RNA–Protein interactions for RNA: ENST00000526817.1

SLC35C1-203, Transcript of solute carrier family 35 member C1, humanhuman

TSL 2

Gene SLC35C1, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC35C1-203ENST00000526817 NISCHQ9Y2I1 1504 aa49.21■■■■■ 5.47
SLC35C1-203ENST00000526817 ABCC9O60706 1549 aa44.91■■■■■ 4.78
SLC35C1-203ENST00000526817 CCDC180Q9P1Z9 1646 aa44.32■■■■■ 4.69
SLC35C1-203ENST00000526817 DNAJC5BQ9UF47 199 aa42.57■■■■■ 4.41
SLC35C1-203ENST00000526817 RB1CC1Q8TDY2 1594 aa42.44■■■■■ 4.39
SLC35C1-203ENST00000526817 NACADO15069 1562 aa42.01■■■■■ 4.32
SLC35C1-203ENST00000526817 DCAF8L2P0C7V8 631 aa41.92■■■■■ 4.3
SLC35C1-203ENST00000526817 PABPN1Q86U42 306 aaKnown RBP eCLIP41.78■■■■■ 4.28
SLC35C1-203ENST00000526817 UNC13AQ9UPW8 1703 aa41.58■■■■■ 4.25
SLC35C1-203ENST00000526817 BICRAQ9NZM4 1560 aa41.26■■■■■ 4.2
SLC35C1-203ENST00000526817 MYO15BQ96JP2 1530 aa41.19■■■■■ 4.18
SLC35C1-203ENST00000526817 ZCCHC6Q5VYS8 1495 aaKnown RBP40.65■■■■■ 4.1
SLC35C1-203ENST00000526817 DCAF1Q9Y4B6 1507 aa40.52■■■■■ 4.08
SLC35C1-203ENST00000526817 CC2D2AQ9P2K1 1620 aa40.51■■■■■ 4.08
SLC35C1-203ENST00000526817 SHROOM4Q9ULL8 1493 aa40.5■■■■■ 4.07
SLC35C1-203ENST00000526817 SCRIBQ14160 1630 aa40.47■■■■■ 4.07
SLC35C1-203ENST00000526817 CECR2Q9BXF3 1484 aa40.45■■■■■ 4.07
SLC35C1-203ENST00000526817 EIF4G1Q04637 1599 aaKnown RBP40.27■■■■■ 4.04
SLC35C1-203ENST00000526817 DNAJC5Q9H3Z4 198 aa39.37■■■■□ 3.89
SLC35C1-203ENST00000526817 NCAPD3P42695 1498 aa38.79■■■■□ 3.8
SLC35C1-203ENST00000526817 CUX2O14529 1486 aa38.78■■■■□ 3.8
SLC35C1-203ENST00000526817 ERCC6Q03468 1493 aa38.78■■■■□ 3.8
SLC35C1-203ENST00000526817 ATAD2BQ9ULI0 1458 aa38.65■■■■□ 3.78
SLC35C1-203ENST00000526817 SMARCA4P51532 1647 aa38.5■■■■□ 3.75
SLC35C1-203ENST00000526817 SMARCA2P51531 1590 aa38.49■■■■□ 3.75
SLC35C1-203ENST00000526817 NESP48681 1621 aa38.45■■■■□ 3.75
SLC35C1-203ENST00000526817 HMGXB3Q12766 1538 aa38.45■■■■□ 3.75
SLC35C1-203ENST00000526817 BAZ1BQ9UIG0 1483 aaKnown RBP38.26■■■■□ 3.72
SLC35C1-203ENST00000526817 BAZ1AQ9NRL2 1556 aaPredicted RBP38.21■■■■□ 3.71
SLC35C1-203ENST00000526817 THOC2Q8NI27 1593 aaKnown RBP38.08■■■■□ 3.69
SLC35C1-203ENST00000526817 PEG3Q9GZU2 1588 aa38.06■■■■□ 3.68
SLC35C1-203ENST00000526817 LAMC3Q9Y6N6 1575 aa38■■■■□ 3.67
SLC35C1-203ENST00000526817 MROH2BQ7Z745 1585 aa37.96■■■■□ 3.67
SLC35C1-203ENST00000526817 KIF21AQ7Z4S6 1674 aa37.94■■■■□ 3.66
SLC35C1-203ENST00000526817 PDS5BQ9NTI5 1447 aa37.8■■■■□ 3.64
SLC35C1-203ENST00000526817 CADPSQ9ULU8 1353 aa37.62■■■■□ 3.61
SLC35C1-203ENST00000526817 TRIM41Q8WV44 630 aa37.56■■■■□ 3.6
SLC35C1-203ENST00000526817 MRC2Q9UBG0 1479 aa37.52■■■■□ 3.6
SLC35C1-203ENST00000526817 WIZO95785 1651 aa37.52■■■■□ 3.6
SLC35C1-203ENST00000526817 WDR62O43379 1518 aa37.43■■■■□ 3.58
SLC35C1-203ENST00000526817 CEP164Q9UPV0 1460 aa37.29■■■■□ 3.56
SLC35C1-203ENST00000526817 FANCD2Q9BXW9 1451 aa37.22■■■■□ 3.55
SLC35C1-203ENST00000526817 CFTRP13569 1480 aa37.08■■■■□ 3.53
SLC35C1-203ENST00000526817 OSCARQ8IYS5 282 aa37.01■■■■□ 3.52
SLC35C1-203ENST00000526817 RSF1Q96T23 1441 aaPredicted RBP36.97■■■■□ 3.51
SLC35C1-203ENST00000526817 URB2Q14146 1524 aaKnown RBP36.96■■■■□ 3.51
SLC35C1-203ENST00000526817 TOP2AP11388 1531 aaKnown RBP36.92■■■■□ 3.5
SLC35C1-203ENST00000526817 PRDM2Q13029 1718 aa36.71■■■■□ 3.47
SLC35C1-203ENST00000526817 ZNF608Q9ULD9 1512 aaPredicted RBP36.61■■■■□ 3.45
SLC35C1-203ENST00000526817 RIMBP3CA6NJZ7 1639 aa36.59■■■■□ 3.45
SLC35C1-203ENST00000526817 RIMBP3BA6NNM3 1639 aa36.59■■■■□ 3.45
SLC35C1-203ENST00000526817 RIMBP3Q9UFD9 1639 aa36.59■■■■□ 3.45
SLC35C1-203ENST00000526817 CCDC88BA6NC98 1476 aa36.56■■■■□ 3.44
SLC35C1-203ENST00000526817 IFT140Q96RY7 1462 aa36.54■■■■□ 3.44
SLC35C1-203ENST00000526817 TOPBP1Q92547 1522 aa36.47■■■■□ 3.43
SLC35C1-203ENST00000526817 ARHGEF11O15085 1522 aa36.4■■■■□ 3.42
SLC35C1-203ENST00000526817 EIF4G3O43432 1585 aaKnown RBP36.35■■■■□ 3.41
SLC35C1-203ENST00000526817 ABCC8Q09428 1581 aa36.28■■■■□ 3.4
SLC35C1-203ENST00000526817 DNMBPQ6XZF7 1577 aa36.27■■■■□ 3.4
SLC35C1-203ENST00000526817 CYB5RLQ6IPT4 315 aa36.24■■■■□ 3.39
SLC35C1-203ENST00000526817 AQRO60306 1485 aaKnown RBP eCLIP36.23■■■■□ 3.39
SLC35C1-203ENST00000526817 CHD1O14646 1710 aa36.22■■■■□ 3.39
SLC35C1-203ENST00000526817 TARBP1Q13395 1621 aaKnown RBP36.18■■■■□ 3.38
SLC35C1-203ENST00000526817 FBLN2P98095 1184 aa36.14■■■■□ 3.38
SLC35C1-203ENST00000526817 POLA1P09884 1462 aaPredicted RBP36.06■■■■□ 3.36
SLC35C1-203ENST00000526817 ARAP1Q96P48 1450 aa36.02■■■■□ 3.36
SLC35C1-203ENST00000526817 TRHP20396 242 aaPredicted RBP36.01■■■■□ 3.36
SLC35C1-203ENST00000526817 RAD54L2Q9Y4B4 1467 aa35.99■■■■□ 3.35
SLC35C1-203ENST00000526817 TDRD9Q8NDG6 1382 aaKnown RBP35.94■■■■□ 3.34
SLC35C1-203ENST00000526817 SOGA1O94964 1423 aa35.91■■■■□ 3.34
SLC35C1-203ENST00000526817 SNAPC4Q5SXM2 1469 aa35.8■■■■□ 3.32
SLC35C1-203ENST00000526817 FGD5Q6ZNL6 1462 aa35.79■■■■□ 3.32
SLC35C1-203ENST00000526817 CHMP7Q8WUX9 453 aaPredicted RBP35.74■■■■□ 3.31
SLC35C1-203ENST00000526817 CLASP1Q7Z460 1538 aa35.71■■■■□ 3.31
SLC35C1-203ENST00000526817 CUX1P39880 1505 aa35.68■■■■□ 3.3
SLC35C1-203ENST00000526817 WDR97A6NE52 1622 aa35.67■■■■□ 3.3
SLC35C1-203ENST00000526817 SYNJ1O43426 1573 aa35.65■■■■□ 3.3
SLC35C1-203ENST00000526817 MAGI1Q96QZ7 1491 aaPredicted RBP35.64■■■■□ 3.3
SLC35C1-203ENST00000526817 GRIN2BQ13224 1484 aa35.61■■■■□ 3.29
SLC35C1-203ENST00000526817 SYNJ2O15056 1496 aa35.54■■■■□ 3.28
SLC35C1-203ENST00000526817 PBRM1Q86U86 1689 aa35.49■■■■□ 3.27
SLC35C1-203ENST00000526817 GAPVD1Q14C86 1478 aa35.45■■■■□ 3.27
SLC35C1-203ENST00000526817 ABCA5Q8WWZ7 1642 aa35.32■■■■□ 3.24
SLC35C1-203ENST00000526817 ABCA10Q8WWZ4 1543 aa35.3■■■■□ 3.24
SLC35C1-203ENST00000526817 AEBP2Q6ZN18 517 aaPredicted RBP35.29■■■■□ 3.24
SLC35C1-203ENST00000526817 ERCC6L2Q5T890 1561 aa35.21■■■■□ 3.23
SLC35C1-203ENST00000526817 GRIN2AQ12879 1464 aa35.16■■■■□ 3.22
SLC35C1-203ENST00000526817 SUPT5HO00267 1087 aaKnown RBP35.13■■■■□ 3.21
SLC35C1-203ENST00000526817 CEP170Q5SW79 1584 aa35.08■■■■□ 3.21
SLC35C1-203ENST00000526817 WRNQ14191 1432 aaPredicted RBP eCLIP35.08■■■■□ 3.21
SLC35C1-203ENST00000526817 ADAMTS12P58397 1594 aa35.08■■■■□ 3.21
SLC35C1-203ENST00000526817 NUP160Q12769 1436 aa35.04■■■■□ 3.2
SLC35C1-203ENST00000526817 BIVM-ERCC5R4GMW8 1640 aa34.96■■■■□ 3.19
SLC35C1-203ENST00000526817 FHAD1B1AJZ9 1412 aa34.95■■■■□ 3.19
SLC35C1-203ENST00000526817 TOP2BQ02880 1626 aa34.95■■■■□ 3.18
SLC35C1-203ENST00000526817 SHROOM2Q13796 1616 aa34.95■■■■□ 3.18
SLC35C1-203ENST00000526817 ERICH3Q5RHP9 1530 aa34.84■■■■□ 3.17
SLC35C1-203ENST00000526817 KIF13AQ9H1H9 1805 aa34.81■■■■□ 3.16
SLC35C1-203ENST00000526817 PRG4Q92954 1404 aaPredicted RBP34.81■■■■□ 3.16
SLC35C1-203ENST00000526817 JPH4Q96JJ6 628 aa34.74■■■■□ 3.15
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms