RNA–Protein interactions for RNA: ENST00000526846.1

CHD7-204, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-204ENST00000526846 NISCHQ9Y2I1 1504 aa39.5■■■■□ 3.91
CHD7-204ENST00000526846 CCDC180Q9P1Z9 1646 aa35.23■■■■□ 3.23
CHD7-204ENST00000526846 ABCC9O60706 1549 aa34.35■■■■□ 3.09
CHD7-204ENST00000526846 RB1CC1Q8TDY2 1594 aa33.08■■■□□ 2.89
CHD7-204ENST00000526846 NACADO15069 1562 aa33.04■■■□□ 2.88
CHD7-204ENST00000526846 ZCCHC6Q5VYS8 1495 aaKnown RBP32.92■■■□□ 2.86
CHD7-204ENST00000526846 MYO15BQ96JP2 1530 aa32.87■■■□□ 2.85
CHD7-204ENST00000526846 DCAF8L2P0C7V8 631 aa32.74■■■□□ 2.83
CHD7-204ENST00000526846 DCAF1Q9Y4B6 1507 aa32.72■■■□□ 2.83
CHD7-204ENST00000526846 UNC13AQ9UPW8 1703 aa32.52■■■□□ 2.8
CHD7-204ENST00000526846 BICRAQ9NZM4 1560 aa32.18■■■□□ 2.74
CHD7-204ENST00000526846 SCRIBQ14160 1630 aa32.05■■■□□ 2.72
CHD7-204ENST00000526846 PABPN1Q86U42 306 aaKnown RBP eCLIP32.01■■■□□ 2.71
CHD7-204ENST00000526846 SHROOM4Q9ULL8 1493 aa31.78■■■□□ 2.68
CHD7-204ENST00000526846 DNAJC5BQ9UF47 199 aa31.59■■■□□ 2.65
CHD7-204ENST00000526846 EIF4G1Q04637 1599 aaKnown RBP31.27■■■□□ 2.6
CHD7-204ENST00000526846 CC2D2AQ9P2K1 1620 aa31.15■■■□□ 2.58
CHD7-204ENST00000526846 CECR2Q9BXF3 1484 aa30.88■■■□□ 2.53
CHD7-204ENST00000526846 SMARCA4P51532 1647 aa30.69■■■□□ 2.5
CHD7-204ENST00000526846 BAZ1AQ9NRL2 1556 aaPredicted RBP30.59■■■□□ 2.49
CHD7-204ENST00000526846 ATAD2BQ9ULI0 1458 aa30.48■■■□□ 2.47
CHD7-204ENST00000526846 NCAPD3P42695 1498 aa30.47■■■□□ 2.47
CHD7-204ENST00000526846 SMARCA2P51531 1590 aa30.45■■■□□ 2.46
CHD7-204ENST00000526846 MROH2BQ7Z745 1585 aa30.45■■■□□ 2.46
CHD7-204ENST00000526846 PEG3Q9GZU2 1588 aa30.42■■■□□ 2.46
CHD7-204ENST00000526846 HMGXB3Q12766 1538 aa30.37■■■□□ 2.45
CHD7-204ENST00000526846 BAZ1BQ9UIG0 1483 aaKnown RBP30.19■■■□□ 2.42
CHD7-204ENST00000526846 WIZO95785 1651 aa30.14■■■□□ 2.42
CHD7-204ENST00000526846 RSF1Q96T23 1441 aaPredicted RBP30.04■■■□□ 2.4
CHD7-204ENST00000526846 TOP2AP11388 1531 aaKnown RBP29.8■■■□□ 2.36
CHD7-204ENST00000526846 NESP48681 1621 aa29.77■■■□□ 2.36
CHD7-204ENST00000526846 LAMC3Q9Y6N6 1575 aa29.7■■■□□ 2.35
CHD7-204ENST00000526846 ERCC6Q03468 1493 aa29.56■■■□□ 2.32
CHD7-204ENST00000526846 CADPSQ9ULU8 1353 aa29.52■■■□□ 2.32
CHD7-204ENST00000526846 KIF21AQ7Z4S6 1674 aa29.51■■■□□ 2.31
CHD7-204ENST00000526846 THOC2Q8NI27 1593 aaKnown RBP29.42■■■□□ 2.3
CHD7-204ENST00000526846 PDS5BQ9NTI5 1447 aa29.4■■■□□ 2.3
CHD7-204ENST00000526846 CCDC88BA6NC98 1476 aa29.4■■■□□ 2.3
CHD7-204ENST00000526846 CFTRP13569 1480 aa29.4■■■□□ 2.3
CHD7-204ENST00000526846 CUX2O14529 1486 aa29.35■■■□□ 2.29
CHD7-204ENST00000526846 PRDM2Q13029 1718 aa29.34■■■□□ 2.29
CHD7-204ENST00000526846 FANCD2Q9BXW9 1451 aa29.21■■■□□ 2.27
CHD7-204ENST00000526846 CEP164Q9UPV0 1460 aa29.18■■■□□ 2.26
CHD7-204ENST00000526846 MRC2Q9UBG0 1479 aa29.17■■■□□ 2.26
CHD7-204ENST00000526846 WDR62O43379 1518 aa29.13■■■□□ 2.25
CHD7-204ENST00000526846 SUPT5HO00267 1087 aaKnown RBP29.06■■■□□ 2.24
CHD7-204ENST00000526846 URB2Q14146 1524 aaKnown RBP28.98■■■□□ 2.23
CHD7-204ENST00000526846 TOPBP1Q92547 1522 aa28.78■■■□□ 2.2
CHD7-204ENST00000526846 DNMBPQ6XZF7 1577 aa28.76■■■□□ 2.19
CHD7-204ENST00000526846 ABCC8Q09428 1581 aa28.72■■■□□ 2.19
CHD7-204ENST00000526846 IFT140Q96RY7 1462 aa28.57■■■□□ 2.16
CHD7-204ENST00000526846 CUX1P39880 1505 aa28.57■■■□□ 2.16
CHD7-204ENST00000526846 TARBP1Q13395 1621 aaKnown RBP28.54■■■□□ 2.16
CHD7-204ENST00000526846 POLA1P09884 1462 aaPredicted RBP28.53■■■□□ 2.16
CHD7-204ENST00000526846 ZNF608Q9ULD9 1512 aaPredicted RBP28.48■■■□□ 2.15
CHD7-204ENST00000526846 DNAJC5Q9H3Z4 198 aa28.44■■■□□ 2.14
CHD7-204ENST00000526846 FGD5Q6ZNL6 1462 aa28.44■■■□□ 2.14
CHD7-204ENST00000526846 EIF4G3O43432 1585 aaKnown RBP28.42■■■□□ 2.14
CHD7-204ENST00000526846 RAD54L2Q9Y4B4 1467 aa28.38■■■□□ 2.13
CHD7-204ENST00000526846 BIVM-ERCC5R4GMW8 1640 aa28.36■■■□□ 2.13
CHD7-204ENST00000526846 WDR97A6NE52 1622 aa28.36■■■□□ 2.13
CHD7-204ENST00000526846 SOGA1O94964 1423 aa28.33■■■□□ 2.13
CHD7-204ENST00000526846 TOP2BQ02880 1626 aa28.32■■■□□ 2.12
CHD7-204ENST00000526846 SYNJ1O43426 1573 aa28.32■■■□□ 2.12
CHD7-204ENST00000526846 WRNQ14191 1432 aaPredicted RBP eCLIP28.28■■■□□ 2.12
CHD7-204ENST00000526846 AQRO60306 1485 aaKnown RBP eCLIP28.27■■■□□ 2.12
CHD7-204ENST00000526846 ABCA10Q8WWZ4 1543 aa28.18■■■□□ 2.1
CHD7-204ENST00000526846 TDRD9Q8NDG6 1382 aaKnown RBP28.17■■■□□ 2.1
CHD7-204ENST00000526846 ABCA5Q8WWZ7 1642 aa28.14■■■□□ 2.09
CHD7-204ENST00000526846 PBRM1Q86U86 1689 aa28.12■■■□□ 2.09
CHD7-204ENST00000526846 CHD1O14646 1710 aa28.12■■■□□ 2.09
CHD7-204ENST00000526846 GRIN2BQ13224 1484 aa28.04■■■□□ 2.08
CHD7-204ENST00000526846 GAPVD1Q14C86 1478 aa28.03■■■□□ 2.08
CHD7-204ENST00000526846 SNAPC4Q5SXM2 1469 aa28.03■■■□□ 2.08
CHD7-204ENST00000526846 OSCARQ8IYS5 282 aa28■■■□□ 2.07
CHD7-204ENST00000526846 MAGI1Q96QZ7 1491 aaPredicted RBP28■■■□□ 2.07
CHD7-204ENST00000526846 SYNJ2O15056 1496 aa27.88■■■□□ 2.05
CHD7-204ENST00000526846 ADAMTS12P58397 1594 aa27.86■■■□□ 2.05
CHD7-204ENST00000526846 ERICH3Q5RHP9 1530 aa27.84■■■□□ 2.05
CHD7-204ENST00000526846 FBLN2P98095 1184 aa27.78■■■□□ 2.04
CHD7-204ENST00000526846 CLASP1Q7Z460 1538 aa27.77■■■□□ 2.04
CHD7-204ENST00000526846 RIMBP3CA6NJZ7 1639 aa27.74■■■□□ 2.03
CHD7-204ENST00000526846 RIMBP3BA6NNM3 1639 aa27.74■■■□□ 2.03
CHD7-204ENST00000526846 RIMBP3Q9UFD9 1639 aa27.74■■■□□ 2.03
CHD7-204ENST00000526846 CHMP7Q8WUX9 453 aaPredicted RBP27.74■■■□□ 2.03
CHD7-204ENST00000526846 GRIN2AQ12879 1464 aa27.7■■■□□ 2.03
CHD7-204ENST00000526846 FHAD1B1AJZ9 1412 aa27.7■■■□□ 2.03
CHD7-204ENST00000526846 ARHGEF11O15085 1522 aa27.69■■■□□ 2.02
CHD7-204ENST00000526846 KIF27Q86VH2 1401 aa27.67■■■□□ 2.02
CHD7-204ENST00000526846 CEP170Q5SW79 1584 aa27.63■■■□□ 2.01
CHD7-204ENST00000526846 NUP160Q12769 1436 aa27.61■■■□□ 2.01
CHD7-204ENST00000526846 CUL7Q14999 1698 aa27.61■■■□□ 2.01
CHD7-204ENST00000526846 IGF1RP08069 1367 aa27.59■■■□□ 2.01
CHD7-204ENST00000526846 SHROOM2Q13796 1616 aa27.49■■□□□ 1.99
CHD7-204ENST00000526846 RUSC2Q8N2Y8 1516 aa27.48■■□□□ 1.99
CHD7-204ENST00000526846 ARAP1Q96P48 1450 aa27.48■■□□□ 1.99
CHD7-204ENST00000526846 TRIM41Q8WV44 630 aa27.45■■□□□ 1.98
CHD7-204ENST00000526846 CARMIL1Q5VZK9 1371 aa27.4■■□□□ 1.98
CHD7-204ENST00000526846 ERCC6L2Q5T890 1561 aa27.39■■□□□ 1.97
CHD7-204ENST00000526846 KIAA0586Q9BVV6 1533 aa27.29■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms