RNA–Protein interactions for RNA: ENST00000527194.5

GRINA-204, Transcript of glutamate ionotropic receptor NMDA type subunit associated protein 1, humanhuman

TSL 2

Gene GRINA, Length 806 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRINA-204ENST00000527194 NISCHQ9Y2I1 1504 aa36.25■■■■□ 3.39
GRINA-204ENST00000527194 CCDC180Q9P1Z9 1646 aa32.44■■■□□ 2.78
GRINA-204ENST00000527194 ABCC9O60706 1549 aa31.56■■■□□ 2.64
GRINA-204ENST00000527194 RB1CC1Q8TDY2 1594 aa30.46■■■□□ 2.47
GRINA-204ENST00000527194 NACADO15069 1562 aa30.4■■■□□ 2.46
GRINA-204ENST00000527194 ZCCHC6Q5VYS8 1495 aaKnown RBP30.23■■■□□ 2.43
GRINA-204ENST00000527194 MYO15BQ96JP2 1530 aa30.2■■■□□ 2.42
GRINA-204ENST00000527194 DCAF8L2P0C7V8 631 aa30.07■■■□□ 2.4
GRINA-204ENST00000527194 DCAF1Q9Y4B6 1507 aa30.05■■■□□ 2.4
GRINA-204ENST00000527194 UNC13AQ9UPW8 1703 aa29.92■■■□□ 2.38
GRINA-204ENST00000527194 BICRAQ9NZM4 1560 aa29.52■■■□□ 2.32
GRINA-204ENST00000527194 SCRIBQ14160 1630 aa29.49■■■□□ 2.31
GRINA-204ENST00000527194 PABPN1Q86U42 306 aaKnown RBP eCLIP29.35■■■□□ 2.29
GRINA-204ENST00000527194 SHROOM4Q9ULL8 1493 aa29.26■■■□□ 2.27
GRINA-204ENST00000527194 DNAJC5BQ9UF47 199 aa28.85■■■□□ 2.21
GRINA-204ENST00000527194 EIF4G1Q04637 1599 aaKnown RBP28.75■■■□□ 2.19
GRINA-204ENST00000527194 CC2D2AQ9P2K1 1620 aa28.64■■■□□ 2.18
GRINA-204ENST00000527194 CECR2Q9BXF3 1484 aa28.38■■■□□ 2.13
GRINA-204ENST00000527194 SMARCA4P51532 1647 aa28.22■■■□□ 2.11
GRINA-204ENST00000527194 BAZ1AQ9NRL2 1556 aaPredicted RBP28.16■■■□□ 2.1
GRINA-204ENST00000527194 SMARCA2P51531 1590 aa28.03■■■□□ 2.08
GRINA-204ENST00000527194 ATAD2BQ9ULI0 1458 aa27.96■■■□□ 2.07
GRINA-204ENST00000527194 NCAPD3P42695 1498 aa27.95■■■□□ 2.06
GRINA-204ENST00000527194 PEG3Q9GZU2 1588 aa27.94■■■□□ 2.06
GRINA-204ENST00000527194 HMGXB3Q12766 1538 aa27.93■■■□□ 2.06
GRINA-204ENST00000527194 MROH2BQ7Z745 1585 aa27.92■■■□□ 2.06
GRINA-204ENST00000527194 BAZ1BQ9UIG0 1483 aaKnown RBP27.78■■■□□ 2.04
GRINA-204ENST00000527194 WIZO95785 1651 aa27.69■■■□□ 2.02
GRINA-204ENST00000527194 RSF1Q96T23 1441 aaPredicted RBP27.53■■■□□ 2
GRINA-204ENST00000527194 TOP2AP11388 1531 aaKnown RBP27.4■■□□□ 1.98
GRINA-204ENST00000527194 LAMC3Q9Y6N6 1575 aa27.34■■□□□ 1.97
GRINA-204ENST00000527194 NESP48681 1621 aa27.3■■□□□ 1.96
GRINA-204ENST00000527194 ERCC6Q03468 1493 aa27.25■■□□□ 1.95
GRINA-204ENST00000527194 KIF21AQ7Z4S6 1674 aa27.16■■□□□ 1.94
GRINA-204ENST00000527194 CADPSQ9ULU8 1353 aa27.1■■□□□ 1.93
GRINA-204ENST00000527194 PRDM2Q13029 1718 aa27.08■■□□□ 1.93
GRINA-204ENST00000527194 THOC2Q8NI27 1593 aaKnown RBP27.05■■□□□ 1.92
GRINA-204ENST00000527194 PDS5BQ9NTI5 1447 aa27.05■■□□□ 1.92
GRINA-204ENST00000527194 CUX2O14529 1486 aa27.02■■□□□ 1.92
GRINA-204ENST00000527194 CFTRP13569 1480 aa26.98■■□□□ 1.91
GRINA-204ENST00000527194 CCDC88BA6NC98 1476 aa26.96■■□□□ 1.91
GRINA-204ENST00000527194 CEP164Q9UPV0 1460 aa26.87■■□□□ 1.89
GRINA-204ENST00000527194 FANCD2Q9BXW9 1451 aa26.85■■□□□ 1.89
GRINA-204ENST00000527194 MRC2Q9UBG0 1479 aa26.83■■□□□ 1.89
GRINA-204ENST00000527194 WDR62O43379 1518 aa26.79■■□□□ 1.88
GRINA-204ENST00000527194 SUPT5HO00267 1087 aaKnown RBP26.67■■□□□ 1.86
GRINA-204ENST00000527194 URB2Q14146 1524 aaKnown RBP26.6■■□□□ 1.85
GRINA-204ENST00000527194 DNMBPQ6XZF7 1577 aa26.46■■□□□ 1.83
GRINA-204ENST00000527194 ABCC8Q09428 1581 aa26.44■■□□□ 1.82
GRINA-204ENST00000527194 TOPBP1Q92547 1522 aa26.44■■□□□ 1.82
GRINA-204ENST00000527194 IFT140Q96RY7 1462 aa26.28■■□□□ 1.8
GRINA-204ENST00000527194 CUX1P39880 1505 aa26.22■■□□□ 1.79
GRINA-204ENST00000527194 TARBP1Q13395 1621 aaKnown RBP26.21■■□□□ 1.79
GRINA-204ENST00000527194 POLA1P09884 1462 aaPredicted RBP26.2■■□□□ 1.78
GRINA-204ENST00000527194 EIF4G3O43432 1585 aaKnown RBP26.16■■□□□ 1.78
GRINA-204ENST00000527194 FGD5Q6ZNL6 1462 aa26.14■■□□□ 1.78
GRINA-204ENST00000527194 ZNF608Q9ULD9 1512 aaPredicted RBP26.13■■□□□ 1.77
GRINA-204ENST00000527194 WDR97A6NE52 1622 aa26.1■■□□□ 1.77
GRINA-204ENST00000527194 BIVM-ERCC5R4GMW8 1640 aa26.09■■□□□ 1.77
GRINA-204ENST00000527194 DNAJC5Q9H3Z4 198 aa26.06■■□□□ 1.76
GRINA-204ENST00000527194 TOP2BQ02880 1626 aa26.04■■□□□ 1.76
GRINA-204ENST00000527194 RAD54L2Q9Y4B4 1467 aa26.03■■□□□ 1.76
GRINA-204ENST00000527194 SYNJ1O43426 1573 aa26.01■■□□□ 1.75
GRINA-204ENST00000527194 SOGA1O94964 1423 aa26.01■■□□□ 1.75
GRINA-204ENST00000527194 WRNQ14191 1432 aaPredicted RBP eCLIP25.99■■□□□ 1.75
GRINA-204ENST00000527194 AQRO60306 1485 aaKnown RBP eCLIP25.92■■□□□ 1.74
GRINA-204ENST00000527194 PBRM1Q86U86 1689 aa25.92■■□□□ 1.74
GRINA-204ENST00000527194 CHD1O14646 1710 aa25.9■■□□□ 1.74
GRINA-204ENST00000527194 ABCA10Q8WWZ4 1543 aa25.88■■□□□ 1.73
GRINA-204ENST00000527194 ABCA5Q8WWZ7 1642 aa25.88■■□□□ 1.73
GRINA-204ENST00000527194 TDRD9Q8NDG6 1382 aaKnown RBP25.84■■□□□ 1.73
GRINA-204ENST00000527194 GRIN2BQ13224 1484 aa25.79■■□□□ 1.72
GRINA-204ENST00000527194 SNAPC4Q5SXM2 1469 aa25.78■■□□□ 1.72
GRINA-204ENST00000527194 GAPVD1Q14C86 1478 aa25.77■■□□□ 1.72
GRINA-204ENST00000527194 MAGI1Q96QZ7 1491 aaPredicted RBP25.77■■□□□ 1.72
GRINA-204ENST00000527194 OSCARQ8IYS5 282 aa25.71■■□□□ 1.71
GRINA-204ENST00000527194 SYNJ2O15056 1496 aa25.64■■□□□ 1.69
GRINA-204ENST00000527194 ADAMTS12P58397 1594 aa25.64■■□□□ 1.69
GRINA-204ENST00000527194 ERICH3Q5RHP9 1530 aa25.61■■□□□ 1.69
GRINA-204ENST00000527194 FBLN2P98095 1184 aa25.55■■□□□ 1.68
GRINA-204ENST00000527194 CLASP1Q7Z460 1538 aa25.53■■□□□ 1.68
GRINA-204ENST00000527194 RIMBP3CA6NJZ7 1639 aa25.52■■□□□ 1.68
GRINA-204ENST00000527194 RIMBP3BA6NNM3 1639 aa25.52■■□□□ 1.68
GRINA-204ENST00000527194 RIMBP3Q9UFD9 1639 aa25.52■■□□□ 1.68
GRINA-204ENST00000527194 CHMP7Q8WUX9 453 aaPredicted RBP25.5■■□□□ 1.67
GRINA-204ENST00000527194 GRIN2AQ12879 1464 aa25.47■■□□□ 1.67
GRINA-204ENST00000527194 FHAD1B1AJZ9 1412 aa25.46■■□□□ 1.67
GRINA-204ENST00000527194 ARHGEF11O15085 1522 aa25.46■■□□□ 1.67
GRINA-204ENST00000527194 CUL7Q14999 1698 aa25.45■■□□□ 1.67
GRINA-204ENST00000527194 KIF27Q86VH2 1401 aa25.45■■□□□ 1.66
GRINA-204ENST00000527194 CEP170Q5SW79 1584 aa25.39■■□□□ 1.65
GRINA-204ENST00000527194 NUP160Q12769 1436 aa25.35■■□□□ 1.65
GRINA-204ENST00000527194 SHROOM2Q13796 1616 aa25.27■■□□□ 1.64
GRINA-204ENST00000527194 RUSC2Q8N2Y8 1516 aa25.27■■□□□ 1.64
GRINA-204ENST00000527194 IGF1RP08069 1367 aa25.26■■□□□ 1.63
GRINA-204ENST00000527194 ARAP1Q96P48 1450 aa25.23■■□□□ 1.63
GRINA-204ENST00000527194 TRIM41Q8WV44 630 aa25.21■■□□□ 1.63
GRINA-204ENST00000527194 CARMIL1Q5VZK9 1371 aa25.15■■□□□ 1.62
GRINA-204ENST00000527194 ERCC6L2Q5T890 1561 aa25.11■■□□□ 1.61
GRINA-204ENST00000527194 KIAA0586Q9BVV6 1533 aa25.07■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms