RNA–Protein interactions for RNA: ENST00000527744.5

PUF60-211, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 2

Gene PUF60, Length 1,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-211ENST00000527744 NISCHQ9Y2I1 1504 aa33.17■■■□□ 2.9
PUF60-211ENST00000527744 ABCC9O60706 1549 aa30.48■■■□□ 2.47
PUF60-211ENST00000527744 CCDC180Q9P1Z9 1646 aa30.01■■■□□ 2.39
PUF60-211ENST00000527744 DNAJC5BQ9UF47 199 aa29.12■■■□□ 2.25
PUF60-211ENST00000527744 RB1CC1Q8TDY2 1594 aa28.8■■■□□ 2.2
PUF60-211ENST00000527744 NACADO15069 1562 aa28.49■■■□□ 2.15
PUF60-211ENST00000527744 PABPN1Q86U42 306 aaKnown RBP eCLIP28.3■■■□□ 2.122e-7■■□□□ 13.7
PUF60-211ENST00000527744 UNC13AQ9UPW8 1703 aa28.21■■■□□ 2.11
PUF60-211ENST00000527744 DCAF8L2P0C7V8 631 aa28.15■■■□□ 2.1
PUF60-211ENST00000527744 BICRAQ9NZM4 1560 aa28.03■■■□□ 2.08
PUF60-211ENST00000527744 MYO15BQ96JP2 1530 aa27.94■■■□□ 2.06
PUF60-211ENST00000527744 SHROOM4Q9ULL8 1493 aa27.57■■■□□ 2
PUF60-211ENST00000527744 CC2D2AQ9P2K1 1620 aa27.54■■■□□ 2
PUF60-211ENST00000527744 CECR2Q9BXF3 1484 aa27.53■■■□□ 2
PUF60-211ENST00000527744 DCAF1Q9Y4B6 1507 aa27.38■■□□□ 1.97
PUF60-211ENST00000527744 ZCCHC6Q5VYS8 1495 aaKnown RBP27.37■■□□□ 1.97
PUF60-211ENST00000527744 EIF4G1Q04637 1599 aaKnown RBP27.35■■□□□ 1.97
PUF60-211ENST00000527744 SCRIBQ14160 1630 aa27.27■■□□□ 1.96
PUF60-211ENST00000527744 DNAJC5Q9H3Z4 198 aa27.13■■□□□ 1.93
PUF60-211ENST00000527744 CUX2O14529 1486 aa26.51■■□□□ 1.83
PUF60-211ENST00000527744 ERCC6Q03468 1493 aa26.34■■□□□ 1.81
PUF60-211ENST00000527744 NCAPD3P42695 1498 aa26.31■■□□□ 1.8
PUF60-211ENST00000527744 ATAD2BQ9ULI0 1458 aa26.15■■□□□ 1.78
PUF60-211ENST00000527744 NESP48681 1621 aa26.06■■□□□ 1.76
PUF60-211ENST00000527744 HMGXB3Q12766 1538 aa26.06■■□□□ 1.76
PUF60-211ENST00000527744 SMARCA2P51531 1590 aa26.03■■□□□ 1.76
PUF60-211ENST00000527744 SMARCA4P51532 1647 aa25.99■■□□□ 1.75
PUF60-211ENST00000527744 THOC2Q8NI27 1593 aaKnown RBP25.92■■□□□ 1.74
PUF60-211ENST00000527744 BAZ1BQ9UIG0 1483 aaKnown RBP25.84■■□□□ 1.73
PUF60-211ENST00000527744 LAMC3Q9Y6N6 1575 aa25.8■■□□□ 1.72
PUF60-211ENST00000527744 PEG3Q9GZU2 1588 aa25.77■■□□□ 1.72
PUF60-211ENST00000527744 BAZ1AQ9NRL2 1556 aaPredicted RBP25.77■■□□□ 1.72
PUF60-211ENST00000527744 KIF21AQ7Z4S6 1674 aa25.73■■□□□ 1.71
PUF60-211ENST00000527744 TRIM41Q8WV44 630 aa25.65■■□□□ 1.7
PUF60-211ENST00000527744 PDS5BQ9NTI5 1447 aa25.64■■□□□ 1.7
PUF60-211ENST00000527744 MROH2BQ7Z745 1585 aa25.55■■□□□ 1.68
PUF60-211ENST00000527744 CADPSQ9ULU8 1353 aa25.47■■□□□ 1.67
PUF60-211ENST00000527744 MRC2Q9UBG0 1479 aa25.46■■□□□ 1.67
PUF60-211ENST00000527744 WDR62O43379 1518 aa25.43■■□□□ 1.66
PUF60-211ENST00000527744 CEP164Q9UPV0 1460 aa25.24■■□□□ 1.63
PUF60-211ENST00000527744 WIZO95785 1651 aa25.22■■□□□ 1.63
PUF60-211ENST00000527744 OSCARQ8IYS5 282 aa25.2■■□□□ 1.62
PUF60-211ENST00000527744 FANCD2Q9BXW9 1451 aa25.17■■□□□ 1.62
PUF60-211ENST00000527744 CFTRP13569 1480 aa25.08■■□□□ 1.6
PUF60-211ENST00000527744 URB2Q14146 1524 aaKnown RBP25.02■■□□□ 1.6
PUF60-211ENST00000527744 RIMBP3CA6NJZ7 1639 aa24.96■■□□□ 1.59
PUF60-211ENST00000527744 RIMBP3BA6NNM3 1639 aa24.96■■□□□ 1.59
PUF60-211ENST00000527744 RIMBP3Q9UFD9 1639 aa24.96■■□□□ 1.59
PUF60-211ENST00000527744 TOP2AP11388 1531 aaKnown RBP24.85■■□□□ 1.57
PUF60-211ENST00000527744 RSF1Q96T23 1441 aaPredicted RBP24.82■■□□□ 1.56
PUF60-211ENST00000527744 ARHGEF11O15085 1522 aa24.81■■□□□ 1.56
PUF60-211ENST00000527744 PRDM2Q13029 1718 aa24.81■■□□□ 1.56
PUF60-211ENST00000527744 ZNF608Q9ULD9 1512 aaPredicted RBP24.79■■□□□ 1.56
PUF60-211ENST00000527744 IFT140Q96RY7 1462 aa24.77■■□□□ 1.56
PUF60-211ENST00000527744 TOPBP1Q92547 1522 aa24.65■■□□□ 1.54
PUF60-211ENST00000527744 CYB5RLQ6IPT4 315 aa24.64■■□□□ 1.54
PUF60-211ENST00000527744 EIF4G3O43432 1585 aaKnown RBP24.63■■□□□ 1.53
PUF60-211ENST00000527744 CCDC88BA6NC98 1476 aa24.58■■□□□ 1.52
PUF60-211ENST00000527744 CHD1O14646 1710 aa24.57■■□□□ 1.52
PUF60-211ENST00000527744 ABCC8Q09428 1581 aa24.55■■□□□ 1.52
PUF60-211ENST00000527744 ARAP1Q96P48 1450 aa24.54■■□□□ 1.52
PUF60-211ENST00000527744 DNMBPQ6XZF7 1577 aa24.51■■□□□ 1.51
PUF60-211ENST00000527744 TRHP20396 242 aaPredicted RBP24.51■■□□□ 1.51
PUF60-211ENST00000527744 TARBP1Q13395 1621 aaKnown RBP24.5■■□□□ 1.51
PUF60-211ENST00000527744 AQRO60306 1485 aaKnown RBP eCLIP24.49■■□□□ 1.511e-6■■■■■ 58
PUF60-211ENST00000527744 FBLN2P98095 1184 aa24.39■■□□□ 1.49
PUF60-211ENST00000527744 POLA1P09884 1462 aaPredicted RBP24.36■■□□□ 1.49
PUF60-211ENST00000527744 RAD54L2Q9Y4B4 1467 aa24.28■■□□□ 1.48
PUF60-211ENST00000527744 CLASP1Q7Z460 1538 aa24.27■■□□□ 1.48
PUF60-211ENST00000527744 TDRD9Q8NDG6 1382 aaKnown RBP24.25■■□□□ 1.47
PUF60-211ENST00000527744 SOGA1O94964 1423 aa24.23■■□□□ 1.47
PUF60-211ENST00000527744 SNAPC4Q5SXM2 1469 aa24.21■■□□□ 1.47
PUF60-211ENST00000527744 WDR97A6NE52 1622 aa24.2■■□□□ 1.46
PUF60-211ENST00000527744 AEBP2Q6ZN18 517 aaPredicted RBP24.18■■□□□ 1.46
PUF60-211ENST00000527744 SYNJ1O43426 1573 aa24.17■■□□□ 1.46
PUF60-211ENST00000527744 CHMP7Q8WUX9 453 aaPredicted RBP24.15■■□□□ 1.46
PUF60-211ENST00000527744 MAGI1Q96QZ7 1491 aaPredicted RBP24.14■■□□□ 1.46
PUF60-211ENST00000527744 FGD5Q6ZNL6 1462 aa24.13■■□□□ 1.45
PUF60-211ENST00000527744 GRIN2BQ13224 1484 aa24.08■■□□□ 1.45
PUF60-211ENST00000527744 SYNJ2O15056 1496 aa24.07■■□□□ 1.44
PUF60-211ENST00000527744 CUX1P39880 1505 aa24.03■■□□□ 1.44
PUF60-211ENST00000527744 GAPVD1Q14C86 1478 aa24.02■■□□□ 1.44
PUF60-211ENST00000527744 PBRM1Q86U86 1689 aa23.97■■□□□ 1.43
PUF60-211ENST00000527744 ABCA5Q8WWZ7 1642 aa23.85■■□□□ 1.41
PUF60-211ENST00000527744 ERCC6L2Q5T890 1561 aa23.85■■□□□ 1.41
PUF60-211ENST00000527744 ABCA10Q8WWZ4 1543 aa23.83■■□□□ 1.41
PUF60-211ENST00000527744 GRIN2AQ12879 1464 aa23.78■■□□□ 1.4
PUF60-211ENST00000527744 CEP170Q5SW79 1584 aa23.76■■□□□ 1.39
PUF60-211ENST00000527744 NUP160Q12769 1436 aa23.74■■□□□ 1.39
PUF60-211ENST00000527744 KIF13AQ9H1H9 1805 aa23.71■■□□□ 1.39
PUF60-211ENST00000527744 SHROOM2Q13796 1616 aa23.71■■□□□ 1.39
PUF60-211ENST00000527744 ADAMTS12P58397 1594 aa23.7■■□□□ 1.38
PUF60-211ENST00000527744 WRNQ14191 1432 aaPredicted RBP eCLIP23.61■■□□□ 1.37
PUF60-211ENST00000527744 FHAD1B1AJZ9 1412 aa23.6■■□□□ 1.37
PUF60-211ENST00000527744 BIVM-ERCC5R4GMW8 1640 aa23.52■■□□□ 1.36
PUF60-211ENST00000527744 PRG4Q92954 1404 aaPredicted RBP23.52■■□□□ 1.36
PUF60-211ENST00000527744 ERICH3Q5RHP9 1530 aa23.52■■□□□ 1.36
PUF60-211ENST00000527744 TOP2BQ02880 1626 aa23.51■■□□□ 1.35
PUF60-211ENST00000527744 ABCC10Q5T3U5 1492 aa23.48■■□□□ 1.35
PUF60-211ENST00000527744 JPH4Q96JJ6 628 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms