RNA–Protein interactions for RNA: ENST00000527153.5

FNTA-206, Transcript of farnesyltransferase, CAAX box, alpha, humanhuman

TSL 3

Gene FNTA, Length 582 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNTA-206ENST00000527153 NISCHQ9Y2I1 1504 aa50.97■■■■■ 5.75
FNTA-206ENST00000527153 CCDC180Q9P1Z9 1646 aa45.7■■■■■ 4.91
FNTA-206ENST00000527153 ABCC9O60706 1549 aa45.69■■■■■ 4.9
FNTA-206ENST00000527153 RB1CC1Q8TDY2 1594 aa43.51■■■■■ 4.56
FNTA-206ENST00000527153 NACADO15069 1562 aa43.23■■■■■ 4.51
FNTA-206ENST00000527153 DCAF8L2P0C7V8 631 aa42.99■■■■■ 4.47
FNTA-206ENST00000527153 DNAJC5BQ9UF47 199 aa42.87■■■■■ 4.45
FNTA-206ENST00000527153 MYO15BQ96JP2 1530 aa42.68■■■■■ 4.42
FNTA-206ENST00000527153 PABPN1Q86U42 306 aaKnown RBP eCLIP42.56■■■■■ 4.4
FNTA-206ENST00000527153 UNC13AQ9UPW8 1703 aa42.42■■■■■ 4.38
FNTA-206ENST00000527153 ZCCHC6Q5VYS8 1495 aaKnown RBP42.25■■■■■ 4.35
FNTA-206ENST00000527153 BICRAQ9NZM4 1560 aa42.23■■■■■ 4.35
FNTA-206ENST00000527153 DCAF1Q9Y4B6 1507 aa42.14■■■■■ 4.34
FNTA-206ENST00000527153 SHROOM4Q9ULL8 1493 aa41.73■■■■■ 4.27
FNTA-206ENST00000527153 SCRIBQ14160 1630 aa41.63■■■■■ 4.26
FNTA-206ENST00000527153 CC2D2AQ9P2K1 1620 aa41.26■■■■■ 4.19
FNTA-206ENST00000527153 EIF4G1Q04637 1599 aaKnown RBP41.2■■■■■ 4.19
FNTA-206ENST00000527153 CECR2Q9BXF3 1484 aa41.18■■■■■ 4.18
FNTA-206ENST00000527153 NCAPD3P42695 1498 aa39.94■■■■□ 3.98
FNTA-206ENST00000527153 ATAD2BQ9ULI0 1458 aa39.81■■■■□ 3.96
FNTA-206ENST00000527153 SMARCA4P51532 1647 aa39.73■■■■□ 3.95
FNTA-206ENST00000527153 SMARCA2P51531 1590 aa39.68■■■■□ 3.94
FNTA-206ENST00000527153 HMGXB3Q12766 1538 aa39.62■■■■□ 3.93
FNTA-206ENST00000527153 BAZ1AQ9NRL2 1556 aaPredicted RBP39.56■■■■□ 3.92
FNTA-206ENST00000527153 ERCC6Q03468 1493 aa39.46■■■■□ 3.91
FNTA-206ENST00000527153 BAZ1BQ9UIG0 1483 aaKnown RBP39.41■■■■□ 3.9
FNTA-206ENST00000527153 CUX2O14529 1486 aa39.4■■■■□ 3.9
FNTA-206ENST00000527153 PEG3Q9GZU2 1588 aa39.38■■■■□ 3.89
FNTA-206ENST00000527153 DNAJC5Q9H3Z4 198 aa39.37■■■■□ 3.89
FNTA-206ENST00000527153 MROH2BQ7Z745 1585 aa39.27■■■■□ 3.88
FNTA-206ENST00000527153 NESP48681 1621 aa39.25■■■■□ 3.87
FNTA-206ENST00000527153 LAMC3Q9Y6N6 1575 aa38.99■■■■□ 3.83
FNTA-206ENST00000527153 THOC2Q8NI27 1593 aaKnown RBP38.84■■■■□ 3.81
FNTA-206ENST00000527153 PDS5BQ9NTI5 1447 aa38.8■■■■□ 3.8
FNTA-206ENST00000527153 WIZO95785 1651 aa38.74■■■■□ 3.79
FNTA-206ENST00000527153 CADPSQ9ULU8 1353 aa38.72■■■■□ 3.79
FNTA-206ENST00000527153 KIF21AQ7Z4S6 1674 aa38.69■■■■□ 3.78
FNTA-206ENST00000527153 RSF1Q96T23 1441 aaPredicted RBP38.49■■■■□ 3.75
FNTA-206ENST00000527153 MRC2Q9UBG0 1479 aa38.45■■■■□ 3.75
FNTA-206ENST00000527153 WDR62O43379 1518 aa38.34■■■■□ 3.73
FNTA-206ENST00000527153 TOP2AP11388 1531 aaKnown RBP38.32■■■■□ 3.72
FNTA-206ENST00000527153 CEP164Q9UPV0 1460 aa38.29■■■■□ 3.72
FNTA-206ENST00000527153 CFTRP13569 1480 aa38.28■■■■□ 3.72
FNTA-206ENST00000527153 FANCD2Q9BXW9 1451 aa38.27■■■■□ 3.72
FNTA-206ENST00000527153 URB2Q14146 1524 aaKnown RBP37.95■■■■□ 3.67
FNTA-206ENST00000527153 CCDC88BA6NC98 1476 aa37.89■■■■□ 3.66
FNTA-206ENST00000527153 PRDM2Q13029 1718 aa37.78■■■■□ 3.64
FNTA-206ENST00000527153 OSCARQ8IYS5 282 aa37.62■■■■□ 3.61
FNTA-206ENST00000527153 TRIM41Q8WV44 630 aa37.61■■■■□ 3.61
FNTA-206ENST00000527153 IFT140Q96RY7 1462 aa37.56■■■■□ 3.6
FNTA-206ENST00000527153 TOPBP1Q92547 1522 aa37.54■■■■□ 3.6
FNTA-206ENST00000527153 ABCC8Q09428 1581 aa37.48■■■■□ 3.59
FNTA-206ENST00000527153 ZNF608Q9ULD9 1512 aaPredicted RBP37.46■■■■□ 3.59
FNTA-206ENST00000527153 DNMBPQ6XZF7 1577 aa37.39■■■■□ 3.58
FNTA-206ENST00000527153 EIF4G3O43432 1585 aaKnown RBP37.23■■■■□ 3.55
FNTA-206ENST00000527153 TARBP1Q13395 1621 aaKnown RBP37.18■■■■□ 3.54
FNTA-206ENST00000527153 POLA1P09884 1462 aaPredicted RBP37.16■■■■□ 3.54
FNTA-206ENST00000527153 AQRO60306 1485 aaKnown RBP eCLIP37.13■■■■□ 3.549e-7■■■□□ 18.2
FNTA-206ENST00000527153 RIMBP3CA6NJZ7 1639 aa37.07■■■■□ 3.52
FNTA-206ENST00000527153 RIMBP3BA6NNM3 1639 aa37.07■■■■□ 3.52
FNTA-206ENST00000527153 RIMBP3Q9UFD9 1639 aa37.07■■■■□ 3.52
FNTA-206ENST00000527153 RAD54L2Q9Y4B4 1467 aa37.01■■■■□ 3.52
FNTA-206ENST00000527153 SOGA1O94964 1423 aa37■■■■□ 3.51
FNTA-206ENST00000527153 ARHGEF11O15085 1522 aa36.98■■■■□ 3.51
FNTA-206ENST00000527153 TDRD9Q8NDG6 1382 aaKnown RBP36.92■■■■□ 3.5
FNTA-206ENST00000527153 FGD5Q6ZNL6 1462 aa36.92■■■■□ 3.5
FNTA-206ENST00000527153 CHD1O14646 1710 aa36.9■■■■□ 3.5
FNTA-206ENST00000527153 CUX1P39880 1505 aa36.9■■■■□ 3.5
FNTA-206ENST00000527153 FBLN2P98095 1184 aa36.88■■■■□ 3.49
FNTA-206ENST00000527153 WDR97A6NE52 1622 aa36.83■■■■□ 3.49
FNTA-206ENST00000527153 SUPT5HO00267 1087 aaKnown RBP36.78■■■■□ 3.48
FNTA-206ENST00000527153 SNAPC4Q5SXM2 1469 aa36.75■■■■□ 3.47
FNTA-206ENST00000527153 CYB5RLQ6IPT4 315 aa36.71■■■■□ 3.47
FNTA-206ENST00000527153 GRIN2BQ13224 1484 aa36.69■■■■□ 3.46
FNTA-206ENST00000527153 MAGI1Q96QZ7 1491 aaPredicted RBP36.68■■■■□ 3.46
FNTA-206ENST00000527153 CHMP7Q8WUX9 453 aaPredicted RBP36.64■■■■□ 3.46
FNTA-206ENST00000527153 ARAP1Q96P48 1450 aa36.62■■■■□ 3.45
FNTA-206ENST00000527153 CLASP1Q7Z460 1538 aa36.56■■■■□ 3.44
FNTA-206ENST00000527153 SYNJ2O15056 1496 aa36.55■■■■□ 3.44
FNTA-206ENST00000527153 GAPVD1Q14C86 1478 aa36.54■■■■□ 3.44
FNTA-206ENST00000527153 SYNJ1O43426 1573 aa36.53■■■■□ 3.44
FNTA-206ENST00000527153 ABCA10Q8WWZ4 1543 aa36.53■■■■□ 3.44
FNTA-206ENST00000527153 PBRM1Q86U86 1689 aa36.44■■■■□ 3.42
FNTA-206ENST00000527153 ABCA5Q8WWZ7 1642 aa36.43■■■■□ 3.42
FNTA-206ENST00000527153 WRNQ14191 1432 aaPredicted RBP eCLIP36.39■■■■□ 3.42
FNTA-206ENST00000527153 TOP2BQ02880 1626 aa36.3■■■■□ 3.4
FNTA-206ENST00000527153 TRHP20396 242 aaPredicted RBP36.29■■■■□ 3.4
FNTA-206ENST00000527153 BIVM-ERCC5R4GMW8 1640 aa36.28■■■■□ 3.4
FNTA-206ENST00000527153 GRIN2AQ12879 1464 aa36.19■■■■□ 3.38
FNTA-206ENST00000527153 ADAMTS12P58397 1594 aa36.16■■■■□ 3.38
FNTA-206ENST00000527153 FHAD1B1AJZ9 1412 aa36.1■■■■□ 3.37
FNTA-206ENST00000527153 NUP160Q12769 1436 aa36.09■■■■□ 3.37
FNTA-206ENST00000527153 ERICH3Q5RHP9 1530 aa36.06■■■■□ 3.36
FNTA-206ENST00000527153 CEP170Q5SW79 1584 aa36.04■■■■□ 3.36
FNTA-206ENST00000527153 ERCC6L2Q5T890 1561 aa35.97■■■■□ 3.35
FNTA-206ENST00000527153 SHROOM2Q13796 1616 aa35.89■■■■□ 3.34
FNTA-206ENST00000527153 PRG4Q92954 1404 aaPredicted RBP35.74■■■■□ 3.31
FNTA-206ENST00000527153 JPH4Q96JJ6 628 aa35.72■■■■□ 3.31
FNTA-206ENST00000527153 RUSC2Q8N2Y8 1516 aa35.64■■■■□ 3.3
FNTA-206ENST00000527153 KIF27Q86VH2 1401 aa35.63■■■■□ 3.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms