RNA–Protein interactions for RNA: ENST00000526593.1

PPP6R3-212, Transcript of protein phosphatase 6 regulatory subunit 3, humanhuman

TSL 4

Gene PPP6R3, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP6R3-212ENST00000526593 NISCHQ9Y2I1 1504 aa35.97■■■■□ 3.35
PPP6R3-212ENST00000526593 ABCC9O60706 1549 aa32.46■■■□□ 2.79
PPP6R3-212ENST00000526593 CCDC180Q9P1Z9 1646 aa32.33■■■□□ 2.77
PPP6R3-212ENST00000526593 RB1CC1Q8TDY2 1594 aa30.88■■■□□ 2.53
PPP6R3-212ENST00000526593 DNAJC5BQ9UF47 199 aa30.74■■■□□ 2.51
PPP6R3-212ENST00000526593 NACADO15069 1562 aa30.67■■■□□ 2.5
PPP6R3-212ENST00000526593 DCAF8L2P0C7V8 631 aa30.31■■■□□ 2.44
PPP6R3-212ENST00000526593 MYO15BQ96JP2 1530 aa30.29■■■□□ 2.44
PPP6R3-212ENST00000526593 PABPN1Q86U42 306 aaKnown RBP eCLIP30.21■■■□□ 2.43
PPP6R3-212ENST00000526593 UNC13AQ9UPW8 1703 aa30.08■■■□□ 2.41
PPP6R3-212ENST00000526593 BICRAQ9NZM4 1560 aa30■■■□□ 2.39
PPP6R3-212ENST00000526593 DCAF1Q9Y4B6 1507 aa29.79■■■□□ 2.36
PPP6R3-212ENST00000526593 ZCCHC6Q5VYS8 1495 aaKnown RBP29.75■■■□□ 2.35
PPP6R3-212ENST00000526593 SHROOM4Q9ULL8 1493 aa29.7■■■□□ 2.35
PPP6R3-212ENST00000526593 CC2D2AQ9P2K1 1620 aa29.34■■■□□ 2.29
PPP6R3-212ENST00000526593 CECR2Q9BXF3 1484 aa29.33■■■□□ 2.29
PPP6R3-212ENST00000526593 SCRIBQ14160 1630 aa29.33■■■□□ 2.29
PPP6R3-212ENST00000526593 EIF4G1Q04637 1599 aaKnown RBP29.26■■■□□ 2.28
PPP6R3-212ENST00000526593 DNAJC5Q9H3Z4 198 aa28.45■■■□□ 2.14
PPP6R3-212ENST00000526593 NCAPD3P42695 1498 aa28.37■■■□□ 2.13
PPP6R3-212ENST00000526593 CUX2O14529 1486 aa28.19■■■□□ 2.1
PPP6R3-212ENST00000526593 ATAD2BQ9ULI0 1458 aa28.19■■■□□ 2.1
PPP6R3-212ENST00000526593 SMARCA2P51531 1590 aa28.09■■■□□ 2.09
PPP6R3-212ENST00000526593 HMGXB3Q12766 1538 aa28.08■■■□□ 2.09
PPP6R3-212ENST00000526593 ERCC6Q03468 1493 aa28.05■■■□□ 2.08
PPP6R3-212ENST00000526593 SMARCA4P51532 1647 aa28.04■■■□□ 2.08
PPP6R3-212ENST00000526593 BAZ1AQ9NRL2 1556 aaPredicted RBP27.92■■■□□ 2.06
PPP6R3-212ENST00000526593 PEG3Q9GZU2 1588 aa27.88■■■□□ 2.05
PPP6R3-212ENST00000526593 BAZ1BQ9UIG0 1483 aaKnown RBP27.85■■■□□ 2.05
PPP6R3-212ENST00000526593 NESP48681 1621 aa27.84■■■□□ 2.05
PPP6R3-212ENST00000526593 LAMC3Q9Y6N6 1575 aa27.69■■■□□ 2.02
PPP6R3-212ENST00000526593 MROH2BQ7Z745 1585 aa27.66■■■□□ 2.02
PPP6R3-212ENST00000526593 THOC2Q8NI27 1593 aaKnown RBP27.61■■■□□ 2.01
PPP6R3-212ENST00000526593 PDS5BQ9NTI5 1447 aa27.57■■■□□ 2
PPP6R3-212ENST00000526593 CADPSQ9ULU8 1353 aa27.47■■□□□ 1.99
PPP6R3-212ENST00000526593 KIF21AQ7Z4S6 1674 aa27.42■■□□□ 1.98
PPP6R3-212ENST00000526593 MRC2Q9UBG0 1479 aa27.29■■□□□ 1.96
PPP6R3-212ENST00000526593 WIZO95785 1651 aa27.26■■□□□ 1.95
PPP6R3-212ENST00000526593 WDR62O43379 1518 aa27.25■■□□□ 1.95
PPP6R3-212ENST00000526593 CEP164Q9UPV0 1460 aa27.13■■□□□ 1.93
PPP6R3-212ENST00000526593 CFTRP13569 1480 aa27.11■■□□□ 1.93
PPP6R3-212ENST00000526593 FANCD2Q9BXW9 1451 aa27.09■■□□□ 1.93
PPP6R3-212ENST00000526593 RSF1Q96T23 1441 aaPredicted RBP27.07■■□□□ 1.92
PPP6R3-212ENST00000526593 TOP2AP11388 1531 aaKnown RBP26.97■■□□□ 1.91
PPP6R3-212ENST00000526593 TRIM41Q8WV44 630 aa26.92■■□□□ 1.9
PPP6R3-212ENST00000526593 OSCARQ8IYS5 282 aa26.88■■□□□ 1.89
PPP6R3-212ENST00000526593 URB2Q14146 1524 aaKnown RBP26.87■■□□□ 1.89
PPP6R3-212ENST00000526593 CCDC88BA6NC98 1476 aa26.68■■□□□ 1.86
PPP6R3-212ENST00000526593 PRDM2Q13029 1718 aa26.67■■□□□ 1.86
PPP6R3-212ENST00000526593 IFT140Q96RY7 1462 aa26.64■■□□□ 1.86
PPP6R3-212ENST00000526593 ABCC8Q09428 1581 aa26.56■■□□□ 1.84
PPP6R3-212ENST00000526593 TOPBP1Q92547 1522 aa26.55■■□□□ 1.84
PPP6R3-212ENST00000526593 ZNF608Q9ULD9 1512 aaPredicted RBP26.55■■□□□ 1.84
PPP6R3-212ENST00000526593 RIMBP3CA6NJZ7 1639 aa26.43■■□□□ 1.82
PPP6R3-212ENST00000526593 RIMBP3BA6NNM3 1639 aa26.43■■□□□ 1.82
PPP6R3-212ENST00000526593 RIMBP3Q9UFD9 1639 aa26.43■■□□□ 1.82
PPP6R3-212ENST00000526593 DNMBPQ6XZF7 1577 aa26.42■■□□□ 1.82
PPP6R3-212ENST00000526593 ARHGEF11O15085 1522 aa26.37■■□□□ 1.81
PPP6R3-212ENST00000526593 EIF4G3O43432 1585 aaKnown RBP26.36■■□□□ 1.81
PPP6R3-212ENST00000526593 TARBP1Q13395 1621 aaKnown RBP26.33■■□□□ 1.81
PPP6R3-212ENST00000526593 AQRO60306 1485 aaKnown RBP eCLIP26.3■■□□□ 1.82e-9■■■■■ 28.1
PPP6R3-212ENST00000526593 POLA1P09884 1462 aaPredicted RBP26.27■■□□□ 1.8
PPP6R3-212ENST00000526593 CYB5RLQ6IPT4 315 aa26.19■■□□□ 1.78
PPP6R3-212ENST00000526593 SOGA1O94964 1423 aa26.16■■□□□ 1.78
PPP6R3-212ENST00000526593 CHD1O14646 1710 aa26.16■■□□□ 1.78
PPP6R3-212ENST00000526593 RAD54L2Q9Y4B4 1467 aa26.14■■□□□ 1.78
PPP6R3-212ENST00000526593 WDR97A6NE52 1622 aa26.12■■□□□ 1.77
PPP6R3-212ENST00000526593 TDRD9Q8NDG6 1382 aaKnown RBP26.11■■□□□ 1.77
PPP6R3-212ENST00000526593 FBLN2P98095 1184 aa26.11■■□□□ 1.77
PPP6R3-212ENST00000526593 ARAP1Q96P48 1450 aa26.1■■□□□ 1.77
PPP6R3-212ENST00000526593 FGD5Q6ZNL6 1462 aa26.04■■□□□ 1.76
PPP6R3-212ENST00000526593 SNAPC4Q5SXM2 1469 aa26■■□□□ 1.75
PPP6R3-212ENST00000526593 MAGI1Q96QZ7 1491 aaPredicted RBP26■■□□□ 1.75
PPP6R3-212ENST00000526593 CUX1P39880 1505 aa25.99■■□□□ 1.75
PPP6R3-212ENST00000526593 CLASP1Q7Z460 1538 aa25.98■■□□□ 1.75
PPP6R3-212ENST00000526593 CHMP7Q8WUX9 453 aaPredicted RBP25.97■■□□□ 1.75
PPP6R3-212ENST00000526593 GRIN2BQ13224 1484 aa25.97■■□□□ 1.75
PPP6R3-212ENST00000526593 SYNJ1O43426 1573 aa25.91■■□□□ 1.74
PPP6R3-212ENST00000526593 TRHP20396 242 aaPredicted RBP25.91■■□□□ 1.74
PPP6R3-212ENST00000526593 SYNJ2O15056 1496 aa25.91■■□□□ 1.74
PPP6R3-212ENST00000526593 GAPVD1Q14C86 1478 aa25.83■■□□□ 1.73
PPP6R3-212ENST00000526593 ABCA10Q8WWZ4 1543 aa25.81■■□□□ 1.72
PPP6R3-212ENST00000526593 ABCA5Q8WWZ7 1642 aa25.73■■□□□ 1.71
PPP6R3-212ENST00000526593 PBRM1Q86U86 1689 aa25.72■■□□□ 1.71
PPP6R3-212ENST00000526593 WRNQ14191 1432 aaPredicted RBP eCLIP25.66■■□□□ 1.7
PPP6R3-212ENST00000526593 GRIN2AQ12879 1464 aa25.61■■□□□ 1.69
PPP6R3-212ENST00000526593 NUP160Q12769 1436 aa25.59■■□□□ 1.69
PPP6R3-212ENST00000526593 SUPT5HO00267 1087 aaKnown RBP25.57■■□□□ 1.68
PPP6R3-212ENST00000526593 TOP2BQ02880 1626 aa25.55■■□□□ 1.68
PPP6R3-212ENST00000526593 FHAD1B1AJZ9 1412 aa25.53■■□□□ 1.68
PPP6R3-212ENST00000526593 ADAMTS12P58397 1594 aa25.52■■□□□ 1.68
PPP6R3-212ENST00000526593 BIVM-ERCC5R4GMW8 1640 aa25.52■■□□□ 1.68
PPP6R3-212ENST00000526593 CEP170Q5SW79 1584 aa25.49■■□□□ 1.67
PPP6R3-212ENST00000526593 ERCC6L2Q5T890 1561 aa25.48■■□□□ 1.67
PPP6R3-212ENST00000526593 ERICH3Q5RHP9 1530 aa25.47■■□□□ 1.67
PPP6R3-212ENST00000526593 SHROOM2Q13796 1616 aa25.45■■□□□ 1.67
PPP6R3-212ENST00000526593 JPH4Q96JJ6 628 aa25.32■■□□□ 1.64
PPP6R3-212ENST00000526593 AEBP2Q6ZN18 517 aaPredicted RBP25.31■■□□□ 1.64
PPP6R3-212ENST00000526593 PRG4Q92954 1404 aaPredicted RBP25.3■■□□□ 1.64
PPP6R3-212ENST00000526593 RUSC2Q8N2Y8 1516 aa25.17■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms