RNA–Protein interactions for RNA: ENST00000528200.5

SERGEF-208, Transcript of secretion regulating guanine nucleotide exchange factor, humanhuman

TSL 1 (best) BASIC

Gene SERGEF, Length 1,264 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERGEF-208ENST00000528200 NISCHQ9Y2I1 1504 aa33.22■■■□□ 2.91
SERGEF-208ENST00000528200 CCDC180Q9P1Z9 1646 aa29.38■■■□□ 2.29
SERGEF-208ENST00000528200 ABCC9O60706 1549 aa28.33■■■□□ 2.13
SERGEF-208ENST00000528200 ZCCHC6Q5VYS8 1495 aaKnown RBP27.73■■■□□ 2.03
SERGEF-208ENST00000528200 DCAF8L2P0C7V8 631 aa27.66■■■□□ 2.02
SERGEF-208ENST00000528200 NACADO15069 1562 aa27.56■■■□□ 2
SERGEF-208ENST00000528200 MYO15BQ96JP2 1530 aa27.56■■■□□ 2
SERGEF-208ENST00000528200 DCAF1Q9Y4B6 1507 aa27.56■■■□□ 2
SERGEF-208ENST00000528200 RB1CC1Q8TDY2 1594 aa27.49■■□□□ 1.99
SERGEF-208ENST00000528200 SCRIBQ14160 1630 aa26.76■■□□□ 1.87
SERGEF-208ENST00000528200 UNC13AQ9UPW8 1703 aa26.74■■□□□ 1.87
SERGEF-208ENST00000528200 PABPN1Q86U42 306 aaKnown RBP eCLIP26.55■■□□□ 1.84
SERGEF-208ENST00000528200 BICRAQ9NZM4 1560 aa26.54■■□□□ 1.84
SERGEF-208ENST00000528200 SHROOM4Q9ULL8 1493 aa26.46■■□□□ 1.83
SERGEF-208ENST00000528200 EIF4G1Q04637 1599 aaKnown RBP25.86■■□□□ 1.73
SERGEF-208ENST00000528200 CECR2Q9BXF3 1484 aa25.78■■□□□ 1.72
SERGEF-208ENST00000528200 BAZ1AQ9NRL2 1556 aaPredicted RBP25.76■■□□□ 1.71
SERGEF-208ENST00000528200 SMARCA4P51532 1647 aa25.67■■□□□ 1.7
SERGEF-208ENST00000528200 CC2D2AQ9P2K1 1620 aa25.65■■□□□ 1.7
SERGEF-208ENST00000528200 DNAJC5BQ9UF47 199 aa25.62■■□□□ 1.69
SERGEF-208ENST00000528200 MROH2BQ7Z745 1585 aa25.56■■□□□ 1.68
SERGEF-208ENST00000528200 SMARCA2P51531 1590 aa25.49■■□□□ 1.67
SERGEF-208ENST00000528200 ATAD2BQ9ULI0 1458 aa25.46■■□□□ 1.67
SERGEF-208ENST00000528200 RSF1Q96T23 1441 aaPredicted RBP25.45■■□□□ 1.66
SERGEF-208ENST00000528200 PEG3Q9GZU2 1588 aa25.44■■□□□ 1.66
SERGEF-208ENST00000528200 NCAPD3P42695 1498 aa25.43■■□□□ 1.66
SERGEF-208ENST00000528200 HMGXB3Q12766 1538 aa25.32■■□□□ 1.64
SERGEF-208ENST00000528200 BAZ1BQ9UIG0 1483 aaKnown RBP25.29■■□□□ 1.64
SERGEF-208ENST00000528200 WIZO95785 1651 aa25.29■■□□□ 1.64
SERGEF-208ENST00000528200 SUPT5HO00267 1087 aaKnown RBP25.11■■□□□ 1.61
SERGEF-208ENST00000528200 TOP2AP11388 1531 aaKnown RBP25.1■■□□□ 1.61
SERGEF-208ENST00000528200 CCDC88BA6NC98 1476 aa24.8■■□□□ 1.56
SERGEF-208ENST00000528200 CADPSQ9ULU8 1353 aa24.71■■□□□ 1.55
SERGEF-208ENST00000528200 LAMC3Q9Y6N6 1575 aa24.69■■□□□ 1.54
SERGEF-208ENST00000528200 CFTRP13569 1480 aa24.62■■□□□ 1.53
SERGEF-208ENST00000528200 NESP48681 1621 aa24.59■■□□□ 1.53
SERGEF-208ENST00000528200 PDS5BQ9NTI5 1447 aa24.56■■□□□ 1.52
SERGEF-208ENST00000528200 ERCC6Q03468 1493 aa24.46■■□□□ 1.51
SERGEF-208ENST00000528200 PRDM2Q13029 1718 aa24.42■■□□□ 1.5
SERGEF-208ENST00000528200 FANCD2Q9BXW9 1451 aa24.39■■□□□ 1.5
SERGEF-208ENST00000528200 CEP164Q9UPV0 1460 aa24.34■■□□□ 1.49
SERGEF-208ENST00000528200 KIF21AQ7Z4S6 1674 aa24.31■■□□□ 1.48
SERGEF-208ENST00000528200 MRC2Q9UBG0 1479 aa24.22■■□□□ 1.47
SERGEF-208ENST00000528200 ABCC8Q09428 1581 aa24.17■■□□□ 1.46
SERGEF-208ENST00000528200 THOC2Q8NI27 1593 aaKnown RBP24.15■■□□□ 1.46
SERGEF-208ENST00000528200 WDR62O43379 1518 aa24.1■■□□□ 1.45
SERGEF-208ENST00000528200 URB2Q14146 1524 aaKnown RBP24.08■■□□□ 1.45
SERGEF-208ENST00000528200 CUX2O14529 1486 aa24.07■■□□□ 1.44
SERGEF-208ENST00000528200 DNMBPQ6XZF7 1577 aa24.04■■□□□ 1.44
SERGEF-208ENST00000528200 TOPBP1Q92547 1522 aa24.03■■□□□ 1.44
SERGEF-208ENST00000528200 WRNQ14191 1432 aaPredicted RBP eCLIP24.02■■□□□ 1.44
SERGEF-208ENST00000528200 CUX1P39880 1505 aa23.95■■□□□ 1.43
SERGEF-208ENST00000528200 TOP2BQ02880 1626 aa23.89■■□□□ 1.42
SERGEF-208ENST00000528200 BIVM-ERCC5R4GMW8 1640 aa23.87■■□□□ 1.41
SERGEF-208ENST00000528200 POLA1P09884 1462 aaPredicted RBP23.85■■□□□ 1.41
SERGEF-208ENST00000528200 FGD5Q6ZNL6 1462 aa23.85■■□□□ 1.41
SERGEF-208ENST00000528200 SYNJ1O43426 1573 aa23.85■■□□□ 1.41
SERGEF-208ENST00000528200 IFT140Q96RY7 1462 aa23.84■■□□□ 1.41
SERGEF-208ENST00000528200 SOGA1O94964 1423 aa23.81■■□□□ 1.4
SERGEF-208ENST00000528200 TRIM41Q8WV44 630 aa23.77■■□□□ 1.4
SERGEF-208ENST00000528200 TARBP1Q13395 1621 aaKnown RBP23.71■■□□□ 1.39
SERGEF-208ENST00000528200 RAD54L2Q9Y4B4 1467 aa23.71■■□□□ 1.39
SERGEF-208ENST00000528200 ABCA10Q8WWZ4 1543 aa23.66■■□□□ 1.38
SERGEF-208ENST00000528200 CHIC1Q5VXU3 224 aa23.66■■□□□ 1.38
SERGEF-208ENST00000528200 WDR97A6NE52 1622 aa23.65■■□□□ 1.38
SERGEF-208ENST00000528200 ZNF608Q9ULD9 1512 aaPredicted RBP23.6■■□□□ 1.37
SERGEF-208ENST00000528200 TDRD9Q8NDG6 1382 aaKnown RBP23.59■■□□□ 1.37
SERGEF-208ENST00000528200 AQRO60306 1485 aaKnown RBP eCLIP23.56■■□□□ 1.36
SERGEF-208ENST00000528200 EIF4G3O43432 1585 aaKnown RBP23.53■■□□□ 1.36
SERGEF-208ENST00000528200 GAPVD1Q14C86 1478 aa23.53■■□□□ 1.36
SERGEF-208ENST00000528200 KIF27Q86VH2 1401 aa23.52■■□□□ 1.36
SERGEF-208ENST00000528200 GRIN2BQ13224 1484 aa23.49■■□□□ 1.35
SERGEF-208ENST00000528200 ABCA5Q8WWZ7 1642 aa23.48■■□□□ 1.35
SERGEF-208ENST00000528200 ERICH3Q5RHP9 1530 aa23.4■■□□□ 1.34
SERGEF-208ENST00000528200 MAGI1Q96QZ7 1491 aaPredicted RBP23.39■■□□□ 1.34
SERGEF-208ENST00000528200 PBRM1Q86U86 1689 aa23.38■■□□□ 1.33
SERGEF-208ENST00000528200 EEA1Q15075 1411 aa23.37■■□□□ 1.33
SERGEF-208ENST00000528200 IGF1RP08069 1367 aa23.34■■□□□ 1.33
SERGEF-208ENST00000528200 SNAPC4Q5SXM2 1469 aa23.34■■□□□ 1.33
SERGEF-208ENST00000528200 CHMP7Q8WUX9 453 aaPredicted RBP23.3■■□□□ 1.32
SERGEF-208ENST00000528200 FHAD1B1AJZ9 1412 aa23.29■■□□□ 1.32
SERGEF-208ENST00000528200 SYNJ2O15056 1496 aa23.29■■□□□ 1.32
SERGEF-208ENST00000528200 RUSC2Q8N2Y8 1516 aa23.28■■□□□ 1.32
SERGEF-208ENST00000528200 FBLN2P98095 1184 aa23.27■■□□□ 1.32
SERGEF-208ENST00000528200 CUL7Q14999 1698 aa23.26■■□□□ 1.31
SERGEF-208ENST00000528200 CSRNP3Q8WYN3 585 aa23.26■■□□□ 1.31
SERGEF-208ENST00000528200 ADAMTS12P58397 1594 aa23.23■■□□□ 1.31
SERGEF-208ENST00000528200 CARMIL1Q5VZK9 1371 aa23.23■■□□□ 1.31
SERGEF-208ENST00000528200 OSCARQ8IYS5 282 aa23.21■■□□□ 1.31
SERGEF-208ENST00000528200 FAM9AQ8IZU1 332 aaPredicted RBP23.18■■□□□ 1.3
SERGEF-208ENST00000528200 GRIN2AQ12879 1464 aa23.16■■□□□ 1.3
SERGEF-208ENST00000528200 CHD1O14646 1710 aa23.15■■□□□ 1.3
SERGEF-208ENST00000528200 RAPGEF2Q9Y4G8 1499 aa23.13■■□□□ 1.29
SERGEF-208ENST00000528200 PRXQ9BXM0 1461 aa23.11■■□□□ 1.29
SERGEF-208ENST00000528200 NUP160Q12769 1436 aa23.04■■□□□ 1.28
SERGEF-208ENST00000528200 KIF21BO75037 1637 aa23■■□□□ 1.27
SERGEF-208ENST00000528200 CEP170Q5SW79 1584 aa22.97■■□□□ 1.27
SERGEF-208ENST00000528200 KIAA0586Q9BVV6 1533 aa22.95■■□□□ 1.26
SERGEF-208ENST00000528200 CLASP1Q7Z460 1538 aa22.93■■□□□ 1.26
SERGEF-208ENST00000528200 GOLGA3Q08378 1498 aa22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms