RNA–Protein interactions for RNA: ENST00000526578.5

VPS51-202, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 2

Gene VPS51, Length 534 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-202ENST00000526578 NISCHQ9Y2I1 1504 aa51.61■■■■■ 5.85
VPS51-202ENST00000526578 ABCC9O60706 1549 aa47.25■■■■■ 5.16
VPS51-202ENST00000526578 CCDC180Q9P1Z9 1646 aa46.71■■■■■ 5.07
VPS51-202ENST00000526578 DNAJC5BQ9UF47 199 aa44.93■■■■■ 4.78
VPS51-202ENST00000526578 RB1CC1Q8TDY2 1594 aa44.77■■■■■ 4.76
VPS51-202ENST00000526578 NACADO15069 1562 aa44.31■■■■■ 4.68
VPS51-202ENST00000526578 PABPN1Q86U42 306 aaKnown RBP eCLIP43.83■■■■■ 4.61
VPS51-202ENST00000526578 UNC13AQ9UPW8 1703 aa43.76■■■■■ 4.6
VPS51-202ENST00000526578 DCAF8L2P0C7V8 631 aa43.74■■■■■ 4.59
VPS51-202ENST00000526578 MYO15BQ96JP2 1530 aa43.51■■■■■ 4.56
VPS51-202ENST00000526578 BICRAQ9NZM4 1560 aa43.46■■■■■ 4.55
VPS51-202ENST00000526578 SHROOM4Q9ULL8 1493 aa42.91■■■■■ 4.46
VPS51-202ENST00000526578 CC2D2AQ9P2K1 1620 aa42.71■■■■■ 4.43
VPS51-202ENST00000526578 CECR2Q9BXF3 1484 aa42.68■■■■■ 4.42
VPS51-202ENST00000526578 DCAF1Q9Y4B6 1507 aa42.66■■■■■ 4.42
VPS51-202ENST00000526578 ZCCHC6Q5VYS8 1495 aaKnown RBP42.63■■■■■ 4.42
VPS51-202ENST00000526578 EIF4G1Q04637 1599 aaKnown RBP42.46■■■■■ 4.39
VPS51-202ENST00000526578 SCRIBQ14160 1630 aa42.39■■■■■ 4.38
VPS51-202ENST00000526578 DNAJC5Q9H3Z4 198 aa41.86■■■■■ 4.29
VPS51-202ENST00000526578 CUX2O14529 1486 aa41.13■■■■■ 4.17
VPS51-202ENST00000526578 NCAPD3P42695 1498 aa40.89■■■■■ 4.14
VPS51-202ENST00000526578 ERCC6Q03468 1493 aa40.89■■■■■ 4.14
VPS51-202ENST00000526578 ATAD2BQ9ULI0 1458 aa40.63■■■■■ 4.09
VPS51-202ENST00000526578 HMGXB3Q12766 1538 aa40.54■■■■■ 4.08
VPS51-202ENST00000526578 SMARCA2P51531 1590 aa40.52■■■■■ 4.08
VPS51-202ENST00000526578 SMARCA4P51532 1647 aa40.42■■■■■ 4.06
VPS51-202ENST00000526578 NESP48681 1621 aa40.38■■■■■ 4.06
VPS51-202ENST00000526578 THOC2Q8NI27 1593 aaKnown RBP40.2■■■■■ 4.03
VPS51-202ENST00000526578 BAZ1BQ9UIG0 1483 aaKnown RBP40.19■■■■■ 4.03
VPS51-202ENST00000526578 BAZ1AQ9NRL2 1556 aaPredicted RBP40.14■■■■■ 4.02
VPS51-202ENST00000526578 LAMC3Q9Y6N6 1575 aa40.1■■■■■ 4.01
VPS51-202ENST00000526578 PEG3Q9GZU2 1588 aa40.09■■■■■ 4.01
VPS51-202ENST00000526578 KIF21AQ7Z4S6 1674 aa39.91■■■■□ 3.98
VPS51-202ENST00000526578 PDS5BQ9NTI5 1447 aa39.87■■■■□ 3.97
VPS51-202ENST00000526578 MROH2BQ7Z745 1585 aa39.72■■■■□ 3.95
VPS51-202ENST00000526578 TRIM41Q8WV44 630 aa39.63■■■■□ 3.93
VPS51-202ENST00000526578 CADPSQ9ULU8 1353 aa39.59■■■■□ 3.93
VPS51-202ENST00000526578 MRC2Q9UBG0 1479 aa39.55■■■■□ 3.92
VPS51-202ENST00000526578 WDR62O43379 1518 aa39.5■■■■□ 3.91
VPS51-202ENST00000526578 CEP164Q9UPV0 1460 aa39.25■■■■□ 3.87
VPS51-202ENST00000526578 WIZO95785 1651 aa39.22■■■■□ 3.87
VPS51-202ENST00000526578 FANCD2Q9BXW9 1451 aa39.12■■■■□ 3.85
VPS51-202ENST00000526578 OSCARQ8IYS5 282 aa39.08■■■■□ 3.85
VPS51-202ENST00000526578 CFTRP13569 1480 aa39■■■■□ 3.83
VPS51-202ENST00000526578 URB2Q14146 1524 aaKnown RBP38.84■■■■□ 3.81
VPS51-202ENST00000526578 TOP2AP11388 1531 aaKnown RBP38.71■■■■□ 3.79
VPS51-202ENST00000526578 RIMBP3CA6NJZ7 1639 aa38.66■■■■□ 3.78
VPS51-202ENST00000526578 RIMBP3BA6NNM3 1639 aa38.66■■■■□ 3.78
VPS51-202ENST00000526578 RIMBP3Q9UFD9 1639 aa38.66■■■■□ 3.78
VPS51-202ENST00000526578 RSF1Q96T23 1441 aaPredicted RBP38.64■■■■□ 3.78
VPS51-202ENST00000526578 PRDM2Q13029 1718 aa38.63■■■■□ 3.77
VPS51-202ENST00000526578 IFT140Q96RY7 1462 aa38.5■■■■□ 3.75
VPS51-202ENST00000526578 ARHGEF11O15085 1522 aa38.46■■■■□ 3.75
VPS51-202ENST00000526578 ZNF608Q9ULD9 1512 aaPredicted RBP38.45■■■■□ 3.75
VPS51-202ENST00000526578 TOPBP1Q92547 1522 aa38.31■■■■□ 3.72
VPS51-202ENST00000526578 EIF4G3O43432 1585 aaKnown RBP38.26■■■■□ 3.72
VPS51-202ENST00000526578 ABCC8Q09428 1581 aa38.25■■■■□ 3.71
VPS51-202ENST00000526578 CCDC88BA6NC98 1476 aa38.24■■■■□ 3.71
VPS51-202ENST00000526578 CYB5RLQ6IPT4 315 aa38.15■■■■□ 3.7
VPS51-202ENST00000526578 DNMBPQ6XZF7 1577 aa38.13■■■■□ 3.69
VPS51-202ENST00000526578 CHD1O14646 1710 aa38.12■■■■□ 3.69
VPS51-202ENST00000526578 TARBP1Q13395 1621 aaKnown RBP38.05■■■■□ 3.68
VPS51-202ENST00000526578 ARAP1Q96P48 1450 aa38.02■■■■□ 3.68
VPS51-202ENST00000526578 AQRO60306 1485 aaKnown RBP eCLIP38.01■■■■□ 3.673e-7■■■■□ 21.2
VPS51-202ENST00000526578 TRHP20396 242 aaPredicted RBP37.96■■■■□ 3.67
VPS51-202ENST00000526578 FBLN2P98095 1184 aa37.87■■■■□ 3.65
VPS51-202ENST00000526578 POLA1P09884 1462 aaPredicted RBP37.86■■■■□ 3.65
VPS51-202ENST00000526578 RAD54L2Q9Y4B4 1467 aa37.7■■■■□ 3.63
VPS51-202ENST00000526578 WDR97A6NE52 1622 aa37.69■■■■□ 3.62
VPS51-202ENST00000526578 SOGA1O94964 1423 aa37.67■■■■□ 3.62
VPS51-202ENST00000526578 CLASP1Q7Z460 1538 aa37.66■■■■□ 3.62
VPS51-202ENST00000526578 TDRD9Q8NDG6 1382 aaKnown RBP37.66■■■■□ 3.62
VPS51-202ENST00000526578 SNAPC4Q5SXM2 1469 aa37.63■■■■□ 3.61
VPS51-202ENST00000526578 SYNJ1O43426 1573 aa37.59■■■■□ 3.61
VPS51-202ENST00000526578 MAGI1Q96QZ7 1491 aaPredicted RBP37.56■■■■□ 3.6
VPS51-202ENST00000526578 CHMP7Q8WUX9 453 aaPredicted RBP37.53■■■■□ 3.6
VPS51-202ENST00000526578 FGD5Q6ZNL6 1462 aa37.52■■■■□ 3.6
VPS51-202ENST00000526578 GRIN2BQ13224 1484 aa37.45■■■■□ 3.59
VPS51-202ENST00000526578 SYNJ2O15056 1496 aa37.43■■■■□ 3.58
VPS51-202ENST00000526578 AEBP2Q6ZN18 517 aaPredicted RBP37.41■■■■□ 3.58
VPS51-202ENST00000526578 CUX1P39880 1505 aa37.37■■■■□ 3.57
VPS51-202ENST00000526578 PBRM1Q86U86 1689 aa37.28■■■■□ 3.56
VPS51-202ENST00000526578 GAPVD1Q14C86 1478 aa37.28■■■■□ 3.56
VPS51-202ENST00000526578 ABCA5Q8WWZ7 1642 aa37.1■■■■□ 3.53
VPS51-202ENST00000526578 ABCA10Q8WWZ4 1543 aa37.09■■■■□ 3.53
VPS51-202ENST00000526578 GRIN2AQ12879 1464 aa36.97■■■■□ 3.51
VPS51-202ENST00000526578 ERCC6L2Q5T890 1561 aa36.95■■■■□ 3.51
VPS51-202ENST00000526578 CEP170Q5SW79 1584 aa36.9■■■■□ 3.5
VPS51-202ENST00000526578 NUP160Q12769 1436 aa36.88■■■■□ 3.49
VPS51-202ENST00000526578 ADAMTS12P58397 1594 aa36.87■■■■□ 3.49
VPS51-202ENST00000526578 SHROOM2Q13796 1616 aa36.84■■■■□ 3.49
VPS51-202ENST00000526578 WRNQ14191 1432 aaPredicted RBP eCLIP36.78■■■■□ 3.48
VPS51-202ENST00000526578 KIF13AQ9H1H9 1805 aa36.73■■■■□ 3.47
VPS51-202ENST00000526578 FHAD1B1AJZ9 1412 aa36.73■■■■□ 3.47
VPS51-202ENST00000526578 BIVM-ERCC5R4GMW8 1640 aa36.65■■■■□ 3.46
VPS51-202ENST00000526578 ERICH3Q5RHP9 1530 aa36.64■■■■□ 3.46
VPS51-202ENST00000526578 TOP2BQ02880 1626 aa36.63■■■■□ 3.45
VPS51-202ENST00000526578 PRG4Q92954 1404 aaPredicted RBP36.55■■■■□ 3.44
VPS51-202ENST00000526578 JPH4Q96JJ6 628 aa36.47■■■■□ 3.43
VPS51-202ENST00000526578 ABCC10Q5T3U5 1492 aa36.43■■■■□ 3.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms