RNA–Protein interactions for RNA: ENST00000526567.5

ATM-209, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best) BASIC

Gene ATM, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-209ENST00000526567 NISCHQ9Y2I1 1504 aa20.88■□□□□ 0.93
ATM-209ENST00000526567 AEBP2Q6ZN18 517 aaPredicted RBP20.49■□□□□ 0.87
ATM-209ENST00000526567 CHIC1Q5VXU3 224 aa19.46■□□□□ 0.71
ATM-209ENST00000526567 CCDC180Q9P1Z9 1646 aa18.31■□□□□ 0.52
ATM-209ENST00000526567 SENP3Q9H4L4 574 aaPredicted RBP17.7■□□□□ 0.42
ATM-209ENST00000526567 ZCCHC6Q5VYS8 1495 aaKnown RBP17.53■□□□□ 0.4
ATM-209ENST00000526567 ABCC9O60706 1549 aa17.5■□□□□ 0.39
ATM-209ENST00000526567 PHF23Q9BUL5 403 aaPredicted RBP17.4■□□□□ 0.38
ATM-209ENST00000526567 DCAF1Q9Y4B6 1507 aa17.26■□□□□ 0.35
ATM-209ENST00000526567 DCAF8L2P0C7V8 631 aa17.21■□□□□ 0.35
ATM-209ENST00000526567 MYO15BQ96JP2 1530 aa17.13■□□□□ 0.33
ATM-209ENST00000526567 NACADO15069 1562 aa17.08■□□□□ 0.32
ATM-209ENST00000526567 RB1CC1Q8TDY2 1594 aa16.98■□□□□ 0.31
ATM-209ENST00000526567 SHROOM4Q9ULL8 1493 aa16.88■□□□□ 0.29
ATM-209ENST00000526567 SCRIBQ14160 1630 aa16.83■□□□□ 0.28
ATM-209ENST00000526567 UNC13AQ9UPW8 1703 aa16.67■□□□□ 0.26
ATM-209ENST00000526567 BICRAQ9NZM4 1560 aa16.53■□□□□ 0.24
ATM-209ENST00000526567 PABPN1Q86U42 306 aaKnown RBP eCLIP16.44■□□□□ 0.22
ATM-209ENST00000526567 FOXD1Q16676 465 aa16.4■□□□□ 0.22
ATM-209ENST00000526567 CECR2Q9BXF3 1484 aa16.27■□□□□ 0.19
ATM-209ENST00000526567 MROH2BQ7Z745 1585 aa16.14■□□□□ 0.17
ATM-209ENST00000526567 BAZ1AQ9NRL2 1556 aaPredicted RBP16.13■□□□□ 0.17
ATM-209ENST00000526567 SMARCA4P51532 1647 aa16.12■□□□□ 0.17
ATM-209ENST00000526567 RSF1Q96T23 1441 aaPredicted RBP16.11■□□□□ 0.17
ATM-209ENST00000526567 SUPT5HO00267 1087 aaKnown RBP16.08■□□□□ 0.16
ATM-209ENST00000526567 EIF4G1Q04637 1599 aaKnown RBP16.03■□□□□ 0.16
ATM-209ENST00000526567 WIZO95785 1651 aa15.99■□□□□ 0.15
ATM-209ENST00000526567 PEG3Q9GZU2 1588 aa15.92■□□□□ 0.14
ATM-209ENST00000526567 ATAD2BQ9ULI0 1458 aa15.89■□□□□ 0.13
ATM-209ENST00000526567 SMARCA2P51531 1590 aa15.85■□□□□ 0.13
ATM-209ENST00000526567 TOP2AP11388 1531 aaKnown RBP15.84■□□□□ 0.13
ATM-209ENST00000526567 CC2D2AQ9P2K1 1620 aa15.83■□□□□ 0.13
ATM-209ENST00000526567 BAZ1BQ9UIG0 1483 aaKnown RBP15.78■□□□□ 0.12
ATM-209ENST00000526567 NCAPD3P42695 1498 aa15.77■□□□□ 0.11
ATM-209ENST00000526567 HMGXB3Q12766 1538 aa15.75■□□□□ 0.11
ATM-209ENST00000526567 CCDC88BA6NC98 1476 aa15.65■□□□□ 0.1
ATM-209ENST00000526567 DNAJC5BQ9UF47 199 aa15.61■□□□□ 0.09
ATM-209ENST00000526567 PLPPR3Q6T4P5 718 aa15.59■□□□□ 0.09
ATM-209ENST00000526567 MSH5O43196 834 aa15.53■□□□□ 0.08
ATM-209ENST00000526567 PIAS4Q8N2W9 510 aaPredicted RBP15.37■□□□□ 0.05
ATM-209ENST00000526567 CFTRP13569 1480 aa15.37■□□□□ 0.05
ATM-209ENST00000526567 CADPSQ9ULU8 1353 aa15.34■□□□□ 0.05
ATM-209ENST00000526567 NESP48681 1621 aa15.32■□□□□ 0.04
ATM-209ENST00000526567 PRDM2Q13029 1718 aa15.28■□□□□ 0.04
ATM-209ENST00000526567 ABCC8Q09428 1581 aa15.28■□□□□ 0.04
ATM-209ENST00000526567 LAMC3Q9Y6N6 1575 aa15.27■□□□□ 0.03
ATM-209ENST00000526567 POTEDQ86YR6 584 aa15.24■□□□□ 0.03
ATM-209ENST00000526567 FANCD2Q9BXW9 1451 aa15.19■□□□□ 0.02
ATM-209ENST00000526567 ADRA2BP18089 450 aa15.18■□□□□ 0.02
ATM-209ENST00000526567 PPP6R1Q9UPN7 881 aa15.18■□□□□ 0.02
ATM-209ENST00000526567 WRNQ14191 1432 aaPredicted RBP eCLIP15.17■□□□□ 0.02
ATM-209ENST00000526567 SYNJ1O43426 1573 aa15.16■□□□□ 0.02
ATM-209ENST00000526567 KIF21AQ7Z4S6 1674 aa15.12■□□□□ 0.01
ATM-209ENST00000526567 PDS5BQ9NTI5 1447 aa15.12■□□□□ 0.01
ATM-209ENST00000526567 TRIM41Q8WV44 630 aa15.11■□□□□ 0.01
ATM-209ENST00000526567 CEP164Q9UPV0 1460 aa15.11■□□□□ 0.01
ATM-209ENST00000526567 CUX1P39880 1505 aa15.11■□□□□ 0.01
ATM-209ENST00000526567 TOP2BQ02880 1626 aa15.09■□□□□ 0.01
ATM-209ENST00000526567 BIVM-ERCC5R4GMW8 1640 aa15.09■□□□□ 0.01
ATM-209ENST00000526567 URB2Q14146 1524 aaKnown RBP15.04■□□□□ -0
ATM-209ENST00000526567 DNMBPQ6XZF7 1577 aa15.02■□□□□ -0
ATM-209ENST00000526567 TOPBP1Q92547 1522 aa15.01□□□□□ -0.01
ATM-209ENST00000526567 MRC2Q9UBG0 1479 aa15□□□□□ -0.01
ATM-209ENST00000526567 ERCC6Q03468 1493 aa14.99□□□□□ -0.01
ATM-209ENST00000526567 FGD5Q6ZNL6 1462 aa14.97□□□□□ -0.01
ATM-209ENST00000526567 THOC2Q8NI27 1593 aaKnown RBP14.96□□□□□ -0.01
ATM-209ENST00000526567 WDR62O43379 1518 aa14.94□□□□□ -0.02
ATM-209ENST00000526567 POLA1P09884 1462 aaPredicted RBP14.93□□□□□ -0.02
ATM-209ENST00000526567 SOGA1O94964 1423 aa14.92□□□□□ -0.02
ATM-209ENST00000526567 RUSC2Q8N2Y8 1516 aa14.9□□□□□ -0.02
ATM-209ENST00000526567 RAD54L2Q9Y4B4 1467 aa14.88□□□□□ -0.03
ATM-209ENST00000526567 FAM9AQ8IZU1 332 aaPredicted RBP14.86□□□□□ -0.03
ATM-209ENST00000526567 CUX2O14529 1486 aa14.84□□□□□ -0.03
ATM-209ENST00000526567 WDR97A6NE52 1622 aa14.84□□□□□ -0.03
ATM-209ENST00000526567 ABCA10Q8WWZ4 1543 aa14.82□□□□□ -0.04
ATM-209ENST00000526567 TARBP1Q13395 1621 aaKnown RBP14.82□□□□□ -0.04
ATM-209ENST00000526567 EEA1Q15075 1411 aa14.81□□□□□ -0.04
ATM-209ENST00000526567 KIF27Q86VH2 1401 aa14.78□□□□□ -0.04
ATM-209ENST00000526567 IFT140Q96RY7 1462 aa14.76□□□□□ -0.05
ATM-209ENST00000526567 ABCA5Q8WWZ7 1642 aa14.75□□□□□ -0.05
ATM-209ENST00000526567 TDRD9Q8NDG6 1382 aaKnown RBP14.73□□□□□ -0.05
ATM-209ENST00000526567 CSRNP3Q8WYN3 585 aa14.72□□□□□ -0.05
ATM-209ENST00000526567 ZNF608Q9ULD9 1512 aaPredicted RBP14.71□□□□□ -0.05
ATM-209ENST00000526567 LOC105371045A0A1W2PR82 267 aa14.7□□□□□ -0.06
ATM-209ENST00000526567 KIF21BO75037 1637 aa14.68□□□□□ -0.06
ATM-209ENST00000526567 IGF1RP08069 1367 aa14.68□□□□□ -0.06
ATM-209ENST00000526567 AQRO60306 1485 aaKnown RBP eCLIP14.68□□□□□ -0.06
ATM-209ENST00000526567 GAPVD1Q14C86 1478 aa14.68□□□□□ -0.06
ATM-209ENST00000526567 EHMT2Q96KQ7 1210 aa14.67□□□□□ -0.06
ATM-209ENST00000526567 EIF4G3O43432 1585 aaKnown RBP14.67□□□□□ -0.06
ATM-209ENST00000526567 PRXQ9BXM0 1461 aa14.66□□□□□ -0.06
ATM-209ENST00000526567 PBRM1Q86U86 1689 aa14.65□□□□□ -0.06
ATM-209ENST00000526567 RAPGEF2Q9Y4G8 1499 aa14.64□□□□□ -0.07
ATM-209ENST00000526567 ERICH3Q5RHP9 1530 aa14.63□□□□□ -0.07
ATM-209ENST00000526567 GOLGA3Q08378 1498 aa14.63□□□□□ -0.07
ATM-209ENST00000526567 GRIN2BQ13224 1484 aa14.6□□□□□ -0.07
ATM-209ENST00000526567 CUL7Q14999 1698 aa14.6□□□□□ -0.07
ATM-209ENST00000526567 CARMIL1Q5VZK9 1371 aa14.59□□□□□ -0.07
ATM-209ENST00000526567 ADAMTS12P58397 1594 aa14.58□□□□□ -0.08
ATM-209ENST00000526567 SNAPC4Q5SXM2 1469 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms