RNA–Protein interactions for RNA: ENST00000527290.1

SPCS2-205, Transcript of signal peptidase complex subunit 2, humanhuman

TSL 2

Gene SPCS2, Length 265 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS2-205ENST00000527290 NISCHQ9Y2I1 1504 aa35.88■■■■□ 3.33
SPCS2-205ENST00000527290 CCDC180Q9P1Z9 1646 aa31.86■■■□□ 2.69
SPCS2-205ENST00000527290 ABCC9O60706 1549 aa31.5■■■□□ 2.63
SPCS2-205ENST00000527290 DCAF8L2P0C7V8 631 aa30.19■■■□□ 2.42
SPCS2-205ENST00000527290 RB1CC1Q8TDY2 1594 aa30.18■■■□□ 2.42
SPCS2-205ENST00000527290 NACADO15069 1562 aa30.11■■■□□ 2.41
SPCS2-205ENST00000527290 MYO15BQ96JP2 1530 aa29.9■■■□□ 2.38
SPCS2-205ENST00000527290 ZCCHC6Q5VYS8 1495 aaKnown RBP29.81■■■□□ 2.36
SPCS2-205ENST00000527290 DCAF1Q9Y4B6 1507 aa29.67■■■□□ 2.34
SPCS2-205ENST00000527290 PABPN1Q86U42 306 aaKnown RBP eCLIP29.49■■■□□ 2.31
SPCS2-205ENST00000527290 UNC13AQ9UPW8 1703 aa29.28■■■□□ 2.28
SPCS2-205ENST00000527290 BICRAQ9NZM4 1560 aa29.22■■■□□ 2.27
SPCS2-205ENST00000527290 DNAJC5BQ9UF47 199 aa29.16■■■□□ 2.26
SPCS2-205ENST00000527290 SCRIBQ14160 1630 aa29.09■■■□□ 2.25
SPCS2-205ENST00000527290 SHROOM4Q9ULL8 1493 aa28.99■■■□□ 2.23
SPCS2-205ENST00000527290 EIF4G1Q04637 1599 aaKnown RBP28.51■■■□□ 2.15
SPCS2-205ENST00000527290 CC2D2AQ9P2K1 1620 aa28.42■■■□□ 2.14
SPCS2-205ENST00000527290 CECR2Q9BXF3 1484 aa28.35■■■□□ 2.13
SPCS2-205ENST00000527290 NCAPD3P42695 1498 aa27.84■■■□□ 2.05
SPCS2-205ENST00000527290 ATAD2BQ9ULI0 1458 aa27.81■■■□□ 2.04
SPCS2-205ENST00000527290 BAZ1AQ9NRL2 1556 aaPredicted RBP27.81■■■□□ 2.04
SPCS2-205ENST00000527290 SMARCA4P51532 1647 aa27.81■■■□□ 2.04
SPCS2-205ENST00000527290 SMARCA2P51531 1590 aa27.73■■■□□ 2.03
SPCS2-205ENST00000527290 MROH2BQ7Z745 1585 aa27.62■■■□□ 2.01
SPCS2-205ENST00000527290 HMGXB3Q12766 1538 aa27.61■■■□□ 2.01
SPCS2-205ENST00000527290 PEG3Q9GZU2 1588 aa27.57■■■□□ 2
SPCS2-205ENST00000527290 BAZ1BQ9UIG0 1483 aaKnown RBP27.56■■■□□ 2
SPCS2-205ENST00000527290 RSF1Q96T23 1441 aaPredicted RBP27.3■■□□□ 1.96
SPCS2-205ENST00000527290 WIZO95785 1651 aa27.24■■□□□ 1.95
SPCS2-205ENST00000527290 ERCC6Q03468 1493 aa27.2■■□□□ 1.95
SPCS2-205ENST00000527290 NESP48681 1621 aa27.17■■□□□ 1.94
SPCS2-205ENST00000527290 LAMC3Q9Y6N6 1575 aa27.06■■□□□ 1.92
SPCS2-205ENST00000527290 CADPSQ9ULU8 1353 aa27.06■■□□□ 1.92
SPCS2-205ENST00000527290 PDS5BQ9NTI5 1447 aa27■■□□□ 1.91
SPCS2-205ENST00000527290 TOP2AP11388 1531 aaKnown RBP27■■□□□ 1.91
SPCS2-205ENST00000527290 CUX2O14529 1486 aa26.97■■□□□ 1.91
SPCS2-205ENST00000527290 CFTRP13569 1480 aa26.81■■□□□ 1.88
SPCS2-205ENST00000527290 CCDC88BA6NC98 1476 aa26.74■■□□□ 1.87
SPCS2-205ENST00000527290 THOC2Q8NI27 1593 aaKnown RBP26.72■■□□□ 1.87
SPCS2-205ENST00000527290 KIF21AQ7Z4S6 1674 aa26.71■■□□□ 1.87
SPCS2-205ENST00000527290 FANCD2Q9BXW9 1451 aa26.69■■□□□ 1.86
SPCS2-205ENST00000527290 MRC2Q9UBG0 1479 aa26.67■■□□□ 1.86
SPCS2-205ENST00000527290 CEP164Q9UPV0 1460 aa26.67■■□□□ 1.86
SPCS2-205ENST00000527290 WDR62O43379 1518 aa26.55■■□□□ 1.84
SPCS2-205ENST00000527290 SUPT5HO00267 1087 aaKnown RBP26.5■■□□□ 1.83
SPCS2-205ENST00000527290 DNAJC5Q9H3Z4 198 aa26.48■■□□□ 1.83
SPCS2-205ENST00000527290 URB2Q14146 1524 aaKnown RBP26.4■■□□□ 1.82
SPCS2-205ENST00000527290 PRDM2Q13029 1718 aa26.33■■□□□ 1.81
SPCS2-205ENST00000527290 ABCC8Q09428 1581 aa26.25■■□□□ 1.79
SPCS2-205ENST00000527290 TOPBP1Q92547 1522 aa26.21■■□□□ 1.79
SPCS2-205ENST00000527290 IFT140Q96RY7 1462 aa26.14■■□□□ 1.78
SPCS2-205ENST00000527290 DNMBPQ6XZF7 1577 aa26.13■■□□□ 1.77
SPCS2-205ENST00000527290 ZNF608Q9ULD9 1512 aaPredicted RBP26.01■■□□□ 1.75
SPCS2-205ENST00000527290 POLA1P09884 1462 aaPredicted RBP25.98■■□□□ 1.75
SPCS2-205ENST00000527290 SOGA1O94964 1423 aa25.94■■□□□ 1.74
SPCS2-205ENST00000527290 OSCARQ8IYS5 282 aa25.93■■□□□ 1.74
SPCS2-205ENST00000527290 CUX1P39880 1505 aa25.93■■□□□ 1.74
SPCS2-205ENST00000527290 TARBP1Q13395 1621 aaKnown RBP25.88■■□□□ 1.73
SPCS2-205ENST00000527290 FGD5Q6ZNL6 1462 aa25.88■■□□□ 1.73
SPCS2-205ENST00000527290 RAD54L2Q9Y4B4 1467 aa25.88■■□□□ 1.73
SPCS2-205ENST00000527290 AQRO60306 1485 aaKnown RBP eCLIP25.87■■□□□ 1.73
SPCS2-205ENST00000527290 TDRD9Q8NDG6 1382 aaKnown RBP25.82■■□□□ 1.72
SPCS2-205ENST00000527290 EIF4G3O43432 1585 aaKnown RBP25.81■■□□□ 1.72
SPCS2-205ENST00000527290 WRNQ14191 1432 aaPredicted RBP eCLIP25.74■■□□□ 1.71
SPCS2-205ENST00000527290 WDR97A6NE52 1622 aa25.7■■□□□ 1.7
SPCS2-205ENST00000527290 FBLN2P98095 1184 aa25.67■■□□□ 1.7
SPCS2-205ENST00000527290 ABCA10Q8WWZ4 1543 aa25.64■■□□□ 1.7
SPCS2-205ENST00000527290 GRIN2BQ13224 1484 aa25.64■■□□□ 1.69
SPCS2-205ENST00000527290 TOP2BQ02880 1626 aa25.63■■□□□ 1.69
SPCS2-205ENST00000527290 GAPVD1Q14C86 1478 aa25.6■■□□□ 1.69
SPCS2-205ENST00000527290 SNAPC4Q5SXM2 1469 aa25.6■■□□□ 1.69
SPCS2-205ENST00000527290 SYNJ1O43426 1573 aa25.59■■□□□ 1.69
SPCS2-205ENST00000527290 CHMP7Q8WUX9 453 aaPredicted RBP25.58■■□□□ 1.69
SPCS2-205ENST00000527290 MAGI1Q96QZ7 1491 aaPredicted RBP25.57■■□□□ 1.68
SPCS2-205ENST00000527290 BIVM-ERCC5R4GMW8 1640 aa25.56■■□□□ 1.68
SPCS2-205ENST00000527290 TRIM41Q8WV44 630 aa25.5■■□□□ 1.67
SPCS2-205ENST00000527290 SYNJ2O15056 1496 aa25.48■■□□□ 1.67
SPCS2-205ENST00000527290 ABCA5Q8WWZ7 1642 aa25.47■■□□□ 1.67
SPCS2-205ENST00000527290 CHD1O14646 1710 aa25.45■■□□□ 1.66
SPCS2-205ENST00000527290 ARHGEF11O15085 1522 aa25.37■■□□□ 1.65
SPCS2-205ENST00000527290 PBRM1Q86U86 1689 aa25.37■■□□□ 1.65
SPCS2-205ENST00000527290 RIMBP3CA6NJZ7 1639 aa25.34■■□□□ 1.65
SPCS2-205ENST00000527290 RIMBP3BA6NNM3 1639 aa25.34■■□□□ 1.65
SPCS2-205ENST00000527290 RIMBP3Q9UFD9 1639 aa25.34■■□□□ 1.65
SPCS2-205ENST00000527290 FHAD1B1AJZ9 1412 aa25.32■■□□□ 1.64
SPCS2-205ENST00000527290 ERICH3Q5RHP9 1530 aa25.32■■□□□ 1.64
SPCS2-205ENST00000527290 CLASP1Q7Z460 1538 aa25.28■■□□□ 1.64
SPCS2-205ENST00000527290 CYB5RLQ6IPT4 315 aa25.27■■□□□ 1.64
SPCS2-205ENST00000527290 GRIN2AQ12879 1464 aa25.27■■□□□ 1.64
SPCS2-205ENST00000527290 ADAMTS12P58397 1594 aa25.26■■□□□ 1.63
SPCS2-205ENST00000527290 KIF27Q86VH2 1401 aa25.25■■□□□ 1.63
SPCS2-205ENST00000527290 IGF1RP08069 1367 aa25.19■■□□□ 1.62
SPCS2-205ENST00000527290 NUP160Q12769 1436 aa25.19■■□□□ 1.62
SPCS2-205ENST00000527290 ARAP1Q96P48 1450 aa25.15■■□□□ 1.62
SPCS2-205ENST00000527290 CEP170Q5SW79 1584 aa25.1■■□□□ 1.61
SPCS2-205ENST00000527290 CARMIL1Q5VZK9 1371 aa25.03■■□□□ 1.6
SPCS2-205ENST00000527290 JPH4Q96JJ6 628 aa25.02■■□□□ 1.6
SPCS2-205ENST00000527290 CUL7Q14999 1698 aa24.98■■□□□ 1.59
SPCS2-205ENST00000527290 PRG4Q92954 1404 aaPredicted RBP24.93■■□□□ 1.58
SPCS2-205ENST00000527290 SHROOM2Q13796 1616 aa24.92■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms