RNA–Protein interactions for RNA: ENST00000526940.1

NFRKB-205, Transcript of nuclear factor related to kappaB binding protein, humanhuman

TSL 2 BASIC

Gene NFRKB, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFRKB-205ENST00000526940 AEBP2Q6ZN18 517 aaPredicted RBP30.61■■■□□ 2.49
NFRKB-205ENST00000526940 CHIC1Q5VXU3 224 aa29.95■■■□□ 2.39
NFRKB-205ENST00000526940 PHF23Q9BUL5 403 aaPredicted RBP26.37■■□□□ 1.81
NFRKB-205ENST00000526940 SENP3Q9H4L4 574 aaPredicted RBP25.92■■□□□ 1.74
NFRKB-205ENST00000526940 PLPPR3Q6T4P5 718 aa24.33■■□□□ 1.49
NFRKB-205ENST00000526940 FOXD1Q16676 465 aa24.08■■□□□ 1.45
NFRKB-205ENST00000526940 POTEDQ86YR6 584 aa23.8■■□□□ 1.4
NFRKB-205ENST00000526940 NISCHQ9Y2I1 1504 aa23.64■■□□□ 1.38
NFRKB-205ENST00000526940 PPP6R1Q9UPN7 881 aa23.24■■□□□ 1.31
NFRKB-205ENST00000526940 ADRA2BP18089 450 aa23.2■■□□□ 1.3
NFRKB-205ENST00000526940 MSH5O43196 834 aa22.69■■□□□ 1.22
NFRKB-205ENST00000526940 PIAS4Q8N2W9 510 aaPredicted RBP22.69■■□□□ 1.22
NFRKB-205ENST00000526940 PPP4R3CPQ6ZMV5 832 aa21.46■■□□□ 1.03
NFRKB-205ENST00000526940 SCAF1Q9H7N4 1312 aaKnown RBP21.19■□□□□ 0.98
NFRKB-205ENST00000526940 CCDC180Q9P1Z9 1646 aa21.11■□□□□ 0.97
NFRKB-205ENST00000526940 KCNA4P22459 653 aa21.04■□□□□ 0.96
NFRKB-205ENST00000526940 MAPK8IP2Q13387 824 aaPredicted RBP21.04■□□□□ 0.96
NFRKB-205ENST00000526940 NCBP3Q53F19 620 aaKnown RBP20.88■□□□□ 0.93
NFRKB-205ENST00000526940 CNKSR2Q8WXI2 1034 aa20.84■□□□□ 0.93
NFRKB-205ENST00000526940 DMRT2Q9Y5R5 561 aa20.72■□□□□ 0.91
NFRKB-205ENST00000526940 NPM3O75607 178 aaKnown RBP20.61■□□□□ 0.89
NFRKB-205ENST00000526940 ABCC9O60706 1549 aa20.59■□□□□ 0.89
NFRKB-205ENST00000526940 RNF216Q9NWF9 866 aaPredicted RBP20.42■□□□□ 0.86
NFRKB-205ENST00000526940 HOXD11P31277 338 aaPredicted RBP20.34■□□□□ 0.85
NFRKB-205ENST00000526940 DNAJC5BQ9UF47 199 aa20.04■□□□□ 0.8
NFRKB-205ENST00000526940 CACNB1Q02641 598 aaPredicted RBP20.03■□□□□ 0.8
NFRKB-205ENST00000526940 SLC4A1APQ9BWU0 796 aaKnown RBP20.03■□□□□ 0.8
NFRKB-205ENST00000526940 RB1CC1Q8TDY2 1594 aa19.8■□□□□ 0.76
NFRKB-205ENST00000526940 NACADO15069 1562 aa19.77■□□□□ 0.76
NFRKB-205ENST00000526940 DCAF8L1A6NGE4 600 aa19.76■□□□□ 0.75
NFRKB-205ENST00000526940 ZCCHC6Q5VYS8 1495 aaKnown RBP19.72■□□□□ 0.75
NFRKB-205ENST00000526940 MYO15BQ96JP2 1530 aa19.65■□□□□ 0.74
NFRKB-205ENST00000526940 UNC13AQ9UPW8 1703 aa19.56■□□□□ 0.72
NFRKB-205ENST00000526940 DCAF1Q9Y4B6 1507 aa19.56■□□□□ 0.72
NFRKB-205ENST00000526940 DCAF8L2P0C7V8 631 aa19.56■□□□□ 0.72
NFRKB-205ENST00000526940 EHMT2Q96KQ7 1210 aa19.52■□□□□ 0.72
NFRKB-205ENST00000526940 SLC4A2P04920 1241 aa19.47■□□□□ 0.71
NFRKB-205ENST00000526940 ZBTB22O15209 634 aa19.38■□□□□ 0.69
NFRKB-205ENST00000526940 RNF39Q9H2S5 420 aa19.38■□□□□ 0.69
NFRKB-205ENST00000526940 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.33■□□□□ 0.687e-8■□□□□ 10.9
NFRKB-205ENST00000526940 FOXD4L1Q9NU39 408 aa19.33■□□□□ 0.68
NFRKB-205ENST00000526940 CSRNP3Q8WYN3 585 aa19.32■□□□□ 0.68
NFRKB-205ENST00000526940 BICRAQ9NZM4 1560 aa19.32■□□□□ 0.68
NFRKB-205ENST00000526940 SCRIBQ14160 1630 aa19.22■□□□□ 0.67
NFRKB-205ENST00000526940 PABPN1Q86U42 306 aaKnown RBP eCLIP19.18■□□□□ 0.66
NFRKB-205ENST00000526940 U3KPZ7 1027 aaPredicted RBP19.07■□□□□ 0.64
NFRKB-205ENST00000526940 MYCNP04198 464 aaPredicted RBP19.03■□□□□ 0.64
NFRKB-205ENST00000526940 SHROOM4Q9ULL8 1493 aa18.98■□□□□ 0.63
NFRKB-205ENST00000526940 C1QBPQ07021 282 aaKnown RBP18.94■□□□□ 0.62
NFRKB-205ENST00000526940 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.81■□□□□ 0.6
NFRKB-205ENST00000526940 HNRNPUL2Q1KMD3 747 aaKnown RBP18.81■□□□□ 0.6
NFRKB-205ENST00000526940 SAMD1Q6SPF0 538 aaPredicted RBP18.75■□□□□ 0.59
NFRKB-205ENST00000526940 EIF4G1Q04637 1599 aaKnown RBP18.75■□□□□ 0.59
NFRKB-205ENST00000526940 CC2D2AQ9P2K1 1620 aa18.69■□□□□ 0.58
NFRKB-205ENST00000526940 ATXN8OSP0DMR3 200 aa18.66■□□□□ 0.58
NFRKB-205ENST00000526940 APLP2Q06481 763 aa18.58■□□□□ 0.56
NFRKB-205ENST00000526940 ATF5Q9Y2D1 282 aaPredicted RBP18.55■□□□□ 0.56
NFRKB-205ENST00000526940 SPINK5Q9NQ38 1064 aaPredicted RBP18.51■□□□□ 0.55
NFRKB-205ENST00000526940 CECR2Q9BXF3 1484 aa18.49■□□□□ 0.55
NFRKB-205ENST00000526940 POTEHQ6S545 545 aa18.43■□□□□ 0.54
NFRKB-205ENST00000526940 SMARCA4P51532 1647 aa18.4■□□□□ 0.54
NFRKB-205ENST00000526940 CAPN15O75808 1086 aa18.39■□□□□ 0.53
NFRKB-205ENST00000526940 ZNF219Q9P2Y4 722 aaPredicted RBP18.34■□□□□ 0.53
NFRKB-205ENST00000526940 TRHP20396 242 aaPredicted RBP18.33■□□□□ 0.52
NFRKB-205ENST00000526940 BAZ1AQ9NRL2 1556 aaPredicted RBP18.31■□□□□ 0.52
NFRKB-205ENST00000526940 MROH2BQ7Z745 1585 aa18.25■□□□□ 0.51
NFRKB-205ENST00000526940 ATAD2BQ9ULI0 1458 aa18.25■□□□□ 0.51
NFRKB-205ENST00000526940 PEG3Q9GZU2 1588 aa18.22■□□□□ 0.51
NFRKB-205ENST00000526940 NCAPD3P42695 1498 aa18.22■□□□□ 0.51
NFRKB-205ENST00000526940 SMARCA2P51531 1590 aa18.2■□□□□ 0.5
NFRKB-205ENST00000526940 HMGXB3Q12766 1538 aa18.18■□□□□ 0.5
NFRKB-205ENST00000526940 DSG3P32926 999 aa18.11■□□□□ 0.49
NFRKB-205ENST00000526940 WIZO95785 1651 aa18.1■□□□□ 0.49
NFRKB-205ENST00000526940 POLA2Q14181 598 aa18.07■□□□□ 0.48
NFRKB-205ENST00000526940 BAZ1BQ9UIG0 1483 aaKnown RBP18.07■□□□□ 0.48
NFRKB-205ENST00000526940 ABCB7O75027 752 aa18.06■□□□□ 0.48
NFRKB-205ENST00000526940 RSF1Q96T23 1441 aaPredicted RBP17.98■□□□□ 0.47
NFRKB-205ENST00000526940 NESP48681 1621 aa17.86■□□□□ 0.45
NFRKB-205ENST00000526940 TOP2AP11388 1531 aaKnown RBP17.85■□□□□ 0.45
NFRKB-205ENST00000526940 LAMC3Q9Y6N6 1575 aa17.79■□□□□ 0.44
NFRKB-205ENST00000526940 MKRN4PQ13434 485 aaPredicted RBP17.75■□□□□ 0.43
NFRKB-205ENST00000526940 ZBTB12Q9Y330 459 aaPredicted RBP17.75■□□□□ 0.43
NFRKB-205ENST00000526940 KIF21AQ7Z4S6 1674 aa17.73■□□□□ 0.43
NFRKB-205ENST00000526940 FBLN2P98095 1184 aa17.71■□□□□ 0.43
NFRKB-205ENST00000526940 ERCC6Q03468 1493 aa17.68■□□□□ 0.42
NFRKB-205ENST00000526940 THOC2Q8NI27 1593 aaKnown RBP17.66■□□□□ 0.42
NFRKB-205ENST00000526940 CADPSQ9ULU8 1353 aa17.66■□□□□ 0.42
NFRKB-205ENST00000526940 PRDM2Q13029 1718 aa17.62■□□□□ 0.41
NFRKB-205ENST00000526940 CCDC88BA6NC98 1476 aa17.61■□□□□ 0.41
NFRKB-205ENST00000526940 CFTRP13569 1480 aa17.59■□□□□ 0.41
NFRKB-205ENST00000526940 PDS5BQ9NTI5 1447 aa17.56■□□□□ 0.4
NFRKB-205ENST00000526940 CUX2O14529 1486 aa17.56■□□□□ 0.4
NFRKB-205ENST00000526940 FANCD2Q9BXW9 1451 aa17.49■□□□□ 0.39
NFRKB-205ENST00000526940 CEP164Q9UPV0 1460 aa17.46■□□□□ 0.39
NFRKB-205ENST00000526940 WDR62O43379 1518 aa17.46■□□□□ 0.39
NFRKB-205ENST00000526940 MRC2Q9UBG0 1479 aa17.45■□□□□ 0.38
NFRKB-205ENST00000526940 OSCARQ8IYS5 282 aa17.44■□□□□ 0.38
NFRKB-205ENST00000526940 FKBP8Q14318 412 aa17.43■□□□□ 0.38
NFRKB-205ENST00000526940 URB2Q14146 1524 aaKnown RBP17.37■□□□□ 0.37
NFRKB-205ENST00000526940 SUPT5HO00267 1087 aaKnown RBP17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms