-210ENST00000528246 ABCC9O60706 1549 aa18.49■□□□□ 0.55
MSRA-210ENST00000528246 CCDC180Q9P1Z9 1646 aa18.33■□□□□ 0.53
MSRA-210ENST00000528246 ZCCHC6Q5VYS8 1495 aaKnown RBP17.93■□□□□ 0.46
MSRA-210ENST00000528246 DNAJC5BQ9UF47 199 aa17.86■□□□□ 0.45
MSRA-210ENST00000528246 SHROOM4Q9ULL8 1493 aa17.6■□□□□ 0.41
MSRA-210ENST00000528246 DCAF1Q9Y4B6 1507 aa17.58■□□□□ 0.4
MSRA-210ENST00000528246 RB1CC1Q8TDY2 1594 aa17.44■□□□□ 0.38
MSRA-210ENST00000528246 DCAF8L2P0C7V8 631 aa17.39■□□□□ 0.37
MSRA-210ENST00000528246 SUPT5HO00267 1087 aaKnown RBP17.37■□□□□ 0.37
MSRA-210ENST00000528246 NACADO15069 1562 aa17.32■□□□□ 0.36
MSRA-210ENST00000528246 CHIC1Q5VXU3 224 aa17.18■□□□□ 0.34
MSRA-210ENST00000528246 PABPN1Q86U42 306 aaKnown RBP eCLIP17.12■□□□□ 0.33
MSRA-210ENST00000528246 UNC13AQ9UPW8 1703 aa17.11■□□□□ 0.33
MSRA-210ENST00000528246 MYO15BQ96JP2 1530 aa17.09■□□□□ 0.33
MSRA-210ENST00000528246 BICRAQ9NZM4 1560 aa16.98■□□□□ 0.31
MSRA-210ENST00000528246 HRCP23327 699 aa16.93■□□□□ 0.3
MSRA-210ENST00000528246 SCRIBQ14160 1630 aa16.79■□□□□ 0.28
MSRA-210ENST00000528246 DNAJC5Q9H3Z4 198 aa16.73■□□□□ 0.27
MSRA-210ENST00000528246 CC2D2AQ9P2K1 1620 aa16.72■□□□□ 0.27
MSRA-210ENST00000528246 CECR2Q9BXF3 1484 aa16.71■□□□□ 0.27
MSRA-210ENST00000528246 RSF1Q96T23 1441 aaPredicted RBP16.69■□□□□ 0.26
MSRA-210ENST00000528246 PCGF6Q9BYE7 350 aa16.62■□□□□ 0.25
MSRA-210ENST00000528246 EIF4G1Q04637 1599 aaKnown RBP16.55■□□□□ 0.24
MSRA-210ENST00000528246 TRIM26Q12899 539 aaPredicted RBP16.53■□□□□ 0.24
MSRA-210ENST00000528246 LOC105371045A0A1W2PR82 267 aa16.45■□□□□ 0.22
MSRA-210ENST00000528246 ZEB1P37275 1124 aaPredicted RBP16.39■□□□□ 0.21
MSRA-210ENST00000528246 TRIM41Q8WV44 630 aa16.36■□□□□ 0.21
MSRA-210ENST00000528246 BAZ1AQ9NRL2 1556 aaPredicted RBP16.3■□□□□ 0.2
MSRA-210ENST00000528246 MROH2BQ7Z745 1585 aa16.29■□□□□ 0.2
MSRA-210ENST00000528246 PPARGC1BQ86YN6 1023 aaKnown RBP16.21■□□□□ 0.19
MSRA-210ENST00000528246 WIZO95785 1651 aa16.19■□□□□ 0.18
MSRA-210ENST00000528246 CUX2O14529 1486 aa16.15■□□□□ 0.18
MSRA-210ENST00000528246 TOP2AP11388 1531 aaKnown RBP16.12■□□□□ 0.17
MSRA-210ENST00000528246 SMARCA4P51532 1647 aa16.05■□□□□ 0.16
MSRA-210ENST00000528246 WRNQ14191 1432 aaPredicted RBP eCLIP16.01■□□□□ 0.15
MSRA-210ENST00000528246 EEA1Q15075 1411 aa16■□□□□ 0.15
MSRA-210ENST00000528246 NCAPD3P42695 1498 aa15.99■□□□□ 0.15
MSRA-210ENST00000528246 ATAD2BQ9ULI0 1458 aa15.99■□□□□ 0.15
MSRA-210ENST00000528246 SMARCA2P51531 1590 aa15.97■□□□□ 0.15
MSRA-210ENST00000528246 ERCC6Q03468 1493 aa15.96■□□□□ 0.15
MSRA-210ENST00000528246 FAM9AQ8IZU1 332 aaPredicted RBP15.94■□□□□ 0.14
MSRA-210ENST00000528246 CCDC88BA6NC98 1476 aa15.92■□□□□ 0.14
MSRA-210ENST00000528246 PEG3Q9GZU2 1588 aa15.91■□□□□ 0.14
MSRA-210ENST00000528246 HMGXB3Q12766 1538 aa15.88■□□□□ 0.13
MSRA-210ENST00000528246 TNIKQ9UKE5 1360 aa15.87■□□□□ 0.13
MSRA-210ENST00000528246 BAZ1BQ9UIG0 1483 aaKnown RBP15.85■□□□□ 0.13
MSRA-210ENST00000528246 ABCC8Q09428 1581 aa15.8■□□□□ 0.12
MSRA-210ENST00000528246 PELP1Q8IZL8 1130 aaKnown RBP15.8■□□□□ 0.12
MSRA-210ENST00000528246 CEP162Q5TB80 1403 aa15.79■□□□□ 0.12
MSRA-210ENST00000528246 NESP48681 1621 aa15.77■□□□□ 0.12
MSRA-210ENST00000528246 THOC2Q8NI27 1593 aaKnown RBP15.74■□□□□ 0.11
MSRA-210ENST00000528246 GOLGA3Q08378 1498 aa15.73■□□□□ 0.11
MSRA-210ENST00000528246 CSRNP3Q8WYN3 585 aa15.71■□□□□ 0.1
MSRA-210ENST00000528246 KIF21BO75037 1637 aa15.7■□□□□ 0.1
MSRA-210ENST00000528246 AEBP2Q6ZN18 517 aaPredicted RBP15.7■□□□□ 0.1
MSRA-210ENST00000528246 SOGA1O94964 1423 aa15.69■□□□□ 0.1
MSRA-210ENST00000528246 CEP164Q9UPV0 1460 aa15.66■□□□□ 0.1
MSRA-210ENST00000528246 CCER1Q8TC90 406 aaPredicted RBP15.64■□□□□ 0.09
MSRA-210ENST00000528246 LAMC3Q9Y6N6 1575 aa15.62■□□□□ 0.09
MSRA-210ENST00000528246 KIF21AQ7Z4S6 1674 aa15.58■□□□□ 0.09
MSRA-210ENST00000528246 EHMT2Q96KQ7 1210 aa15.58■□□□□ 0.08
MSRA-210ENST00000528246 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.57■□□□□ 0.08
MSRA-210ENST00000528246 PDS5BQ9NTI5 1447 aa15.55■□□□□ 0.08
MSRA-210ENST00000528246 RUSC2Q8N2Y8 1516 aa15.55■□□□□ 0.08
MSRA-210ENST00000528246 SYNJ1O43426 1573 aa15.55■□□□□ 0.08
MSRA-210ENST00000528246 CADPSQ9ULU8 1353 aa15.54■□□□□ 0.08
MSRA-210ENST00000528246 SCAF1Q9H7N4 1312 aaKnown RBP15.53■□□□□ 0.08
MSRA-210ENST00000528246 VPS8Q8N3P4 1428 aa15.5■□□□□ 0.07
MSRA-210ENST00000528246 UBTFP17480 764 aaKnown RBP15.49■□□□□ 0.07
MSRA-210ENST00000528246 TOP2BQ02880 1626 aa15.49■□□□□ 0.07
MSRA-210ENST00000528246 ACIN1Q9UKV3 1341 aaKnown RBP15.48■□□□□ 0.07
MSRA-210ENST00000528246 CLIP1P30622 1438 aa15.48■□□□□ 0.07
MSRA-210ENST00000528246 DIEXFQ68CQ4 756 aaKnown RBP15.47■□□□□ 0.07
MSRA-210ENST00000528246 BIVM-ERCC5R4GMW8 1640 aa15.47■□□□□ 0.07
MSRA-210ENST00000528246 ERICH3Q5RHP9 1530 aa15.46■□□□□ 0.07
MSRA-210ENST00000528246 CENPBP07199 599 aaPredicted RBP15.46■□□□□ 0.06
MSRA-210ENST00000528246 MRC2Q9UBG0 1479 aa15.4■□□□□ 0.06
MSRA-210ENST00000528246 CLSPNQ9HAW4 1339 aa15.4■□□□□ 0.06
MSRA-210ENST00000528246 ZNF316A6NFI3 1004 aaPredicted RBP15.39■□□□□ 0.05
MSRA-210ENST00000528246 WDR62O43379 1518 aa15.39■□□□□ 0.05
MSRA-210ENST00000528246 CFTRP13569 1480 aa15.37■□□□□ 0.05
MSRA-210ENST00000528246 FANCD2Q9BXW9 1451 aa15.37■□□□□ 0.05
MSRA-210ENST00000528246 PRXQ9BXM0 1461 aa15.36■□□□□ 0.05
MSRA-210ENST00000528246 RAPGEF2Q9Y4G8 1499 aa15.36■□□□□ 0.05
MSRA-210ENST00000528246 NEUROD1Q13562 356 aa15.31■□□□□ 0.04
MSRA-210ENST00000528246 APLP2Q06481 763 aa15.29■□□□□ 0.04
MSRA-210ENST00000528246 OSCARQ8IYS5 282 aa15.29■□□□□ 0.04
MSRA-210ENST00000528246 URB2Q14146 1524 aaKnown RBP15.23■□□□□ 0.03
MSRA-210ENST00000528246 ARAP1Q96P48 1450 aa15.23■□□□□ 0.03
MSRA-210ENST00000528246 KIF27Q86VH2 1401 aa15.22■□□□□ 0.03
MSRA-210ENST00000528246 RIMBP3CA6NJZ7 1639 aa15.22■□□□□ 0.03
MSRA-210ENST00000528246 RIMBP3BA6NNM3 1639 aa15.22■□□□□ 0.03
MSRA-210ENST00000528246 RIMBP3Q9UFD9 1639 aa15.22■□□□□ 0.03
MSRA-210ENST00000528246 RRBP1Q9P2E9 1410 aaKnown RBP15.21■□□□□ 0.03
MSRA-210ENST00000528246 PRDM2Q13029 1718 aa15.21■□□□□ 0.03
MSRA-210ENST00000528246 CUX1P39880 1505 aa15.19■□□□□ 0.02
MSRA-210ENST00000528246 MAP3K1Q13233 1512 aa15.19■□□□□ 0.02
MSRA-210ENST00000528246 GTF3C3Q9Y5Q9 886 aa15.18■□□□□ 0.02
MSRA-210ENST00000528246 TTBK1Q5TCY1 1321 aaPredicted RBP15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 377 ms