RNA–Protein interactions for RNA: ENST00000527944.1

NCAPD3-206, Transcript of non-SMC condensin II complex subunit D3, humanhuman

APPRIS ALT2 TSL 2

Gene NCAPD3, Length 773 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3-206ENST00000527944 AEBP2Q6ZN18 517 aaPredicted RBP26.01■■□□□ 1.75
NCAPD3-206ENST00000527944 CHIC1Q5VXU3 224 aa25.64■■□□□ 1.7
NCAPD3-206ENST00000527944 NISCHQ9Y2I1 1504 aa24.34■■□□□ 1.49
NCAPD3-206ENST00000527944 PHF23Q9BUL5 403 aaPredicted RBP22.49■■□□□ 1.19
NCAPD3-206ENST00000527944 SENP3Q9H4L4 574 aaPredicted RBP22.17■■□□□ 1.14
NCAPD3-206ENST00000527944 CCDC180Q9P1Z9 1646 aa21.32■■□□□ 1
NCAPD3-206ENST00000527944 PLPPR3Q6T4P5 718 aa20.94■□□□□ 0.94
NCAPD3-206ENST00000527944 ZCCHC6Q5VYS8 1495 aaKnown RBP20.5■□□□□ 0.87
NCAPD3-206ENST00000527944 FOXD1Q16676 465 aa20.48■□□□□ 0.87
NCAPD3-206ENST00000527944 DCAF1Q9Y4B6 1507 aa20.17■□□□□ 0.82
NCAPD3-206ENST00000527944 DCAF8L2P0C7V8 631 aa19.99■□□□□ 0.79
NCAPD3-206ENST00000527944 ABCC9O60706 1549 aa19.92■□□□□ 0.78
NCAPD3-206ENST00000527944 MYO15BQ96JP2 1530 aa19.91■□□□□ 0.78
NCAPD3-206ENST00000527944 SHROOM4Q9ULL8 1493 aa19.86■□□□□ 0.77
NCAPD3-206ENST00000527944 ADRA2BP18089 450 aa19.8■□□□□ 0.76
NCAPD3-206ENST00000527944 PPP6R1Q9UPN7 881 aa19.79■□□□□ 0.76
NCAPD3-206ENST00000527944 NACADO15069 1562 aa19.78■□□□□ 0.76
NCAPD3-206ENST00000527944 RB1CC1Q8TDY2 1594 aa19.61■□□□□ 0.73
NCAPD3-206ENST00000527944 SCRIBQ14160 1630 aa19.54■□□□□ 0.72
NCAPD3-206ENST00000527944 PIAS4Q8N2W9 510 aaPredicted RBP19.39■□□□□ 0.69
NCAPD3-206ENST00000527944 UNC13AQ9UPW8 1703 aa19.18■□□□□ 0.66
NCAPD3-206ENST00000527944 SUPT5HO00267 1087 aaKnown RBP19.14■□□□□ 0.65
NCAPD3-206ENST00000527944 MSH5O43196 834 aa18.92■□□□□ 0.62
NCAPD3-206ENST00000527944 BICRAQ9NZM4 1560 aa18.89■□□□□ 0.62
NCAPD3-206ENST00000527944 BAZ1AQ9NRL2 1556 aaPredicted RBP18.85■□□□□ 0.61
NCAPD3-206ENST00000527944 RSF1Q96T23 1441 aaPredicted RBP18.85■□□□□ 0.61
NCAPD3-206ENST00000527944 CECR2Q9BXF3 1484 aa18.83■□□□□ 0.6
NCAPD3-206ENST00000527944 MROH2BQ7Z745 1585 aa18.76■□□□□ 0.59
NCAPD3-206ENST00000527944 SMARCA4P51532 1647 aa18.74■□□□□ 0.59
NCAPD3-206ENST00000527944 PABPN1Q86U42 306 aaKnown RBP eCLIP18.72■□□□□ 0.59
NCAPD3-206ENST00000527944 WIZO95785 1651 aa18.66■□□□□ 0.58
NCAPD3-206ENST00000527944 TOP2AP11388 1531 aaKnown RBP18.54■□□□□ 0.56
NCAPD3-206ENST00000527944 PEG3Q9GZU2 1588 aa18.5■□□□□ 0.55
NCAPD3-206ENST00000527944 SMARCA2P51531 1590 aa18.43■□□□□ 0.54
NCAPD3-206ENST00000527944 PPP4R3CPQ6ZMV5 832 aa18.43■□□□□ 0.54
NCAPD3-206ENST00000527944 EIF4G1Q04637 1599 aaKnown RBP18.37■□□□□ 0.53
NCAPD3-206ENST00000527944 ATAD2BQ9ULI0 1458 aa18.34■□□□□ 0.53
NCAPD3-206ENST00000527944 BAZ1BQ9UIG0 1483 aaKnown RBP18.31■□□□□ 0.52
NCAPD3-206ENST00000527944 SCAF1Q9H7N4 1312 aaKnown RBP18.27■□□□□ 0.52
NCAPD3-206ENST00000527944 CCDC88BA6NC98 1476 aa18.25■□□□□ 0.51
NCAPD3-206ENST00000527944 HMGXB3Q12766 1538 aa18.24■□□□□ 0.51
NCAPD3-206ENST00000527944 NCAPD3P42695 1498 aa18.16■□□□□ 0.5
NCAPD3-206ENST00000527944 KCNA4P22459 653 aa18.13■□□□□ 0.49
NCAPD3-206ENST00000527944 NCBP3Q53F19 620 aaKnown RBP18.08■□□□□ 0.48
NCAPD3-206ENST00000527944 CC2D2AQ9P2K1 1620 aa18.08■□□□□ 0.48
NCAPD3-206ENST00000527944 TRIM41Q8WV44 630 aa18.03■□□□□ 0.48
NCAPD3-206ENST00000527944 CNKSR2Q8WXI2 1034 aa17.92■□□□□ 0.46
NCAPD3-206ENST00000527944 ABCC8Q09428 1581 aa17.91■□□□□ 0.46
NCAPD3-206ENST00000527944 PRDM2Q13029 1718 aa17.89■□□□□ 0.46
NCAPD3-206ENST00000527944 MAPK8IP2Q13387 824 aaPredicted RBP17.89■□□□□ 0.45
NCAPD3-206ENST00000527944 WRNQ14191 1432 aaPredicted RBP eCLIP17.81■□□□□ 0.44
NCAPD3-206ENST00000527944 CFTRP13569 1480 aa17.8■□□□□ 0.44
NCAPD3-206ENST00000527944 SYNJ1O43426 1573 aa17.74■□□□□ 0.43
NCAPD3-206ENST00000527944 NPM3O75607 178 aaKnown RBP17.71■□□□□ 0.43
NCAPD3-206ENST00000527944 BIVM-ERCC5R4GMW8 1640 aa17.71■□□□□ 0.43
NCAPD3-206ENST00000527944 CADPSQ9ULU8 1353 aa17.7■□□□□ 0.42
NCAPD3-206ENST00000527944 DMRT2Q9Y5R5 561 aa17.7■□□□□ 0.42
NCAPD3-206ENST00000527944 TOP2BQ02880 1626 aa17.69■□□□□ 0.42
NCAPD3-206ENST00000527944 EEA1Q15075 1411 aa17.69■□□□□ 0.42
NCAPD3-206ENST00000527944 FAM9AQ8IZU1 332 aaPredicted RBP17.66■□□□□ 0.42
NCAPD3-206ENST00000527944 LAMC3Q9Y6N6 1575 aa17.63■□□□□ 0.41
NCAPD3-206ENST00000527944 LOC105371045A0A1W2PR82 267 aa17.58■□□□□ 0.4
NCAPD3-206ENST00000527944 CUX1P39880 1505 aa17.57■□□□□ 0.4
NCAPD3-206ENST00000527944 FANCD2Q9BXW9 1451 aa17.55■□□□□ 0.4
NCAPD3-206ENST00000527944 SOGA1O94964 1423 aa17.54■□□□□ 0.4
NCAPD3-206ENST00000527944 RNF216Q9NWF9 866 aaPredicted RBP17.53■□□□□ 0.4
NCAPD3-206ENST00000527944 NESP48681 1621 aa17.48■□□□□ 0.39
NCAPD3-206ENST00000527944 CEP164Q9UPV0 1460 aa17.48■□□□□ 0.39
NCAPD3-206ENST00000527944 DNMBPQ6XZF7 1577 aa17.46■□□□□ 0.39
NCAPD3-206ENST00000527944 PDS5BQ9NTI5 1447 aa17.46■□□□□ 0.39
NCAPD3-206ENST00000527944 CSRNP3Q8WYN3 585 aa17.45■□□□□ 0.38
NCAPD3-206ENST00000527944 KIF21BO75037 1637 aa17.45■□□□□ 0.38
NCAPD3-206ENST00000527944 RUSC2Q8N2Y8 1516 aa17.44■□□□□ 0.38
NCAPD3-206ENST00000527944 GOLGA3Q08378 1498 aa17.44■□□□□ 0.38
NCAPD3-206ENST00000527944 KIF21AQ7Z4S6 1674 aa17.39■□□□□ 0.37
NCAPD3-206ENST00000527944 FGD5Q6ZNL6 1462 aa17.39■□□□□ 0.37
NCAPD3-206ENST00000527944 HOXD11P31277 338 aaPredicted RBP17.39■□□□□ 0.37
NCAPD3-206ENST00000527944 KIF27Q86VH2 1401 aa17.38■□□□□ 0.37
NCAPD3-206ENST00000527944 EHMT2Q96KQ7 1210 aa17.38■□□□□ 0.37
NCAPD3-206ENST00000527944 TOPBP1Q92547 1522 aa17.37■□□□□ 0.37
NCAPD3-206ENST00000527944 SLC4A1APQ9BWU0 796 aaKnown RBP17.36■□□□□ 0.37
NCAPD3-206ENST00000527944 TNIKQ9UKE5 1360 aa17.33■□□□□ 0.36
NCAPD3-206ENST00000527944 ERICH3Q5RHP9 1530 aa17.31■□□□□ 0.36
NCAPD3-206ENST00000527944 DNAJC5BQ9UF47 199 aa17.3■□□□□ 0.36
NCAPD3-206ENST00000527944 CUX2O14529 1486 aa17.3■□□□□ 0.36
NCAPD3-206ENST00000527944 URB2Q14146 1524 aaKnown RBP17.29■□□□□ 0.36
NCAPD3-206ENST00000527944 POLA1P09884 1462 aaPredicted RBP17.28■□□□□ 0.36
NCAPD3-206ENST00000527944 UBTFP17480 764 aaKnown RBP17.26■□□□□ 0.35
NCAPD3-206ENST00000527944 CEP162Q5TB80 1403 aa17.25■□□□□ 0.35
NCAPD3-206ENST00000527944 ABCA10Q8WWZ4 1543 aa17.25■□□□□ 0.35
NCAPD3-206ENST00000527944 WDR97A6NE52 1622 aa17.25■□□□□ 0.35
NCAPD3-206ENST00000527944 MRC2Q9UBG0 1479 aa17.24■□□□□ 0.35
NCAPD3-206ENST00000527944 PRXQ9BXM0 1461 aa17.23■□□□□ 0.35
NCAPD3-206ENST00000527944 RAPGEF2Q9Y4G8 1499 aa17.22■□□□□ 0.35
NCAPD3-206ENST00000527944 RAD54L2Q9Y4B4 1467 aa17.18■□□□□ 0.34
NCAPD3-206ENST00000527944 CUL7Q14999 1698 aa17.17■□□□□ 0.34
NCAPD3-206ENST00000527944 ERCC6Q03468 1493 aa17.16■□□□□ 0.34
NCAPD3-206ENST00000527944 WDR62O43379 1518 aa17.14■□□□□ 0.33
NCAPD3-206ENST00000527944 ABCA5Q8WWZ7 1642 aa17.14■□□□□ 0.33
NCAPD3-206ENST00000527944 CLIP1P30622 1438 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms